Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g07650.t01
CDS Infomation

cds chromosome:12X:6:8440843:8442499:-1 gene:VIT_06s0004g07650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAACCCACAAAAATACCATCCATATCCCCTTCTTGCTTGAGAAGATGGATGTTGTG
CTTGTTAAACCTGCAAAACCCACTCCTTCTGAGGTCCTTTCTTTCTCTACCATTGACAAT
GACCCCAATCTTGAGATCATTTGCCAAACCATTTATGCGTACAAAGCAAAGAGATTTTCC
TCTAGTGATGATAATGGTCATGATCTAGCTTCCTCGAACGGGAAAACCCATGATCTGGAT
TCTTGTGACCCAGCTAGTGTAATCAGTGACGCCCTCTCCAGAGTGTTAGTTTATTACTAT
CCTCTAGCTGGGAAGCTCAAGAGGCACAGTGATGGAGAACTTAGACTCAACTGCAATGCT
GCTGGGGTGCCTTTTCTAGTGGCAACAGCCAATTGCGAGCTTTCTTCCCTCTGTTATTTA
GATGGGATTACTGTCGAACTTGCTAAACCCTTTGTGTTTGATTGGCCAGGCGATGGTGGC
GATGGTAGACACCCTCTGGTGCTGCAGGTGACTAAGTTTTCTTGTGGGGGTTTCACAATT
GGAATGGGCATATCCCACTCAGTCTGTGATGGGTTCGGTGCTGCTCAATTCTTCCGTGCC
TTGGCTGAGCTTGCAAGCGGAAAGAGCGAGCCAACTGTGAAACCAGTGTGGGAGAGGGAG
AGGTTAGTGGGAACACCCAGAAAAAACCCCTTCCAAATCCCTATAGATGAGGCTTCTTTA
GCAACTTCACCACACTTGCCACCCACTGAAATTGTGCATGACTGCTTCAACGTGAATAGT
GAGAGTATCAAAAGACTCAAAACTAGCTTGATGAAACAATGTGGGGATGAAGCTCCCAAA
GAGGGTTTCACCACCATTGAAGCCCTCGGTGCCTATGTTTGGAGATCTAGGTTTAGAGCC
TTAGAATTGAACTCAGATGGAACAACCCTCTTCTCCATGACTGTGGGGTATAGACGCCTT
CTCAATCCCCCTCTGCCTGATGGGTATTACGGGAATGCTTTTGGTGCTGCAAATGCCACA
ACAATGGGGAAGGATCTCAATAAAGGACCTCTCTCAAGGGTTTCCAAACTGATCAAAGAA
AGCAAGAAGATTGCTTGTAGCTCTGACTACATTAGGAACTCAATAGACATGCTGGAGTTC
ATGAGACGACAAAATACAAAGTTCGAAACCAACGACGCAACCGTGGTTTTAACAGACTGG
CGAAGACTGGGTCTAGTTGAAGAAGTAGATTTCGGGTGGAAGGAGCCTGTGAACATGATA
CCGGTGCCATGGAACATGTTCAACTACGTGGGTTTATGTATTCTCACTTCTCCTTCCAGT
CTGGATCCTGCAATGAAAGGTGGGGTGAGGGTCCTTGTTTCCCTTCCTGCAGCTGCCATA
CCCAAGTTCAAGGAAGAGATGAATGCCCTCAGTCTTGGAGATGACAAGGCTTTAGCTTGA

Peptide Sequence

PEP ID

VIT_06s0004g07650.t01
PEP Infomation

pep chromosome:12X:6:8440843:8442499:-1 gene:VIT_06s0004g07650 transcript:VIT_06s0004g07650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATHKNTIHIPFLLEKMDVVLVKPAKPTPSEVLSFSTIDNDPNLEIICQTIYAYKAKRFS
SSDDNGHDLASSNGKTHDLDSCDPASVISDALSRVLVYYYPLAGKLKRHSDGELRLNCNA
AGVPFLVATANCELSSLCYLDGITVELAKPFVFDWPGDGGDGRHPLVLQVTKFSCGGFTI
GMGISHSVCDGFGAAQFFRALAELASGKSEPTVKPVWERERLVGTPRKNPFQIPIDEASL
ATSPHLPPTEIVHDCFNVNSESIKRLKTSLMKQCGDEAPKEGFTTIEALGAYVWRSRFRA
LELNSDGTTLFSMTVGYRRLLNPPLPDGYYGNAFGAANATTMGKDLNKGPLSRVSKLIKE
SKKIACSSDYIRNSIDMLEFMRRQNTKFETNDATVVLTDWRRLGLVEEVDFGWKEPVNMI
PVPWNMFNYVGLCILTSPSSLDPAMKGGVRVLVSLPAAAIPKFKEEMNALSLGDDKALA

