Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06940.t01
CDS Infomation

cds chromosome:12X:6:7660568:7661921:-1 gene:VIT_06s0004g06940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTCGTGCGTAGGCGATACGGCTCGGGCACTGGCCTGCCGGGACGGAAGAGCAGCG
GCGCACCTGAAGCTGGTATCAATCTTCGTAATCTTCATCACCAGTGTGGTGGGCATCTCC
TCCCCGGTGATGCTTGCCCGGGTTTTCCAAGGCAAACCCATGTACGACAAGGCGATTCTC
ATCATCAAGTGCTTCGCCGCCGGCGTGATTCTCTCCACCTCCCTCGTCCACGTCCTCCCT
GACGCCTTCGCCGCCCTCTCCGACTGCCACGTCGCCTCCCACCACCCCTGGAAGGACTTC
CCTTTCTCCGGCCTCGTCACCATGATCGGCGCCATCCTCGCCCTCCTCGTCGACCTCACC
GCCTCCGCCCATGTCGACAGCCACAAGCCCAGTCACTACACCCCAATTGGGACCCAAGAA
GAATTGCCCACTCACGCCAAGAAATTGACCGAGTTCCGGGTTGAAACGGCGGTACTGTCG
GTGAGTTGCCCTGACAAACAAGGTGAAGAGCTGGTGAAGCTGAAGCAGAGACTGGTGTCT
CAAGTATTGGAGATTGGAATCATATTCCACTCGGTCATCATAGGCGTTACCATGGGTATG
TCTCAAAATCAATGCACCATCAGACCTCTCGTCGCTGCCCTCGCCTTCCACCAGATTTTT
GAGGGTTTGGGCCTCGGAGGCTGCATTGCTCAGGCGGGTTTCAACTTTGGAACAACAGCG
TATATGTGCTTTATGTTTGCAGTGACGACTCCAATGGGAATTGTACTGGGAATGATCATA
TTTTCTGCGACAGGTTACGATGACAGTAGTGCGAATGCTTTGATCATGGAGGGGCTGCTG
GGGTCCTTATCATCGGGTATACTCATATACATGGCCCTTGTTGATCTCATTGCAGTAGAT
TTCTTCCACAACAAGATGATGGCTTCAGCTCCATTGTTGAAGAAGGCTTCTTTCATTGCC
TTGACCCTTGGCTCCGTCTCCATGTCTGTTCTGGCCCTTTGGGCCTGA

Peptide Sequence

PEP ID

VIT_06s0004g06940.t01
PEP Infomation

pep chromosome:12X:6:7660568:7661921:-1 gene:VIT_06s0004g06940 transcript:VIT_06s0004g06940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASCVGDTARALACRDGRAAAHLKLVSIFVIFITSVVGISSPVMLARVFQGKPMYDKAIL
IIKCFAAGVILSTSLVHVLPDAFAALSDCHVASHHPWKDFPFSGLVTMIGAILALLVDLT
ASAHVDSHKPSHYTPIGTQEELPTHAKKLTEFRVETAVLSVSCPDKQGEELVKLKQRLVS
QVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGLGLGGCIAQAGFNFGTTA
YMCFMFAVTTPMGIVLGMIIFSATGYDDSSANALIMEGLLGSLSSGILIYMALVDLIAVD
FFHNKMMASAPLLKKASFIALTLGSVSMSVLALWA

Transcript Sequence

Transcript ID

VIT_06s0004g06940.t01
Transcript Infomation

cdna chromosome:12X:6:7660568:7661921:-1 gene:VIT_06s0004g06940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCACAATCGCCAACGCTTTCTTCTCTCTCTGGCCCTCTCTCTTTCTCTCTCTGTCTCTCT
CAGAGTATTGAATTTTTGGAGCCAATGGCCTCGTGCGTAGGCGATACGGCTCGGGCACTG
GCCTGCCGGGACGGAAGAGCAGCGGCGCACCTGAAGCTGGTATCAATCTTCGTAATCTTC
ATCACCAGTGTGGTGGGCATCTCCTCCCCGGTGATGCTTGCCCGGGTTTTCCAAGGCAAA
CCCATGTACGACAAGGCGATTCTCATCATCAAGTGCTTCGCCGCCGGCGTGATTCTCTCC
ACCTCCCTCGTCCACGTCCTCCCTGACGCCTTCGCCGCCCTCTCCGACTGCCACGTCGCC
TCCCACCACCCCTGGAAGGACTTCCCTTTCTCCGGCCTCGTCACCATGATCGGCGCCATC
CTCGCCCTCCTCGTCGACCTCACCGCCTCCGCCCATGTCGACAGCCACAAGCCCAGTCAC
TACACCCCAATTGGGACCCAAGAAGAATTGCCCACTCACGCCAAGAAATTGACCGAGTTC
CGGGTTGAAACGGCGGTACTGTCGGTGAGTTGCCCTGACAAACAAGGTGAAGAGCTGGTG
AAGCTGAAGCAGAGACTGGTGTCTCAAGTATTGGAGATTGGAATCATATTCCACTCGGTC
ATCATAGGCGTTACCATGGGTATGTCTCAAAATCAATGCACCATCAGACCTCTCGTCGCT
GCCCTCGCCTTCCACCAGATTTTTGAGGGTTTGGGCCTCGGAGGCTGCATTGCTCAGGCG
GGTTTCAACTTTGGAACAACAGCGTATATGTGCTTTATGTTTGCAGTGACGACTCCAATG
GGAATTGTACTGGGAATGATCATATTTTCTGCGACAGGTTACGATGACAGTAGTGCGAAT
GCTTTGATCATGGAGGGGCTGCTGGGGTCCTTATCATCGGGTATACTCATATACATGGCC
CTTGTTGATCTCATTGCAGTAGATTTCTTCCACAACAAGATGATGGCTTCAGCTCCATTG
TTGAAGAAGGCTTCTTTCATTGCCTTGACCCTTGGCTCCGTCTCCATGTCTGTTCTGGCC
CTTTGGGCCTGAATTTTAGTTTTGCTTGTTGAGAGTTG