Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g07960.t01
CDS Infomation

cds chromosome:12X:6:8688360:8696267:-1 gene:VIT_06s0004g07960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGCTTCTTTTGGTGTTTAATACGACCCAAATTTCATGCATTCATTTCTCACATTTTC
CCCTCATTCCTTTCACACTACTTCAGTTTCGATCCAGATCGAGGAGACAGTAATTCGGTG
AAGATGGGTGAGAGCCAGCGGTTCCAGCTGGGAACCGTAGGAGCGTTGAGTTTGTCGGTG
GTTTCGTCGGTGTCGATTGTGATTTGCAATAAGGCGCTTATTAGCTCGCTTGGCTTCTCT
TTCGCCACAACTTTAACTAGCTGGCATCTTCTGGTCACATTTTGTTCTCTTCATGTGGCA
CTATGGATGAAATTATTTGAGCACAAGCCTTTTGACGCTAGAGCTGTGATGGGATTTGGC
ATACTAAATGGAACATCCATTGGGCTTTTGAATCTTAGCTTGGGTTTCAATTCTGTTGGT
TTCTACCAGATGACAAAACTGGCAATCATCCCCTGTACTGTTCTTCTGGAAACCCTTTTC
TTTAGGAAGAGATTCAGCCGGAGTATCCAGCTTTCTCTTTCTATCCTTCTTTTGGGTGTT
GGGATTGCAACGGTGACTGATTTGCAGCTCAATGCCCTGGGTTCTGTCTTATCTTTGCTT
GCAGTTATTACAACCTGTATCGCTCAGATTATGACCAATAACATCCAGAAGAAGTTCAAG
GTTTCTTCTACCCAACTCCTGTATCAGTCATGTCCTTATCAAGCCATGACATTGTTCATT
GCTGGCCCATTTCTGGATTGGCTTCTGACTAAGCAAAATGTTTTTGCTTTCAAATATACA
TCTGAAGTGCTGGTCTTCATTGTTCTATCTTGCCTGATATCTGTTTCTGTAAACTTCAGT
ACATTTCTAGTTATTGGGAAGACATCTCCTGTAACATACCAGGTCCTGGGACATCTAAAA
ACATGCCTAGTTTTGGCCTTTGGCTATGTTTTACTCCACGACCCGTTTAGCTGGCGCAAC
ATTCTGGGAATCCTGATTGCTTTAATTGGAATGGTGCTATATTCTTATTATTGCTCTCGT
GAGGGCCAGCAGAAGCCTAGTGAAGTATCAGCACAAATGGCCCAGGCAAAGGAAAGTGAA
ACCGATCCTCTAATAGGCGTGGAAAATGGAGCTGGGATCTTAACGGATGCTGTTGTTGCA
AAAGTCCCTGCTTGGAATTCAAACAAAGACCTGCAGGCATAA

Peptide Sequence

PEP ID

VIT_06s0004g07960.t01
PEP Infomation

pep chromosome:12X:6:8688360:8696267:-1 gene:VIT_06s0004g07960 transcript:VIT_06s0004g07960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MCFFWCLIRPKFHAFISHIFPSFLSHYFSFDPDRGDSNSVKMGESQRFQLGTVGALSLSV
VSSVSIVICNKALISSLGFSFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDARAVMGFG
ILNGTSIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFFRKRFSRSIQLSLSILLLGV
GIATVTDLQLNALGSVLSLLAVITTCIAQIMTNNIQKKFKVSSTQLLYQSCPYQAMTLFI
AGPFLDWLLTKQNVFAFKYTSEVLVFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLK
TCLVLAFGYVLLHDPFSWRNILGILIALIGMVLYSYYCSREGQQKPSEVSAQMAQAKESE
TDPLIGVENGAGILTDAVVAKVPAWNSNKDLQA

