Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06910.t01
CDS Infomation

cds chromosome:12X:6:7625822:7628115:1 gene:VIT_06s0004g06910 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTTGGAAGAAGTTACAGAGTTCATTTGACAACAGCAATGCAGATGCCAAACAACAA
AAACCAACAAATACAGTTAGAACACCAGAACCAAAACTAGCAGTGGAAAATTTGTGTCCA
AGGTCAGATTCCCCAGAATCTGCACCCAGAAAGGAAAGACCAGCAAGGATACCAAAACCT
CCACCAAGGCCTACCACTGCCACTCCACCTTCTCTCAAGGAAGTAAATGGCAACAAAGTG
CCATTAGCACCACCACCGCCACGGCCACCACCACTTCCATCAAAACTGCTGGCTGGATCA
AAGGCAGTGCGTCGTGTGCCAGAGGTGATGGAGTTCTACCGATCTCTTACAAGGAGAGAT
CCCCAGGTTGAAAGAGCCAATCCAGTAGGAATCCCAACAGTTGGAAATTCTAGGAACATG
ATTGGAGAAATTGAGAACCGCTCAAGTCATCTTATGGCTATAAAATCTGATGTGGAAACA
CAAGGGGAATTCATCAATTCATTAACAAGAGAGGTGGAGGCTGCAGCTTATACTGAGATT
TCTGATGTGGAGGCATTTGTGAAATGGCTGGATGAGGAACTATCCTACCTGGTTGATGAA
CGGGCAGTGCTCAAGCATTTTCCAAAGTGGCCAGAGAGGAAGGCAGATGCATTGCGGGAA
GCTGCTTTTAGCTACCGTGACCTGAAGAACCTTGAAGCTGAAGTTTCATCATTTGAGGAT
AACACAAAACAGCCTTTGACCCAATCACTCAGAAGGATCCAAGCATTGCAAGACAGAGTG
GAAAGAAGTGTTGCTAACATGGAAAAGATGAGAGATGGAGCAAGCAAGAGGTACAAGGAA
TTCCAGATCCCTTGGGAATGGATGCTGAACACAGGACTGATTGGTCAGATCAAAATAAGC
TCCACAAAGCTGGCCAAGAAATACATGAAAAGGATAATTAAAGAAATGCAGTCTATTGAA
TGTTCACAGGAAGACAATCTCATGCTTCAAGGTGTTCGATTTGCTTTTCGAGTTCACCAG
TTTGCAGGTGGTTTTGATGTGGATACAATGCATGCATTTGAAGAACTAAAGAGGGTTGGA
ACAGGCAGTAACAAACAACAGCATGCAGTTAACACAATTCAGGAGTGCTAG

Peptide Sequence

PEP ID

VIT_06s0004g06910.t01
PEP Infomation

pep chromosome:12X:6:7625822:7628115:1 gene:VIT_06s0004g06910 transcript:VIT_06s0004g06910.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLWKKLQSSFDNSNADAKQQKPTNTVRTPEPKLAVENLCPRSDSPESAPRKERPARIPKP
PPRPTTATPPSLKEVNGNKVPLAPPPPRPPPLPSKLLAGSKAVRRVPEVMEFYRSLTRRD
PQVERANPVGIPTVGNSRNMIGEIENRSSHLMAIKSDVETQGEFINSLTREVEAAAYTEI
SDVEAFVKWLDEELSYLVDERAVLKHFPKWPERKADALREAAFSYRDLKNLEAEVSSFED
NTKQPLTQSLRRIQALQDRVERSVANMEKMRDGASKRYKEFQIPWEWMLNTGLIGQIKIS
STKLAKKYMKRIIKEMQSIECSQEDNLMLQGVRFAFRVHQFAGGFDVDTMHAFEELKRVG
TGSNKQQHAVNTIQEC

Transcript Sequence

Transcript ID

VIT_06s0004g06910.t01
Transcript Infomation

cdna chromosome:12X:6:7625822:7628115:1 gene:VIT_06s0004g06910 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAGAAGACAGGAGAATGCCAAGAGACGATGATGACTCAGGCATCACCTTCCTCAATAA
AGAACTGGAATCATCACTGGCAAGAAATAATGCACTGGAGAAAGAGAATCAGGAACTGAA
ACAAGAAGTAGCGCGTCTTAAAGCACAGATAAGTTCTCTCAAAGCACACGATAATGAGAG
GAAATCCATGCTTTGGAAGAAGTTACAGAGTTCATTTGACAACAGCAATGCAGATGCCAA
ACAACAAAAACCAACAAATACAGTTAGAACACCAGAACCAAAACTAGCAGTGGAAAATTT
GTGTCCAAGGTCAGATTCCCCAGAATCTGCACCCAGAAAGGAAAGACCAGCAAGGATACC
AAAACCTCCACCAAGGCCTACCACTGCCACTCCACCTTCTCTCAAGGAAGTAAATGGCAA
CAAAGTGCCATTAGCACCACCACCGCCACGGCCACCACCACTTCCATCAAAACTGCTGGC
TGGATCAAAGGCAGTGCGTCGTGTGCCAGAGGTGATGGAGTTCTACCGATCTCTTACAAG
GAGAGATCCCCAGGTTGAAAGAGCCAATCCAGTAGGAATCCCAACAGTTGGAAATTCTAG
GAACATGATTGGAGAAATTGAGAACCGCTCAAGTCATCTTATGGCTATAAAATCTGATGT
GGAAACACAAGGGGAATTCATCAATTCATTAACAAGAGAGGTGGAGGCTGCAGCTTATAC
TGAGATTTCTGATGTGGAGGCATTTGTGAAATGGCTGGATGAGGAACTATCCTACCTGGT
TGATGAACGGGCAGTGCTCAAGCATTTTCCAAAGTGGCCAGAGAGGAAGGCAGATGCATT
GCGGGAAGCTGCTTTTAGCTACCGTGACCTGAAGAACCTTGAAGCTGAAGTTTCATCATT
TGAGGATAACACAAAACAGCCTTTGACCCAATCACTCAGAAGGATCCAAGCATTGCAAGA
CAGAGTGGAAAGAAGTGTTGCTAACATGGAAAAGATGAGAGATGGAGCAAGCAAGAGGTA
CAAGGAATTCCAGATCCCTTGGGAATGGATGCTGAACACAGGACTGATTGGTCAGATCAA
AATAAGCTCCACAAAGCTGGCCAAGAAATACATGAAAAGGATAATTAAAGAAATGCAGTC
TATTGAATGTTCACAGGAAGACAATCTCATGCTTCAAGGTGTTCGATTTGCTTTTCGAGT
TCACCAGTTTGCAGGTGGTTTTGATGTGGATACAATGCATGCATTTGAAGAACTAAAGAG
GGTTGGAACAGGCAGTAACAAACAACAGCATGCAGTTAACACAATTCAGGAGTGCTAGAA
TGCTACTTTGGTGCAAAGAACTTTTGTGAACTAGCGTATCAGAAGTTTTCTGTGTTTGAA
TGTATTGGTGGAGATCCCACATAAGTTTCTTATATTATAAATTTGATTTTCCAGGCATAT
ATCAAGTAGCATAAACCCCAA