Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g07180.t01
CDS Infomation

cds chromosome:12X:6:7953286:7955777:1 gene:VIT_06s0004g07180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTCAGCCCCAAAATCGCTCTCTCCAAAGCGAGTTATAAAGCTCCTCAAATCGGAG
AAAAACCCTCACTCAGCTCTCTCTATATTCGATTCAGTGACTCGCTTCCCGGGTTATTCC
CACACGCCTTACGTCTTCCACCACATCCTCAAGCGGCTCTTCGACCCCAAACTGGTCGCT
CACGTAAGTCGAATTGTGGAACTCATTCGCACCCAGAAGTGTAAGTGTCCGGAAGATGTT
GCATTAACGGTGATTAAGGCCTACGCGAAGAACTCAATGCCTGACCAGGCGTTGGATATT
TTTCAACGAATGCACGAGATTTTCGGGTGTCAACCAGGAATAAGATCTTACAATTCACTT
CTCAATGCCTTAATTGAGTCGAATAAGTGGGACGAAGCCGAGTCATTTTTTCTCTACTTT
GAAACGATGGGTTTGTCTCCAAATTTGCAAACCTATAATATTTTAATCAAGATTTCTTGT
AGGAAGAAGCAATTTGATAAGGCCAAGGAGCTGTTGAATTGGATGTGGGAGCAGGGTTTT
AGTCCTGATGTTTTTAGCTATGGTACTTTGATCAATTCTCTTGCCAAGAATGGTTATATG
TCAGATGCGTTGAAGTTGTTCGATGAAATGCCTGAAAGAGGGGTGACCCCTGATGTGGCG
TGTTATAACATTTTGATTGATGGGTTTTTTAAGAAAGGTGATATTTTGAATGCTAGCGAG
ATTTGGGAGAGGTTGTTGAAGGGGCCTTCTGTTTACCCGAATATTCCTTCTTATAATGTT
ATGATTAATGGTCTTTGTAAGTGTGGGAAGTTTGATGAAAGTTTCGAGATTTGGCATAGG
ATGAAGAAAAATGAGCGAGGACAGGATTTATATACGTACAGTACTTTGATACATGGATTA
TGTGGGTCAGGGAACCTAGATGGGGCTACAAGAGTGTATAAAGAAATGGCTGAGAATGGG
GTGTCTCCTGATGTGGTTGTATATAATACAATGCTTAATGGGTATTTGCGAGCAGGGAGG
ATTGAGGAATGTTTGGAGTTGTGGAAGGTAATGGAGAAGGAGGGTTGCCGTACTGTTGTT
AGTTACAACATACTAATCAGAGGGTTGTTTGAGAATGCGAAGGTGGATGAAGCAATTTCA
ATTTGGGAGCTTTTGCCAGAGAAAGATTGCTGTGCAGATTCCATGACTTATGGGGTCTTG
GTTCATGGATTGTGTAAGAATGGCTACTTGAATAAGGCTTTATCAATCTTAGAAGAGGCA
GAAAATGGTAGAGGTGATTTGGATACATTTGCATATTCATCGATGATTAATGGATTATGC
AGAGAAGGAAGATTAGATGAAGTGGCTGGTGTCCTTGATCAGATGACTAAACATGGCTGT
AAACCAAATCCTCATGTTTGTAATGCAGTCATTAATGGCTTTGTCCGAGCTTCAAAACTT
GAGGATGCACTTCGGTTTTTTGGGAATATGGTCAGCAAGGGTTGCTTTCCTACTGTTGTC
ACCTATAACACACTCATAAATGGCTTATCCAAAGCAGAAAGATTTAGTGAGGCCTATGCC
CTTGTGAAGGAAATGCTGCACAAAGGATGGAAGCCAAACATGATCACATATAGCTTGTTG
ATGAATGGCCTTTGTCAAGGCAAGAAGCTTGACATGGCCCTCAACTTGTGGTGCCAAGCC
CTTGAAAAGGGGTTCAAGCCGGATGTGAAGATGCACAACATTATAATTCATGGACTTTGC
TCTTCAGGAAAAGTTGAAGATGCTTTGCAGCTATATTCAGAAATGAAGCAACGGAAATGT
GTTCCAAATCTTGTAACCCACAATACTCTCATGGAGGGGTTCTATAAAGTAAGAGATTTT
GAAAGGGCATCAAAGATTTGGGATCACATTTTACAATCGTGGAGTTCTTCCAACTGCTAT
TACATGGAACATACTTGTCAGGGCTGTACTTGA

Peptide Sequence

PEP ID

VIT_06s0004g07180.t01
PEP Infomation

pep chromosome:12X:6:7953286:7955777:1 gene:VIT_06s0004g07180 transcript:VIT_06s0004g07180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA
HVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSL
LNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGF
SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE
IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL
CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV
SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA
ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL
EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL
MNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKC
VPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCYYMEHTCQGCT

