Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g07010.t01
CDS Infomation

cds chromosome:12X:6:7756453:7760222:1 gene:VIT_06s0004g07010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTCTGCGCATGGATTTGCTTCTTCTCTGATGAGTCCGACCGAATTGGGCTTTACA
CTTTCTTCATCCTTCTCAATTCAACGGCCCCGGTTAATCGTTCCCAAGTTTTCTCGGAGT
TTTTTAGGGGAATATTGTTCAAGGGCAACTACAATCTGCAACCACCAAAACCCTAGGTTT
GTAGTCCCGAAACGAGATAAAATTCGAGAATTTAGGTTGTTCAAATCGGTTGAATTGGAT
CAGTTTCTGACGAGTGACGATGAAGATGAAATGAGCGAGGGCTTTTTCGAAGCCATAGAG
GAATTAGAGCGAATGACGAGGGAGCCCTCGGATGTTCTCGAGGAAATGAATGATCGGCTT
TCTGCTCGTGAATTACAGCTGGTGCTGGTGTATTTTTCGCAAGAAGGAAGGGACTCGTGG
TGTGCACTGGAGGTGTTTGAGTGGCTTAGGAAGGAGAACCGAGTTGATAAGGAGACTATG
GAGCTTATGGTTTCGATAATGTGCAGTTGGGTTAAGAAGCTGATTGAAGGGGAACATGAT
GTTGGGGATGTGGTCGACCTTCTTGTGGACATGGATTGTGTTGGACTCAAGCCTGGTTTT
AGTATGATTGAGAAAGTGATATCTCTGTATTGGGAGATGGAGGAGAAGGAGAAGGCAGTT
TTGTTTGTGAAAGAGGTTTTGAGACGGGAAATTGCTTATTCTGAGGATGATGGGGATGGC
CATAAAGGAGGCCCAACTGGGTATCTTGCTTGGAAGATGATGGCAGAGGGGAACTACAGG
GGTGCAGTCAAATTGGTGATTCATCTTAGAGAATCTGGGTTGAAGCCAGAGGTCTATAGC
TACCTCATTGCAATGACAGCTGTAGTTAAAGAGCTGAATGAATTTGCAAAAGCTTTACGC
AAGTTAAAAGGTTTCACAAAGTCTGGTTTGATAGCTGAACTTGATGCAGAAAATGTTGAA
CTTATTGAGAAGTACCAATCTGACCTTCTAGCTGATGGGGTGCGCTTGTCCAGTTGGGTG
ATTCAAGAGGGAAGGTCTCCCCTTCATGGGGTGGTTTATGAGAGACTCCTTGCTATGTAC
ATTTGTGCTGGTCGTGGACTTGAGGCAGAAAGACAATTGTGGGAAATGAAGCTTGTGGGT
AAAGAAGCCGATAGGGAGCTTTATGACATTGTCCTGGCCATCTGTGCTTCCAAAAAAGAG
GCCAGTGCTATTTCACGATTGCTTACTGGAATGGAGGTCACAAGTTCTATACGTAGGAAG
AAAACCTTATCATGGTTGTTGAGAGGTTACATTAAAGGAAGCCATTTTGATGATGCTTCA
GAAACAATTATTAAAATGCTTGACTTGGGCCTGTGTCCAGAGTATCTAGACAGGGCAGCT
GTGCTGCAGGGACTGAGAAATAGGATCCAACAAACAGGAAATGTAGAAACTTATCTCAAG
CTTTGCAAGCACCTTTCCGATGCCAATTTGATTGGACCTTGTCTTGTATATCTGTATATA
AAGAAGTATAAGCTTTGGATCTTAAAAACGATTTGA

Peptide Sequence

PEP ID

VIT_06s0004g07010.t01
PEP Infomation

pep chromosome:12X:6:7756453:7760222:1 gene:VIT_06s0004g07010 transcript:VIT_06s0004g07010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASAHGFASSLMSPTELGFTLSSSFSIQRPRLIVPKFSRSFLGEYCSRATTICNHQNPRF
VVPKRDKIREFRLFKSVELDQFLTSDDEDEMSEGFFEAIEELERMTREPSDVLEEMNDRL
SARELQLVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLIEGEHD
VGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEEKEKAVLFVKEVLRREIAYSEDDGDG
HKGGPTGYLAWKMMAEGNYRGAVKLVIHLRESGLKPEVYSYLIAMTAVVKELNEFAKALR
KLKGFTKSGLIAELDAENVELIEKYQSDLLADGVRLSSWVIQEGRSPLHGVVYERLLAMY
ICAGRGLEAERQLWEMKLVGKEADRELYDIVLAICASKKEASAISRLLTGMEVTSSIRRK
KTLSWLLRGYIKGSHFDDASETIIKMLDLGLCPEYLDRAAVLQGLRNRIQQTGNVETYLK
LCKHLSDANLIGPCLVYLYIKKYKLWILKTI