Transcript Sequence

Transcript ID

VIT_06s0004g07960.t01
Transcript Infomation

cdna chromosome:12X:6:8688360:8696267:-1 gene:VIT_06s0004g07960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACATTCTCATTTTACCCATCTGGAGGACTCTCTCTCTTCTAATGCTGAGGTTGCTAAAAA
CTATAGCACCCGCAGGCCATCATCTTATATATATATATATATACTATATGATCTTGAGAC
TATGATTTCTTCTTCCTTTCTATTCCTTTCTATTTGTACTGGAATTACCCTTTCCCATTG
AGTGAAGACTGAAGAGTAATGGTTGTGCAAGTAGTACATGTGCTTCTTTTGGTGTTTAAT
ACGACCCAAATTTCATGCATTCATTTCTCACATTTTCCCCTCATTCCTTTCACACTACTT
CAGTTTCGATCCAGATCGAGGAGACAGTAATTCGGTGAAGATGGGTGAGAGCCAGCGGTT
CCAGCTGGGAACCGTAGGAGCGTTGAGTTTGTCGGTGGTTTCGTCGGTGTCGATTGTGAT
TTGCAATAAGGCGCTTATTAGCTCGCTTGGCTTCTCTTTCGCCACAACTTTAACTAGCTG
GCATCTTCTGGTCACATTTTGTTCTCTTCATGTGGCACTATGGATGAAATTATTTGAGCA
CAAGCCTTTTGACGCTAGAGCTGTGATGGGATTTGGCATACTAAATGGAACATCCATTGG
GCTTTTGAATCTTAGCTTGGGTTTCAATTCTGTTGGTTTCTACCAGATGACAAAACTGGC
AATCATCCCCTGTACTGTTCTTCTGGAAACCCTTTTCTTTAGGAAGAGATTCAGCCGGAG
TATCCAGCTTTCTCTTTCTATCCTTCTTTTGGGTGTTGGGATTGCAACGGTGACTGATTT
GCAGCTCAATGCCCTGGGTTCTGTCTTATCTTTGCTTGCAGTTATTACAACCTGTATCGC
TCAGATTATGACCAATAACATCCAGAAGAAGTTCAAGGTTTCTTCTACCCAACTCCTGTA
TCAGTCATGTCCTTATCAAGCCATGACATTGTTCATTGCTGGCCCATTTCTGGATTGGCT
TCTGACTAAGCAAAATGTTTTTGCTTTCAAATATACATCTGAAGTGCTGGTCTTCATTGT
TCTATCTTGCCTGATATCTGTTTCTGTAAACTTCAGTACATTTCTAGTTATTGGGAAGAC
ATCTCCTGTAACATACCAGGTCCTGGGACATCTAAAAACATGCCTAGTTTTGGCCTTTGG
CTATGTTTTACTCCACGACCCGTTTAGCTGGCGCAACATTCTGGGAATCCTGATTGCTTT
AATTGGAATGGTGCTATATTCTTATTATTGCTCTCGTGAGGGCCAGCAGAAGCCTAGTGA
AGTATCAGCACAAATGGCCCAGGCAAAGGAAAGTGAAACCGATCCTCTAATAGGCGTGGA
AAATGGAGCTGGGATCTTAACGGATGCTGTTGTTGCAAAAGTCCCTGCTTGGAATTCAAA
CAAAGACCTGCAGGCATAATATGCTTCCTCGCTTTCCTACCTATTAATTCCTCCATCCTA
GATCAAGATTAGCAGACAAACTCTGTTTCAGCCAAGAGAAGAAGATGCTTTTGGCAGTGG
GTCATGGAACCAAGAATACGACTTTCTGTCATGGAAGTAGTCTCCAGAGCTAAGAGGAGA
TCACTTTTCTATTTTTTCCATTTGATTTTTTTTTTTAGCTTTGTATGAGTTTAGGGGGTT
GAATGGGATTCATGCCCCCATTTGATTTTTTTCAATTGGGGTTACTTTCCCATCCTAAAA
CACCCATAAGTCTCCATAACTGTTCCTTTTTGTATGCTCCCTTGAATATTCTTCTTCCTG
GTAAGATGTATTTTTTTTAACGGAAGAAAATATAATCCTTTCCCTTAATA