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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g07970.t01
CDS Infomation

cds chromosome:12X:6:8696268:8697815:-1 gene:VIT_06s0004g07970 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6GUB7]
Sequence

ATGGCCAACCGACCATCTCCATTTGGCCTCTTCTTCTTCTTCGCTTTCTTCACTCTACAA
ATGCTCGCAGCCTCCGCCGACTACAGTGGCTGGGAGGGCGGCCACGCCACCTTCTACGGC
GGCGGTGACGCCTCCGGCACAATGGGAGGAGCGTGTGGGTATGGGAACTTGTACAGCCAG
GGGTACGGAACCAACACAGCGGCGCTGAGCACCGCGCTGTTCAACAATGGGCTGAGCTGC
GGAGCTTGTTTCGAAATGCGATGCGACAACGACCCCAGGTGGTGCCTCCCTGGCTCCATC
ACCGTCACTGCAACCAACTTTTGCCCCCCCAACTTCGCTTTGGCCAACAACAATGGCGGG
TGGTGCAACCCTCCTCTCCAACACTTCGACCTCGCGGAGCCTGCCTTCCTCCAAATTGCA
CAGTACCGCGCTGGCATCGTCCCTGTTGCCTTCAGAAGGGTACCATGTGCGAAGAAAGGA
GGAATCAGATTCACCATCAATGGCCACAAATACTTCATCCTAGTCCTGGTAACCAACGTC
GCCGGCGCCGGCGACATCCACTCCGTCTCCATCAAGGGTTCCCGAACAGGGTGGCAAACC
ATGTCAAGAAACTGGGGCCAAAACTGGCAGAGCAACTCCGTTCTCAACGGCCAGAGCCTG
TCCTTCATGGTCACCGCCGGCGACGGCAGAACCGTCACAAGCTTCAACGTCGCCCCGTCC
GGCTGGCAGTTTGGCCGGACCTACGAGGGTAGCCAATTTTAG

Peptide Sequence

PEP ID

VIT_06s0004g07970.t01
PEP Infomation

pep chromosome:12X:6:8696268:8697815:-1 gene:VIT_06s0004g07970 transcript:VIT_06s0004g07970.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6GUB7]
Sequence

MANRPSPFGLFFFFAFFTLQMLAASADYSGWEGGHATFYGGGDASGTMGGACGYGNLYSQ
GYGTNTAALSTALFNNGLSCGACFEMRCDNDPRWCLPGSITVTATNFCPPNFALANNNGG
WCNPPLQHFDLAEPAFLQIAQYRAGIVPVAFRRVPCAKKGGIRFTINGHKYFILVLVTNV
AGAGDIHSVSIKGSRTGWQTMSRNWGQNWQSNSVLNGQSLSFMVTAGDGRTVTSFNVAPS
GWQFGRTYEGSQF

Transcript Sequence

Transcript ID

VIT_06s0004g07970.t01
Transcript Infomation

cdna chromosome:12X:6:8696268:8697815:-1 gene:VIT_06s0004g07970 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6GUB7]
Sequence

CTCTTTAGTGTTTCTCCCCAATGGCCAACCGACCATCTCCATTTGGCCTCTTCTTCTTCT
TCGCTTTCTTCACTCTACAAATGCTCGCAGCCTCCGCCGACTACAGTGGCTGGGAGGGCG
GCCACGCCACCTTCTACGGCGGCGGTGACGCCTCCGGCACAATGGGAGGAGCGTGTGGGT
ATGGGAACTTGTACAGCCAGGGGTACGGAACCAACACAGCGGCGCTGAGCACCGCGCTGT
TCAACAATGGGCTGAGCTGCGGAGCTTGTTTCGAAATGCGATGCGACAACGACCCCAGGT
GGTGCCTCCCTGGCTCCATCACCGTCACTGCAACCAACTTTTGCCCCCCCAACTTCGCTT
TGGCCAACAACAATGGCGGGTGGTGCAACCCTCCTCTCCAACACTTCGACCTCGCGGAGC
CTGCCTTCCTCCAAATTGCACAGTACCGCGCTGGCATCGTCCCTGTTGCCTTCAGAAGGG
TACCATGTGCGAAGAAAGGAGGAATCAGATTCACCATCAATGGCCACAAATACTTCATCC
TAGTCCTGGTAACCAACGTCGCCGGCGCCGGCGACATCCACTCCGTCTCCATCAAGGGTT
CCCGAACAGGGTGGCAAACCATGTCAAGAAACTGGGGCCAAAACTGGCAGAGCAACTCCG
TTCTCAACGGCCAGAGCCTGTCCTTCATGGTCACCGCCGGCGACGGCAGAACCGTCACAA
GCTTCAACGTCGCCCCGTCCGGCTGGCAGTTTGGCCGGACCTACGAGGGTAGCCAATTTT
AGATGCTC