Transcript Sequence

Transcript ID

VIT_06s0004g07010.t01
Transcript Infomation

cdna chromosome:12X:6:7756453:7760222:1 gene:VIT_06s0004g07010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATGGATGTGCCAGACAGCATTCCCTTTTCTCTTGGACTTCATTTTTCATGACAATT
GTGTTTGGTTGCCGGGAAAAATGAAACAGAAGCTTAAATTTTGAATTTCTATTTGGAAAT
CCAGAAGAAAAAGGAAAAAAAAGCTTTTACTCAACTGAGTCTGGTATGAATGGGCGGTTC
ATCTTTTGAAAATCAAAATTTTCTTTTCTTTTCTTTGTTTCTTGGCAACCAAACGCAGTG
TGATTCTGGTAGCTTTGTTCATGTGACCCGAAAGTCTTGAATTGAAGTGAAGTGAAGTGA
AGTGAAGACATGGCCTCTGCGCATGGATTTGCTTCTTCTCTGATGAGTCCGACCGAATTG
GGCTTTACACTTTCTTCATCCTTCTCAATTCAACGGCCCCGGTTAATCGTTCCCAAGTTT
TCTCGGAGTTTTTTAGGGGAATATTGTTCAAGGGCAACTACAATCTGCAACCACCAAAAC
CCTAGGTTTGTAGTCCCGAAACGAGATAAAATTCGAGAATTTAGGTTGTTCAAATCGGTT
GAATTGGATCAGTTTCTGACGAGTGACGATGAAGATGAAATGAGCGAGGGCTTTTTCGAA
GCCATAGAGGAATTAGAGCGAATGACGAGGGAGCCCTCGGATGTTCTCGAGGAAATGAAT
GATCGGCTTTCTGCTCGTGAATTACAGCTGGTGCTGGTGTATTTTTCGCAAGAAGGAAGG
GACTCGTGGTGTGCACTGGAGGTGTTTGAGTGGCTTAGGAAGGAGAACCGAGTTGATAAG
GAGACTATGGAGCTTATGGTTTCGATAATGTGCAGTTGGGTTAAGAAGCTGATTGAAGGG
GAACATGATGTTGGGGATGTGGTCGACCTTCTTGTGGACATGGATTGTGTTGGACTCAAG
CCTGGTTTTAGTATGATTGAGAAAGTGATATCTCTGTATTGGGAGATGGAGGAGAAGGAG
AAGGCAGTTTTGTTTGTGAAAGAGGTTTTGAGACGGGAAATTGCTTATTCTGAGGATGAT
GGGGATGGCCATAAAGGAGGCCCAACTGGGTATCTTGCTTGGAAGATGATGGCAGAGGGG
AACTACAGGGGTGCAGTCAAATTGGTGATTCATCTTAGAGAATCTGGGTTGAAGCCAGAG
GTCTATAGCTACCTCATTGCAATGACAGCTGTAGTTAAAGAGCTGAATGAATTTGCAAAA
GCTTTACGCAAGTTAAAAGGTTTCACAAAGTCTGGTTTGATAGCTGAACTTGATGCAGAA
AATGTTGAACTTATTGAGAAGTACCAATCTGACCTTCTAGCTGATGGGGTGCGCTTGTCC
AGTTGGGTGATTCAAGAGGGAAGGTCTCCCCTTCATGGGGTGGTTTATGAGAGACTCCTT
GCTATGTACATTTGTGCTGGTCGTGGACTTGAGGCAGAAAGACAATTGTGGGAAATGAAG
CTTGTGGGTAAAGAAGCCGATAGGGAGCTTTATGACATTGTCCTGGCCATCTGTGCTTCC
AAAAAAGAGGCCAGTGCTATTTCACGATTGCTTACTGGAATGGAGGTCACAAGTTCTATA
CGTAGGAAGAAAACCTTATCATGGTTGTTGAGAGGTTACATTAAAGGAAGCCATTTTGAT
GATGCTTCAGAAACAATTATTAAAATGCTTGACTTGGGCCTGTGTCCAGAGTATCTAGAC
AGGGCAGCTGTGCTGCAGGGACTGAGAAATAGGATCCAACAAACAGGAAATGTAGAAACT
TATCTCAAGCTTTGCAAGCACCTTTCCGATGCCAATTTGATTGGACCTTGTCTTGTATAT
CTGTATATAAAGAAGTATAAGCTTTGGATCTTAAAAACGATTTGAATAATTCAGAAGAAA
AGCTACGAGATTCTGTGTTCCAAAATCTGTTTTGGAAGCATGCACTCATGGTTCAGATTT
TGTACCACAAAAGTTTATTGTACTGGAACCTTTTTTACGTGCGAATCCTGTATAGTTTTG
GATGCTATAAGAGAGTAAATGATGCTGATGAACCAGTCTAGGAGATTGAGTGCCTGTGGG
AATTAGAAATACATTTTGGTTAATCTTCCTCTCAGACTCGAATATGTGTAAATAAGGTGA
TCCTGTAAACACAGTCAAGATTCGAGAACCTTCGACATGATGTAACTTGAAAGACTGCAT
ATACGTACTACAGGTGTGTTCTTATGGCATTCTTGTTCCTTTCTTGCTTGAGTGTCATAC
TTATACAAAGAACAAAATTAGAAGATAATTTAT