Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g07500.t01
CDS Infomation

cds chromosome:12X:6:8290089:8292826:-1 gene:VIT_06s0004g07500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCTTCCTCTGGGAGCTTAGAGACCTCTGCAAACTCGCATCCCCTTTTCTCTTTC
TCCTCTTTCATGTCCACTTCCTACTCCGACCTCCTCACGTCCGCCGACGAGGATCCCGTC
ACCACCACCACTGGTGACAAGGGTGCCGTGGGGAGGGGGCTTTCGGATCGAATTGCAGAG
AGGACGGGGTCCGGAGTGCCGAAGTTCAAGTCAATTCCTCCGCCTTCGCTGCCCATCTCC
CCGCCTCCGATCTCTCCTTCTTCTTACTTTTCTATTCCTGCAGGGTTGAGCCCAGCTGAA
CTTCTCGACTCGCCTGTGCTTCTCTCCACTTCTAACATTCTGCCTTCTCCGACAACAGGA
ACTTTTCCATCTCAGGGCTTCAATTGGAGGAGTAATTCGAACAGCAACCAGCAGGATGTC
AAAAGGGAAGATAAAAACTACCTAGATTTTTCGTTCCAACCCCAGGCAAGGCCTTCCACG
ACTTCAGCAAGCATGTTTCAGCCTTCAACCACCACGATTACTACTGAACAAGCCTTGAGA
GGACAGCAACCAGCTTGGAGTTTTCAAGAACCAACCAAGCAAGATAGTTTTTCATCAGAA
AAAACTACGGTGAAATCTGAATTTGGTTCCTACCAGAGCTTCTCCCCTGAGATTGCCACG
ATCCAAACTAACACTCAGAGCAACGGAAACGGCAACAATGGATTCCAATCGGATTATGGC
AGTTACCACGCATCATCTCAGTCAATTAGAGAGCAGAGAAGATCAGAGGACGGGTACAAT
TGGAGGAAATATGGGCAGAAACAAGTGAAAGGAAGCGAAAACCCGAGAAGCTATTACAAG
TGCACATACCCCAATTGCCCAACTAAGAAGAAAGTGGAAAGATCCTTGGAAGGCCAGGTC
ACTGAGATTGTCTACAAAGGTACTCATAACCATCCCAAGCCTCAGTCTACCAGGAGATCA
TCATTATCATCTTCTCAAACAATTCAAGCTTCCAATCCTCCCAACAATGAAGTTCCTGAT
CAGCCATTTGTGGCGCATGGCACTGGACAAATGGATTCCGTTGCAACACCAGAGAATTCA
TCAATCTCCATGGGGGATGATGACTTTGAGCAGAGCTCTCAGAAGAGTAAATCAGGAGGA
GATGACTTCGATGAAGATGAACCTGAGGCCAAAAGATGGAAAAAGGAGAGTGAAAATGAA
GGTATATCAGCCCCTGGGAGTAGAACAGTCAGAGAACCTAGAGTTGTTGTTCAAACAACC
AGTGACATCGATATCCTCGACGATGGCTATAGATGGAGGAAATATGGACAGAAAGTTGTC
AAGGGAAATCCAAATCCCAGGAGCTACTATAAGTGCACGAACCCAGGATGTCCCGTGAGA
AAGCATGTCGAGAGAGCCTCCCACGACCTCAGGGCAGTGATAACAACCTACGAGGGGAAG
CACAACCATGATGTGCCGGCAGCGCGAGGCAGCGGCAGCCACTCCGTCAACAGGCCATTG
CCATTGCCCGACACCACCGCCGCCGCCACCACCAACAACAATATGCCAATGGCAATCAGG
CCTTCAATCATGACCCATCTCCCCAACAACTCAACCACCAACCCTCTTCGCCATGTCAGG
CACCCCACATCAGAAGCCCAAGCAGCACCCTTCACGCTAGAGATGCTGCAGAGCCCTGAT
GGCTTCGGATTCTCCAGCTTCGGCAACTCCATGGCCACTTACATGAACCAGCCACAGCAC
CAGGACAATGTGTTCTCCAGAACCAAAGAAGAGCCCAGAGACGACATGTTATTCGAGTCT
CTGCTCTGTTGA

Peptide Sequence

PEP ID

VIT_06s0004g07500.t01
PEP Infomation

pep chromosome:12X:6:8290089:8292826:-1 gene:VIT_06s0004g07500 transcript:VIT_06s0004g07500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSSSGSLETSANSHPLFSFSSFMSTSYSDLLTSADEDPVTTTTGDKGAVGRGLSDRIAE
RTGSGVPKFKSIPPPSLPISPPPISPSSYFSIPAGLSPAELLDSPVLLSTSNILPSPTTG
TFPSQGFNWRSNSNSNQQDVKREDKNYLDFSFQPQARPSTTSASMFQPSTTTITTEQALR
GQQPAWSFQEPTKQDSFSSEKTTVKSEFGSYQSFSPEIATIQTNTQSNGNGNNGFQSDYG
SYHASSQSIREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLEGQV
TEIVYKGTHNHPKPQSTRRSSLSSSQTIQASNPPNNEVPDQPFVAHGTGQMDSVATPENS
SISMGDDDFEQSSQKSKSGGDDFDEDEPEAKRWKKESENEGISAPGSRTVREPRVVVQTT
SDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGK
HNHDVPAARGSGSHSVNRPLPLPDTTAAATTNNNMPMAIRPSIMTHLPNNSTTNPLRHVR
HPTSEAQAAPFTLEMLQSPDGFGFSSFGNSMATYMNQPQHQDNVFSRTKEEPRDDMLFES
LLC

