Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06870.t01
CDS Infomation

cds chromosome:12X:6:7599705:7605513:1 gene:VIT_06s0004g06870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGGACGATGAACGAGAAGAGAGAGAGTTGGATCTCACCTCGCCTGAGGTTGTTACC
AAGTATAAAACCGCTGCTGAAATTGTCAACAAGGCCTTGCAGGTGGTGCTGTCGGAATGC
AAACCGAAAGCCAAGATTGTAGACGTATGCGAAAAGGGCGATGCATTCATCAGAGAGCAA
ACTGGGAATGTGTACAAAAATGTCAAGAAGAAGATCGAGAGGGGTGTTGCATTTCCGACT
TGCATTTCAGTAAACAACACTGTTTGTCACTTCTCACCACTGTCAAGTGATGAGACATTG
TTGGAAGCAGGTGATATATTAAAGATCGATATGGGATGTCACATAGATGGGTTTATTGCA
GTAGTAGCCCATACTCATGTTCTCCAAGATGGGCCAGTGACAGGTAGAGCAGCTGATGTT
ATTGCAGCAGCAAACACTGCTGCTGAAGTTGCATTGAGACTTCTGAGGCCTGGAAGGAAG
AACAAGGAAGTAACAGATGCTATTCAGAAGGTGGCTGCTGCCTATGACTGCAAGATTGTT
GAAGGTGTTCTCAGTCACCAACTAAAACAGTTTGTGATTGATGGGAACAAGGTTGTATTG
AGTGTGCCCAGTGGTGAAACCCGAGTTGATGATGCAGAATTTGAAGAGAATGAAGTTTAT
GCAGTTGATATAGTCATCAGCTCTGGTGATGGAAAACCTAGGCTGTTGGATGAGCGGCAA
ACAACCATATATAAAAGAGCAGTGGACAAAAATTATCACTTGAAAATGAAGTCGTCAAGG
TTTATCTTCAGTGAAATAAATCAAAAGTTCCCCATCATGCCATTTACAGCCAGGGCTTTG
GAAGAGAAGAGGGCTCGTCTGGGTCTAGTGGAATGTGTGAACCATGATCTTTTGCAGCCA
TACCCTGTTCTCCATGAGAAGCCTGGTGATTTTGTTGCCCATATTAAATTCACAGTTCTG
TTAATGCCAAATGGGTCGGACAGGATCACATCCCATCCTTTGCAGGAGCTGCGGCCCACC
AAGACAATAGACAATGACCCTGAAATCAAGGCTTGGTTGGCACTTGGGACAAAGACAAAG
AAGAAAGGTGGTGGGAAAAAGAAGAAAGGTAAGAAAGGTGACAAAACAGAGAATTCAGGC
GAAGCCGAACCCATGGATGCAGCATCTCAAGAATGA

Peptide Sequence

PEP ID

VIT_06s0004g06870.t01
PEP Infomation

pep chromosome:12X:6:7599705:7605513:1 gene:VIT_06s0004g06870 transcript:VIT_06s0004g06870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSDDEREERELDLTSPEVVTKYKTAAEIVNKALQVVLSECKPKAKIVDVCEKGDAFIREQ
TGNVYKNVKKKIERGVAFPTCISVNNTVCHFSPLSSDETLLEAGDILKIDMGCHIDGFIA
VVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLLRPGRKNKEVTDAIQKVAAAYDCKIV
EGVLSHQLKQFVIDGNKVVLSVPSGETRVDDAEFEENEVYAVDIVISSGDGKPRLLDERQ
TTIYKRAVDKNYHLKMKSSRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHDLLQP
YPVLHEKPGDFVAHIKFTVLLMPNGSDRITSHPLQELRPTKTIDNDPEIKAWLALGTKTK
KKGGGKKKKGKKGDKTENSGEAEPMDAASQE

Transcript Sequence

Transcript ID

VIT_06s0004g06870.t01
Transcript Infomation

cdna chromosome:12X:6:7599705:7605513:1 gene:VIT_06s0004g06870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCTCTTTAAACCCTAGCTCAACCCTACCCTTTTGATCCTTTCCTTTGCTTTTGTCCATT
CTTCGAATTACTTGGTTCTTGGGTATTTGTAGCTTTGGTGAATATGTCGGACGATGAACG
AGAAGAGAGAGAGTTGGATCTCACCTCGCCTGAGGTTGTTACCAAGTATAAAACCGCTGC
TGAAATTGTCAACAAGGCCTTGCAGGTGGTGCTGTCGGAATGCAAACCGAAAGCCAAGAT
TGTAGACGTATGCGAAAAGGGCGATGCATTCATCAGAGAGCAAACTGGGAATGTGTACAA
AAATGTCAAGAAGAAGATCGAGAGGGGTGTTGCATTTCCGACTTGCATTTCAGTAAACAA
CACTGTTTGTCACTTCTCACCACTGTCAAGTGATGAGACATTGTTGGAAGCAGGTGATAT
ATTAAAGATCGATATGGGATGTCACATAGATGGGTTTATTGCAGTAGTAGCCCATACTCA
TGTTCTCCAAGATGGGCCAGTGACAGGTAGAGCAGCTGATGTTATTGCAGCAGCAAACAC
TGCTGCTGAAGTTGCATTGAGACTTCTGAGGCCTGGAAGGAAGAACAAGGAAGTAACAGA
TGCTATTCAGAAGGTGGCTGCTGCCTATGACTGCAAGATTGTTGAAGGTGTTCTCAGTCA
CCAACTAAAACAGTTTGTGATTGATGGGAACAAGGTTGTATTGAGTGTGCCCAGTGGTGA
AACCCGAGTTGATGATGCAGAATTTGAAGAGAATGAAGTTTATGCAGTTGATATAGTCAT
CAGCTCTGGTGATGGAAAACCTAGGCTGTTGGATGAGCGGCAAACAACCATATATAAAAG
AGCAGTGGACAAAAATTATCACTTGAAAATGAAGTCGTCAAGGTTTATCTTCAGTGAAAT
AAATCAAAAGTTCCCCATCATGCCATTTACAGCCAGGGCTTTGGAAGAGAAGAGGGCTCG
TCTGGGTCTAGTGGAATGTGTGAACCATGATCTTTTGCAGCCATACCCTGTTCTCCATGA
GAAGCCTGGTGATTTTGTTGCCCATATTAAATTCACAGTTCTGTTAATGCCAAATGGGTC
GGACAGGATCACATCCCATCCTTTGCAGGAGCTGCGGCCCACCAAGACAATAGACAATGA
CCCTGAAATCAAGGCTTGGTTGGCACTTGGGACAAAGACAAAGAAGAAAGGTGGTGGGAA
AAAGAAGAAAGGTAAGAAAGGTGACAAAACAGAGAATTCAGGCGAAGCCGAACCCATGGA
TGCAGCATCTCAAGAATGAGGAATTTTCCATTCTCAGAGCTTGTTTTGGCTGGTTGCAGA
CTTGCAGTTAAAAAGGTTCCTAGAAGGAGAACCCTGACATGAAGCTCTGTTGGGGGTTCT
GGTGTGTGTGTGTGTGGGGGCTGGGGTTGGGGTTGATGTAATATAATGCACATATGCATC
CTTTCCCCATTCCAATACTTGTTCCTCTTAACTTTCCAAATTGTCCACACACAGTGTGAA
ACAAAGAGATGCATAAATATTTTTCAGGCTTCAAAATACATGTTCAAGATGTAATGAATG
TTGTTTTTGTTGAAAATTGG