Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g07070.t01
CDS Infomation

cds chromosome:12X:6:7819271:7823818:-1 gene:VIT_06s0004g07070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCAGCTCTCGAGTGTTGGTCCAGCCGAGCTAGCACAGACGAGGACATGGTGGAA
CAAGTCCTGATGAGAACTCAGGACAGATCGGAGGGTCTGCCGGAGAATTCGTCCGGTGCA
GGAGTCAAGGAGTCGTCGGCGATGCAGAAGAGGTTGCAGAGGCTGAGTAGAAATGTGTCC
GAGGCTATTGCATCGCTGAAGAACTCACTGAATCTGGACTCGCCCCGTGATCCACCTGCT
TCTAAGATCGAGAGCTGTCGCAAGCTTGTGTGGGGCGGTGTTGTTCGGAACCTCACGCAA
CTGTACCCTGGTAGTCAGCTACCGGAGAAGCTCGTCTCCAATATTCGCAAGCATTATGAT
TCCTTGCCTCTCAGTTATGCCCAGGCTGGATTCGATATGAAAGATGTCTTTCTTCATATT
AGAATGATCGAGCAAGCATCCGTGGATGACCATCCTGCGATTTTGATTCAAGAAGTGTCT
GATGATGAGATTCAAGGTTCTGTTTTCAAGCTCACTTTTGCCTGTAACTCTTCGATTTCA
TGGCCAGCCATGTCCGGTGCACTTGATAGTGCTTCCATTTGTTGCAAGAAGATACAGATC
TTTGAGAAGAAAGGATTTACTTTAGGAATTATTCTTCTTCTGGTTCAAGCTGGGCAAGAG
AAATCGTTCCAGAACAGGATTGAGAATGCCCTGAAGTTTGCTATAAAGAAGTCCAAACCC
ACCACCGTGAAGCTTCCATTTGGCTTATGTGGCTGTCAAGAGGAAAATACTAAGGGGAGA
GAGGTGGGGGAGATTGAAGAGGAAGGCGGTGAACCACACCATAGAAATGGCATTGATAAT
TCGAACACTAAGGTTCAGCTCCAGATGCCACTGCCAACATCATCTTTTGTTGTTTCAGTT
GATGAATGGCAGACGGTCCAATCAGGTGGAGAGGAAATTGGGAAATGGTTGTTGAACTCA
GATAATCTTGAATTTGTTGATCAGATTGGGCCAAATTCATTTAAAGGGGTTTACAAGGGA
AAAAGGGTTGGAATCGAGAAGCTCAAGGGTTGTGACAAGGGAAATTCATATGAGTTTGAG
CTCCGAAAGGATCTGTTAGAGCTGATGACATGTGGGCATAAGAACATTCTGCAATTTTTT
GGTGTTTGTGTTGATGAAAATCATGGTTTATGTGTTGTGACTAAACTAATGGAAGGTGGA
TCAGTTCATGATGTTATCCTAAAGAACAAGAAGTTTCAGAACAAGGAAATAATAAGGATT
GCTATTGATGTAGCAGAGGGGATCAAGTTCATGAATGATCATGGTGTTGCATATAGAGAT
CTCAACACACAAAGGGTCTTATTGGATAGACATGGGAATGCTTGCCTGGGGGACATGGGT
ATAGTCACTGCTTGCAAGAGTGTTGGTGAGGCAATGGAGTATGAAACTGATGGCTATCGG
TGGCTAGCTCCTGAGATCATTGCAGGTGATCCAGAGAGTGTTACAGAGACATTGATGAGT
AATGTGTATAGCTTTGGGATGGTACTTTGGGAGATGGTGACTGGTGAGGCAGCCTACTCG
GCATATTCACCTGTGCAGGCAGCTGTTGGAATAGCTGCTTGTGGGCTTAGACCTGAAATT
CCAAAGGATTGCCCACAAATCCTGAGATCTCTGATGACAAAATGCTGGAACAATTGCCCT
TCCAAGCGCCCTCAGTTCTCAGAGATTCTATCGATATTGCTGCGGCCCAACAACAGCAAC
AATAACAACAACAACAATAGCAACAATAGTATTAGGTGA

Peptide Sequence

PEP ID

VIT_06s0004g07070.t01
PEP Infomation

pep chromosome:12X:6:7819271:7823818:-1 gene:VIT_06s0004g07070 transcript:VIT_06s0004g07070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAALECWSSRASTDEDMVEQVLMRTQDRSEGLPENSSGAGVKESSAMQKRLQRLSRNVS
EAIASLKNSLNLDSPRDPPASKIESCRKLVWGGVVRNLTQLYPGSQLPEKLVSNIRKHYD
SLPLSYAQAGFDMKDVFLHIRMIEQASVDDHPAILIQEVSDDEIQGSVFKLTFACNSSIS
WPAMSGALDSASICCKKIQIFEKKGFTLGIILLLVQAGQEKSFQNRIENALKFAIKKSKP
TTVKLPFGLCGCQEENTKGREVGEIEEEGGEPHHRNGIDNSNTKVQLQMPLPTSSFVVSV
DEWQTVQSGGEEIGKWLLNSDNLEFVDQIGPNSFKGVYKGKRVGIEKLKGCDKGNSYEFE
LRKDLLELMTCGHKNILQFFGVCVDENHGLCVVTKLMEGGSVHDVILKNKKFQNKEIIRI
AIDVAEGIKFMNDHGVAYRDLNTQRVLLDRHGNACLGDMGIVTACKSVGEAMEYETDGYR
WLAPEIIAGDPESVTETLMSNVYSFGMVLWEMVTGEAAYSAYSPVQAAVGIAACGLRPEI
PKDCPQILRSLMTKCWNNCPSKRPQFSEILSILLRPNNSNNNNNNNSNNSIR