Transcript Sequence

Transcript ID

VIT_06s0004g07180.t01
Transcript Infomation

cdna chromosome:12X:6:7953286:7955777:1 gene:VIT_06s0004g07180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAATCGGGTCTTTATCTCTGATCTAAATCCAGCCGCCGGAACCCTACAAAACATGCCATA
ACTATTGGAGAAGGAGAGAGGGATTTAAATTGCTATTTTCTACCTCATGGCCTCAGCCCC
AAAATCGCTCTCTCCAAAGCGAGTTATAAAGCTCCTCAAATCGGAGAAAAACCCTCACTC
AGCTCTCTCTATATTCGATTCAGTGACTCGCTTCCCGGGTTATTCCCACACGCCTTACGT
CTTCCACCACATCCTCAAGCGGCTCTTCGACCCCAAACTGGTCGCTCACGTAAGTCGAAT
TGTGGAACTCATTCGCACCCAGAAGTGTAAGTGTCCGGAAGATGTTGCATTAACGGTGAT
TAAGGCCTACGCGAAGAACTCAATGCCTGACCAGGCGTTGGATATTTTTCAACGAATGCA
CGAGATTTTCGGGTGTCAACCAGGAATAAGATCTTACAATTCACTTCTCAATGCCTTAAT
TGAGTCGAATAAGTGGGACGAAGCCGAGTCATTTTTTCTCTACTTTGAAACGATGGGTTT
GTCTCCAAATTTGCAAACCTATAATATTTTAATCAAGATTTCTTGTAGGAAGAAGCAATT
TGATAAGGCCAAGGAGCTGTTGAATTGGATGTGGGAGCAGGGTTTTAGTCCTGATGTTTT
TAGCTATGGTACTTTGATCAATTCTCTTGCCAAGAATGGTTATATGTCAGATGCGTTGAA
GTTGTTCGATGAAATGCCTGAAAGAGGGGTGACCCCTGATGTGGCGTGTTATAACATTTT
GATTGATGGGTTTTTTAAGAAAGGTGATATTTTGAATGCTAGCGAGATTTGGGAGAGGTT
GTTGAAGGGGCCTTCTGTTTACCCGAATATTCCTTCTTATAATGTTATGATTAATGGTCT
TTGTAAGTGTGGGAAGTTTGATGAAAGTTTCGAGATTTGGCATAGGATGAAGAAAAATGA
GCGAGGACAGGATTTATATACGTACAGTACTTTGATACATGGATTATGTGGGTCAGGGAA
CCTAGATGGGGCTACAAGAGTGTATAAAGAAATGGCTGAGAATGGGGTGTCTCCTGATGT
GGTTGTATATAATACAATGCTTAATGGGTATTTGCGAGCAGGGAGGATTGAGGAATGTTT
GGAGTTGTGGAAGGTAATGGAGAAGGAGGGTTGCCGTACTGTTGTTAGTTACAACATACT
AATCAGAGGGTTGTTTGAGAATGCGAAGGTGGATGAAGCAATTTCAATTTGGGAGCTTTT
GCCAGAGAAAGATTGCTGTGCAGATTCCATGACTTATGGGGTCTTGGTTCATGGATTGTG
TAAGAATGGCTACTTGAATAAGGCTTTATCAATCTTAGAAGAGGCAGAAAATGGTAGAGG
TGATTTGGATACATTTGCATATTCATCGATGATTAATGGATTATGCAGAGAAGGAAGATT
AGATGAAGTGGCTGGTGTCCTTGATCAGATGACTAAACATGGCTGTAAACCAAATCCTCA
TGTTTGTAATGCAGTCATTAATGGCTTTGTCCGAGCTTCAAAACTTGAGGATGCACTTCG
GTTTTTTGGGAATATGGTCAGCAAGGGTTGCTTTCCTACTGTTGTCACCTATAACACACT
CATAAATGGCTTATCCAAAGCAGAAAGATTTAGTGAGGCCTATGCCCTTGTGAAGGAAAT
GCTGCACAAAGGATGGAAGCCAAACATGATCACATATAGCTTGTTGATGAATGGCCTTTG
TCAAGGCAAGAAGCTTGACATGGCCCTCAACTTGTGGTGCCAAGCCCTTGAAAAGGGGTT
CAAGCCGGATGTGAAGATGCACAACATTATAATTCATGGACTTTGCTCTTCAGGAAAAGT
TGAAGATGCTTTGCAGCTATATTCAGAAATGAAGCAACGGAAATGTGTTCCAAATCTTGT
AACCCACAATACTCTCATGGAGGGGTTCTATAAAGTAAGAGATTTTGAAAGGGCATCAAA
GATTTGGGATCACATTTTACAATCGTGGAGTTCTTCCAACTGCTATTACATGGAACATAC
TTGTCAGGGCTGTACTTGATAATGGGGCTTTGACATGATTATTTGGGCATGAAATATCTT
GGGAATTCTGTTTGGGGTTAGATTTGATGTGACAAGACCTTGCCCTAAAGGGATATATGG
AACCAGTCTTTGTACCTGCATCCATGAAAGGAAATCCGGGTATGCAAATGAGATATTTTG
GGTTTGTAAGTTTATGTTCCTCTTTTCACAAGTTTTCACG