Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06960.t01
CDS Infomation

cds chromosome:12X:6:7674754:7678369:1 gene:VIT_06s0004g06960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTGTCCAAAAGAGGAATGCTGGGGATGCTGCTTCTAGTCCTATGATCAAGATCAAG
GTCTCCCATGGTTCTTATCATCACTATATCACCATCCCTGCTCAGTCTACTTTTGGGGAT
CTGAAAAGGGTTCTTGCCCATGAGACTGGTCTGGAGCCTAAGGAGCAGAGACTTTTGTTT
AGAGGGAAAGAAAAGGAAAATGATGAATGCTTGCACATGGTGGGTGTAAAAGAAATGTCC
AAGGTGATACTATTAGAGGACCCAGCTAGCAAAGAGAAGAAGCTTGAGGAAATGAAGAAA
GATCAGGGCATATTAAAAGCCTATGAAGCTGTCGCTCTAGTCAGAGTAGAGGTCGACAAG
CTCTCAGAAAAGATTGTTGCCTTGGAGAGAGCTGTTCGTGGTGGCAATAAGGTTGTGGAC
AAGGAATTTGTTGTATTGACAGAGTTGCTTATGGTTCAGTTGCTTCAATTGGATACTATT
GAGGCTGATGGAGAAGCAAAAGTACAGAGACGGATTGAGGTTTGTCGTATTCAGAGCTTT
GTGGACACACTAGACAATCTAAAGGCAAGAAACTCCAATCCTTTTAACAACAGTACCAAT
GCAGTGTCGGTGACTACCAAATGGGTGGCCTTTGAGTCAGGAATAGGAAGCTTGAGCGCT
CCAACCCCATTGCAATCTTCTACGAAAATAACTCAGGACTGGGAACTCTTTGACTAG

Peptide Sequence

PEP ID

VIT_06s0004g06960.t01
PEP Infomation

pep chromosome:12X:6:7674754:7678369:1 gene:VIT_06s0004g06960 transcript:VIT_06s0004g06960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLVQKRNAGDAASSPMIKIKVSHGSYHHYITIPAQSTFGDLKRVLAHETGLEPKEQRLLF
RGKEKENDECLHMVGVKEMSKVILLEDPASKEKKLEEMKKDQGILKAYEAVALVRVEVDK
LSEKIVALERAVRGGNKVVDKEFVVLTELLMVQLLQLDTIEADGEAKVQRRIEVCRIQSF
VDTLDNLKARNSNPFNNSTNAVSVTTKWVAFESGIGSLSAPTPLQSSTKITQDWELFD

Transcript Sequence

Transcript ID

VIT_06s0004g06960.t01
Transcript Infomation

cdna chromosome:12X:6:7674754:7678369:1 gene:VIT_06s0004g06960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGATTGATTGGGAACTCAGGCCTGGTGGTATGCTTGTCCAAAAGAGGAATGCTGGGGATG
CTGCTTCTAGTCCTATGATCAAGATCAAGGTCTCCCATGGTTCTTATCATCACTATATCA
CCATCCCTGCTCAGTCTACTTTTGGGGATCTGAAAAGGGTTCTTGCCCATGAGACTGGTC
TGGAGCCTAAGGAGCAGAGACTTTTGTTTAGAGGGAAAGAAAAGGAAAATGATGAATGCT
TGCACATGGTGGGTGTAAAAGAAATGTCCAAGGTGATACTATTAGAGGACCCAGCTAGCA
AAGAGAAGAAGCTTGAGGAAATGAAGAAAGATCAGGGCATATTAAAAGCCTATGAAGCTG
TCGCTCTAGTCAGAGTAGAGGTCGACAAGCTCTCAGAAAAGATTGTTGCCTTGGAGAGAG
CTGTTCGTGGTGGCAATAAGGTTGTGGACAAGGAATTTGTTGTATTGACAGAGTTGCTTA
TGGTTCAGTTGCTTCAATTGGATACTATTGAGGCTGATGGAGAAGCAAAAGTACAGAGAC
GGATTGAGGTTTGTCGTATTCAGAGCTTTGTGGACACACTAGACAATCTAAAGGCAAGAA
ACTCCAATCCTTTTAACAACAGTACCAATGCAGTGTCGGTGACTACCAAATGGGTGGCCT
TTGAGTCAGGAATAGGAAGCTTGAGCGCTCCAACCCCATTGCAATCTTCTACGAAAATAA
CTCAGGACTGGGAACTCTTTGACTAGCCCTCTTGTTGGGTTTGTGTAACTGACTTTGAGG
TATATATGTATAAAGAGATATGTGATAGGACTTGGGAACTCTTCTGAGACAGCAATCTCT
GTTTGTTTTTCCCCCCCTTTTTTCTTCTATGGCTGAAATGCTATTTCCATAGAAATGGTA
AGAGGTCTCAGTGAATGCCAAGGACACTGCAGCCATGTTTTAACTGGGTTGGCATTTGTA
TATATGGTTTTTATGTTATACTAATACTCAGAGCTGCTCGTCCCTTTTATAA