Transcript Sequence

Transcript ID

VIT_06s0004g07070.t01
Transcript Infomation

cdna chromosome:12X:6:7819271:7823818:-1 gene:VIT_06s0004g07070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGGAAAATGTGGGAAACCTCAGGAATCTGATTGAAACGTATCTCCACAGCCTAAAGCT
AAGGTTTACTCTGGGTGTGGTTCGAGCCACATTTTGCTTGGGTTCGACCATGGCTGCAGC
TCTCGAGTGTTGGTCCAGCCGAGCTAGCACAGACGAGGACATGGTGGAACAAGTCCTGAT
GAGAACTCAGGACAGATCGGAGGGTCTGCCGGAGAATTCGTCCGGTGCAGGAGTCAAGGA
GTCGTCGGCGATGCAGAAGAGGTTGCAGAGGCTGAGTAGAAATGTGTCCGAGGCTATTGC
ATCGCTGAAGAACTCACTGAATCTGGACTCGCCCCGTGATCCACCTGCTTCTAAGATCGA
GAGCTGTCGCAAGCTTGTGTGGGGCGGTGTTGTTCGGAACCTCACGCAACTGTACCCTGG
TAGTCAGCTACCGGAGAAGCTCGTCTCCAATATTCGCAAGCATTATGATTCCTTGCCTCT
CAGTTATGCCCAGGCTGGATTCGATATGAAAGATGTCTTTCTTCATATTAGAATGATCGA
GCAAGCATCCGTGGATGACCATCCTGCGATTTTGATTCAAGAAGTGTCTGATGATGAGAT
TCAAGGTTCTGTTTTCAAGCTCACTTTTGCCTGTAACTCTTCGATTTCATGGCCAGCCAT
GTCCGGTGCACTTGATAGTGCTTCCATTTGTTGCAAGAAGATACAGATCTTTGAGAAGAA
AGGATTTACTTTAGGAATTATTCTTCTTCTGGTTCAAGCTGGGCAAGAGAAATCGTTCCA
GAACAGGATTGAGAATGCCCTGAAGTTTGCTATAAAGAAGTCCAAACCCACCACCGTGAA
GCTTCCATTTGGCTTATGTGGCTGTCAAGAGGAAAATACTAAGGGGAGAGAGGTGGGGGA
GATTGAAGAGGAAGGCGGTGAACCACACCATAGAAATGGCATTGATAATTCGAACACTAA
GGTTCAGCTCCAGATGCCACTGCCAACATCATCTTTTGTTGTTTCAGTTGATGAATGGCA
GACGGTCCAATCAGGTGGAGAGGAAATTGGGAAATGGTTGTTGAACTCAGATAATCTTGA
ATTTGTTGATCAGATTGGGCCAAATTCATTTAAAGGGGTTTACAAGGGAAAAAGGGTTGG
AATCGAGAAGCTCAAGGGTTGTGACAAGGGAAATTCATATGAGTTTGAGCTCCGAAAGGA
TCTGTTAGAGCTGATGACATGTGGGCATAAGAACATTCTGCAATTTTTTGGTGTTTGTGT
TGATGAAAATCATGGTTTATGTGTTGTGACTAAACTAATGGAAGGTGGATCAGTTCATGA
TGTTATCCTAAAGAACAAGAAGTTTCAGAACAAGGAAATAATAAGGATTGCTATTGATGT
AGCAGAGGGGATCAAGTTCATGAATGATCATGGTGTTGCATATAGAGATCTCAACACACA
AAGGGTCTTATTGGATAGACATGGGAATGCTTGCCTGGGGGACATGGGTATAGTCACTGC
TTGCAAGAGTGTTGGTGAGGCAATGGAGTATGAAACTGATGGCTATCGGTGGCTAGCTCC
TGAGATCATTGCAGGTGATCCAGAGAGTGTTACAGAGACATTGATGAGTAATGTGTATAG
CTTTGGGATGGTACTTTGGGAGATGGTGACTGGTGAGGCAGCCTACTCGGCATATTCACC
TGTGCAGGCAGCTGTTGGAATAGCTGCTTGTGGGCTTAGACCTGAAATTCCAAAGGATTG
CCCACAAATCCTGAGATCTCTGATGACAAAATGCTGGAACAATTGCCCTTCCAAGCGCCC
TCAGTTCTCAGAGATTCTATCGATATTGCTGCGGCCCAACAACAGCAACAATAACAACAA
CAACAATAGCAACAATAGTATTAGGTGAGAAGCCTTTGGATTACCAAGGAACCTAATCTA
CTGATACTAAAAGTTTGTGTAAAAAATGAGCCCCTTGTTAAATGGGTGCTGCCATGCCTA
AATGTAGATCCAGTAAGTTTATTTTTCTCAAAGGAAATGAAGATATAAATCTTCTTTT