Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06840.t01
CDS Infomation

cds chromosome:12X:6:7567079:7569424:1 gene:VIT_06s0004g06840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTGCTCGGTTGCAGTGAACAACTCCCCTGTCTTCTCTCCCTCTTCCTCTCTCTTC
TGCAAAACCTCAGTCTCTTCTCCTGAAACCCTGACGCGTCACCACCATGTCTCTTCGCCC
TCCTCGCCATCTTCTCCCTTTAGGCTTAGGCTTCCCAAGTCCTTGACTGGGCTGAGGCCC
TGCAAGGAGGGGCCTGCTTCTTCTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTTCGGCT
TCGGCGTCTTCGCCCACGGTTTTGAAGCGAAAGAGGCCCGCGAGGTTGGATATTCCGATT
GCGTCGTTGAGTTTTCCGGCGCCGGTTCCGGTGGGTGAGGGGTGTAGGGAGGCGGTGGAG
GATGAGAGAGACGGGTATTATTCCGTGTATTGCAAGAGGGGGAGGAGAGAAGCTATGGAG
GATCGCTACTCGGCTGTGGTTGACCTTCAAGGAGACCACAAACAGGCTTTCTTTGGTATT
TTTGATGGGCATGGTGGTGCAAAAGCTGCTGAATTTGCAGCACAAAATTTGAAAAACAAC
ATCTTAGATGAAGTGGTGAGAAGAGGTGACGATGAAATTGAAGAGTCAGTAAAACACGGT
TACTTGAACACGGATTCTGATTTTCTAAAGGAGGATCTCCGCGGTGGATCATGCTGTGTG
ACAGCTTTGATCCGGAATGGCAAACTTGCTGTGTCAAATGCTGGTGACTGTCGCGCTGTT
ATGAGCAGAGGGGGAATTGCCAAGGCCCTCACTTCTGATCATCGGCCTTCGAGAGAGGAT
GAAAAGAGCAGAATTGAAAAGCTGGATGGCTATGTTGATTGCTACCATGGTGTTTGGAGA
ATTCAGGGATCTTTGGCTGTATCCCGAGGAATTGGCGATCGTCATCTTAAGCAGTGGGTA
ACTGCAGAGCCAGAGACAAAAATCCTTGCAATTCAACCTGACTATGAGTTCTTAATCCTT
GCTTCTGATGGATTGTGGGATAAGGTTACTAACCAAGAAGCAGTGGACATTTCTCGTCCT
TTTTGCATCGGTGTTGATAAGCCAGATCCTTTGTTTGCCTGTAAAAAGCTCGTAGACCTC
TCTGTTTCACGAGGCTCAACTGATGATATCAGTGTGATGCTAATTCGGTTGGGCCAGTAT
ATCTGA

Peptide Sequence

PEP ID

VIT_06s0004g06840.t01
PEP Infomation

pep chromosome:12X:6:7567079:7569424:1 gene:VIT_06s0004g06840 transcript:VIT_06s0004g06840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MACSVAVNNSPVFSPSSSLFCKTSVSSPETLTRHHHVSSPSSPSSPFRLRLPKSLTGLRP
CKEGPASSSSSSAAAAAASASASSPTVLKRKRPARLDIPIASLSFPAPVPVGEGCREAVE
DERDGYYSVYCKRGRREAMEDRYSAVVDLQGDHKQAFFGIFDGHGGAKAAEFAAQNLKNN
ILDEVVRRGDDEIEESVKHGYLNTDSDFLKEDLRGGSCCVTALIRNGKLAVSNAGDCRAV
MSRGGIAKALTSDHRPSREDEKSRIEKLDGYVDCYHGVWRIQGSLAVSRGIGDRHLKQWV
TAEPETKILAIQPDYEFLILASDGLWDKVTNQEAVDISRPFCIGVDKPDPLFACKKLVDL
SVSRGSTDDISVMLIRLGQYI

Transcript Sequence

Transcript ID

VIT_06s0004g06840.t01
Transcript Infomation

cdna chromosome:12X:6:7567079:7569424:1 gene:VIT_06s0004g06840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAACCAAACAAACGGAATCAGAAAATAGAAAGACGAAAGCAAAAAAAAAATCATCGCA
AGCAAAGACAGAAACCAAAGAGAAAACGTTCCAGAAATCAATCAATGGCGTGCTCGGTTG
CAGTGAACAACTCCCCTGTCTTCTCTCCCTCTTCCTCTCTCTTCTGCAAAACCTCAGTCT
CTTCTCCTGAAACCCTGACGCGTCACCACCATGTCTCTTCGCCCTCCTCGCCATCTTCTC
CCTTTAGGCTTAGGCTTCCCAAGTCCTTGACTGGGCTGAGGCCCTGCAAGGAGGGGCCTG
CTTCTTCTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTTCGGCTTCGGCGTCTTCGCCCA
CGGTTTTGAAGCGAAAGAGGCCCGCGAGGTTGGATATTCCGATTGCGTCGTTGAGTTTTC
CGGCGCCGGTTCCGGTGGGTGAGGGGTGTAGGGAGGCGGTGGAGGATGAGAGAGACGGGT
ATTATTCCGTGTATTGCAAGAGGGGGAGGAGAGAAGCTATGGAGGATCGCTACTCGGCTG
TGGTTGACCTTCAAGGAGACCACAAACAGGCTTTCTTTGGTATTTTTGATGGGCATGGTG
GTGCAAAAGCTGCTGAATTTGCAGCACAAAATTTGAAAAACAACATCTTAGATGAAGTGG
TGAGAAGAGGTGACGATGAAATTGAAGAGTCAGTAAAACACGGTTACTTGAACACGGATT
CTGATTTTCTAAAGGAGGATCTCCGCGGTGGATCATGCTGTGTGACAGCTTTGATCCGGA
ATGGCAAACTTGCTGTGTCAAATGCTGGTGACTGTCGCGCTGTTATGAGCAGAGGGGGAA
TTGCCAAGGCCCTCACTTCTGATCATCGGCCTTCGAGAGAGGATGAAAAGAGCAGAATTG
AAAAGCTGGATGGCTATGTTGATTGCTACCATGGTGTTTGGAGAATTCAGGGATCTTTGG
CTGTATCCCGAGGAATTGGCGATCGTCATCTTAAGCAGTGGGTAACTGCAGAGCCAGAGA
CAAAAATCCTTGCAATTCAACCTGACTATGAGTTCTTAATCCTTGCTTCTGATGGATTGT
GGGATAAGGTTACTAACCAAGAAGCAGTGGACATTTCTCGTCCTTTTTGCATCGGTGTTG
ATAAGCCAGATCCTTTGTTTGCCTGTAAAAAGCTCGTAGACCTCTCTGTTTCACGAGGCT
CAACTGATGATATCAGTGTGATGCTAATTCGGTTGGGCCAGTATATCTGAAGATCCCCAT
TAACCCTAAGGGGAAGGAATTCACCTAACAAATAGGCAACTTATTTTTTCAGAGGAAACT
CAGTTCTCTCAAGGGCAGGGCTCTCCGGGTATAATTATGTTTTGCGGGTAGTGCCTGTGA
CTATGATAGATATGATGAAGAGGATCCATAGTTATACTGGAAGAGCCTTTATCTAGCTGA
CTATGTAACTTCGACACACCATTTTTTATTGATAGATCTACAAATAACTTTGATATGTAA
ATCAGTTGATTCTCTGTAAAACATTCTGTTGTATAGGGTGTTCCTTTTTCTTTGTT