Transcript Sequence

Transcript ID

VIT_06s0004g07500.t01
Transcript Infomation

cdna chromosome:12X:6:8290089:8292826:-1 gene:VIT_06s0004g07500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCTTCCTCTGGGAGCTTAGAGACCTCTGCAAACTCGCATCCCCTTTTCTCTTTC
TCCTCTTTCATGTCCACTTCCTACTCCGACCTCCTCACGTCCGCCGACGAGGATCCCGTC
ACCACCACCACTGGTGACAAGGGTGCCGTGGGGAGGGGGCTTTCGGATCGAATTGCAGAG
AGGACGGGGTCCGGAGTGCCGAAGTTCAAGTCAATTCCTCCGCCTTCGCTGCCCATCTCC
CCGCCTCCGATCTCTCCTTCTTCTTACTTTTCTATTCCTGCAGGGTTGAGCCCAGCTGAA
CTTCTCGACTCGCCTGTGCTTCTCTCCACTTCTAACATTCTGCCTTCTCCGACAACAGGA
ACTTTTCCATCTCAGGGCTTCAATTGGAGGAGTAATTCGAACAGCAACCAGCAGGATGTC
AAAAGGGAAGATAAAAACTACCTAGATTTTTCGTTCCAACCCCAGGCAAGGCCTTCCACG
ACTTCAGCAAGCATGTTTCAGCCTTCAACCACCACGATTACTACTGAACAAGCCTTGAGA
GGACAGCAACCAGCTTGGAGTTTTCAAGAACCAACCAAGCAAGATAGTTTTTCATCAGAA
AAAACTACGGTGAAATCTGAATTTGGTTCCTACCAGAGCTTCTCCCCTGAGATTGCCACG
ATCCAAACTAACACTCAGAGCAACGGAAACGGCAACAATGGATTCCAATCGGATTATGGC
AGTTACCACGCATCATCTCAGTCAATTAGAGAGCAGAGAAGATCAGAGGACGGGTACAAT
TGGAGGAAATATGGGCAGAAACAAGTGAAAGGAAGCGAAAACCCGAGAAGCTATTACAAG
TGCACATACCCCAATTGCCCAACTAAGAAGAAAGTGGAAAGATCCTTGGAAGGCCAGGTC
ACTGAGATTGTCTACAAAGGTACTCATAACCATCCCAAGCCTCAGTCTACCAGGAGATCA
TCATTATCATCTTCTCAAACAATTCAAGCTTCCAATCCTCCCAACAATGAAGTTCCTGAT
CAGCCATTTGTGGCGCATGGCACTGGACAAATGGATTCCGTTGCAACACCAGAGAATTCA
TCAATCTCCATGGGGGATGATGACTTTGAGCAGAGCTCTCAGAAGAGTAAATCAGGAGGA
GATGACTTCGATGAAGATGAACCTGAGGCCAAAAGATGGAAAAAGGAGAGTGAAAATGAA
GGTATATCAGCCCCTGGGAGTAGAACAGTCAGAGAACCTAGAGTTGTTGTTCAAACAACC
AGTGACATCGATATCCTCGACGATGGCTATAGATGGAGGAAATATGGACAGAAAGTTGTC
AAGGGAAATCCAAATCCCAGGAGCTACTATAAGTGCACGAACCCAGGATGTCCCGTGAGA
AAGCATGTCGAGAGAGCCTCCCACGACCTCAGGGCAGTGATAACAACCTACGAGGGGAAG
CACAACCATGATGTGCCGGCAGCGCGAGGCAGCGGCAGCCACTCCGTCAACAGGCCATTG
CCATTGCCCGACACCACCGCCGCCGCCACCACCAACAACAATATGCCAATGGCAATCAGG
CCTTCAATCATGACCCATCTCCCCAACAACTCAACCACCAACCCTCTTCGCCATGTCAGG
CACCCCACATCAGAAGCCCAAGCAGCACCCTTCACGCTAGAGATGCTGCAGAGCCCTGAT
GGCTTCGGATTCTCCAGCTTCGGCAACTCCATGGCCACTTACATGAACCAGCCACAGCAC
CAGGACAATGTGTTCTCCAGAACCAAAGAAGAGCCCAGAGACGACATGTTATTCGAGTCT
CTGCTCTGTTGAAGCTCTGCCCAGCTTCAGGCAAGGTTTGAAGATCAGAAGAAGGAAAAA
AAAGAACAAAATCAATAAGGAAGCTTTATTTCATTTAATTATCCCCCATTTTGTTTGTTT
TTTTGATGTATATTTCTACAGGTATGTGGTTATGTATATTCAAAATTTGGCACTAAATTT
ATTTTTTGAATTTGTCACACA