Transcript Sequence

Transcript ID

VIT_06s0004g07650.t01
Transcript Infomation

cdna chromosome:12X:6:8440843:8442499:-1 gene:VIT_06s0004g07650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTGTATCACCTCAGCTAGCTCTCTAGCTTCCATGGCAACCCACAAAAATACCATCCATA
TCCCCTTCTTGCTTGAGAAGATGGATGTTGTGCTTGTTAAACCTGCAAAACCCACTCCTT
CTGAGGTCCTTTCTTTCTCTACCATTGACAATGACCCCAATCTTGAGATCATTTGCCAAA
CCATTTATGCGTACAAAGCAAAGAGATTTTCCTCTAGTGATGATAATGGTCATGATCTAG
CTTCCTCGAACGGGAAAACCCATGATCTGGATTCTTGTGACCCAGCTAGTGTAATCAGTG
ACGCCCTCTCCAGAGTGTTAGTTTATTACTATCCTCTAGCTGGGAAGCTCAAGAGGCACA
GTGATGGAGAACTTAGACTCAACTGCAATGCTGCTGGGGTGCCTTTTCTAGTGGCAACAG
CCAATTGCGAGCTTTCTTCCCTCTGTTATTTAGATGGGATTACTGTCGAACTTGCTAAAC
CCTTTGTGTTTGATTGGCCAGGCGATGGTGGCGATGGTAGACACCCTCTGGTGCTGCAGG
TGACTAAGTTTTCTTGTGGGGGTTTCACAATTGGAATGGGCATATCCCACTCAGTCTGTG
ATGGGTTCGGTGCTGCTCAATTCTTCCGTGCCTTGGCTGAGCTTGCAAGCGGAAAGAGCG
AGCCAACTGTGAAACCAGTGTGGGAGAGGGAGAGGTTAGTGGGAACACCCAGAAAAAACC
CCTTCCAAATCCCTATAGATGAGGCTTCTTTAGCAACTTCACCACACTTGCCACCCACTG
AAATTGTGCATGACTGCTTCAACGTGAATAGTGAGAGTATCAAAAGACTCAAAACTAGCT
TGATGAAACAATGTGGGGATGAAGCTCCCAAAGAGGGTTTCACCACCATTGAAGCCCTCG
GTGCCTATGTTTGGAGATCTAGGTTTAGAGCCTTAGAATTGAACTCAGATGGAACAACCC
TCTTCTCCATGACTGTGGGGTATAGACGCCTTCTCAATCCCCCTCTGCCTGATGGGTATT
ACGGGAATGCTTTTGGTGCTGCAAATGCCACAACAATGGGGAAGGATCTCAATAAAGGAC
CTCTCTCAAGGGTTTCCAAACTGATCAAAGAAAGCAAGAAGATTGCTTGTAGCTCTGACT
ACATTAGGAACTCAATAGACATGCTGGAGTTCATGAGACGACAAAATACAAAGTTCGAAA
CCAACGACGCAACCGTGGTTTTAACAGACTGGCGAAGACTGGGTCTAGTTGAAGAAGTAG
ATTTCGGGTGGAAGGAGCCTGTGAACATGATACCGGTGCCATGGAACATGTTCAACTACG
TGGGTTTATGTATTCTCACTTCTCCTTCCAGTCTGGATCCTGCAATGAAAGGTGGGGTGA
GGGTCCTTGTTTCCCTTCCTGCAGCTGCCATACCCAAGTTCAAGGAAGAGATGAATGCCC
TCAGTCTTGGAGATGACAAGGCTTTAGCTTGACACTCAAAACAAACATATATTTCTCGAT
CAAGTACTGAAAGAATTAATCCTTGGGCCTGTTCGTAACTATGCCACTGAATGTTGAGTG
TTGTGTTTTTTAATAATCTCTGCTGCCTTCTGTGTATTTATGAACTGTAAATAATTGGTT
GAGTGCAATATGTAAAACTCTTCCCTGCTTTCCCCCA