Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06790.t01
CDS Infomation

cds chromosome:12X:6:7476208:7478569:1 gene:VIT_06s0004g06790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGGGACAGAAGTTTCATCATACCCTCCTCTGTTTCGTGAAGAGAAAGGGTCAATC
CATGGGGGGGTAGAGGGAGAAGAAGGGGTGAAGGTGGGGGGTGGTAGTTCAGAGTCAGAC
CCACTTCCAGTGATGGATCTTGAATGCATGGAGATGGAGAAGCTAGGAGAAGTGTGTAGA
GAGTGGGGCATTTTTCGGCTGGTCAACCATGGGATTCCTTTATCTCTATTGAGCCAACTC
GAGGACCATGCAAAAAGGCTGTTTGGGCTGCCTTTTGAATCCAAGGAGGCCGTCTTCACC
ACTCCTGTGTCCTACTTTTGGGGCACCCCTGCGCTTACCAAATCCGGAGTGGCCCTTTCA
CAGACCCCCCAAAATGTCAATTGGGTGGAAGGCTTCAATGTTCCTCTCTCTCAATTGCCC
CTGCTTCAGACCCAGGATCCCATCATTGCTTCCTTCAGACTTATCCTCGAGGAATATGGA
AGGCATTTGTCTAGAATTGCGAGAACTCTCTTTGAGGCTATGGCTAAGAACTTGGGACAT
GATCCAAAGCAATATGAGTCTAGTCTAGACGAATCTTCCGGAATCGTTCGAGTTTATAGA
TACCCATTACGCCCTAATCGTGACCATGCAAGCCACATGGAGGTGCACACGGACAGTTCT
GTGCTCTCAATTTTGAATCAGGATGAAGTCGGTGGCCTCGAAGTCTTGAAGGACGGTGAA
TGGCTAAGTGCAAGTCCAATTTCCAATACCTTGGTCATCAACGTTGGTGATATGATGCAG
GTTATAAGTAACGATAAGTACAAGAGCGTGATTCACAGAGTGAAGGTGGCAAAAGAGAGG
GAGCGGCTCTCGATATGTTACTTCGTGTTTCCAGAGGAAAACACCGTAATCAAAAGCTCT
AAGTATAGACCATTTTCGTATAATGATTTTCGTAGCCAAGTGCAGGAAGACATAAAGACC
TTAGGGCATAAGGTTGGGCTTAAACGGTTCAAGATTAATGATGATAGTGACTAA

Peptide Sequence

PEP ID

VIT_06s0004g06790.t01
PEP Infomation

pep chromosome:12X:6:7476208:7478569:1 gene:VIT_06s0004g06790 transcript:VIT_06s0004g06790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGTEVSSYPPLFREEKGSIHGGVEGEEGVKVGGGSSESDPLPVMDLECMEMEKLGEVCR
EWGIFRLVNHGIPLSLLSQLEDHAKRLFGLPFESKEAVFTTPVSYFWGTPALTKSGVALS
QTPQNVNWVEGFNVPLSQLPLLQTQDPIIASFRLILEEYGRHLSRIARTLFEAMAKNLGH
DPKQYESSLDESSGIVRVYRYPLRPNRDHASHMEVHTDSSVLSILNQDEVGGLEVLKDGE
WLSASPISNTLVINVGDMMQVISNDKYKSVIHRVKVAKERERLSICYFVFPEENTVIKSS
KYRPFSYNDFRSQVQEDIKTLGHKVGLKRFKINDDSD

Transcript Sequence

Transcript ID

VIT_06s0004g06790.t01
Transcript Infomation

cdna chromosome:12X:6:7476208:7478569:1 gene:VIT_06s0004g06790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAACTAGAGATAGTGGAGTAGAGAGTTGGGAGTGGGGGGGCATTGGCCATGGCAGGGACA
GAAGTTTCATCATACCCTCCTCTGTTTCGTGAAGAGAAAGGGTCAATCCATGGGGGGGTA
GAGGGAGAAGAAGGGGTGAAGGTGGGGGGTGGTAGTTCAGAGTCAGACCCACTTCCAGTG
ATGGATCTTGAATGCATGGAGATGGAGAAGCTAGGAGAAGTGTGTAGAGAGTGGGGCATT
TTTCGGCTGGTCAACCATGGGATTCCTTTATCTCTATTGAGCCAACTCGAGGACCATGCA
AAAAGGCTGTTTGGGCTGCCTTTTGAATCCAAGGAGGCCGTCTTCACCACTCCTGTGTCC
TACTTTTGGGGCACCCCTGCGCTTACCAAATCCGGAGTGGCCCTTTCACAGACCCCCCAA
AATGTCAATTGGGTGGAAGGCTTCAATGTTCCTCTCTCTCAATTGCCCCTGCTTCAGACC
CAGGATCCCATCATTGCTTCCTTCAGACTTATCCTCGAGGAATATGGAAGGCATTTGTCT
AGAATTGCGAGAACTCTCTTTGAGGCTATGGCTAAGAACTTGGGACATGATCCAAAGCAA
TATGAGTCTAGTCTAGACGAATCTTCCGGAATCGTTCGAGTTTATAGATACCCATTACGC
CCTAATCGTGACCATGCAAGCCACATGGAGGTGCACACGGACAGTTCTGTGCTCTCAATT
TTGAATCAGGATGAAGTCGGTGGCCTCGAAGTCTTGAAGGACGGTGAATGGCTAAGTGCA
AGTCCAATTTCCAATACCTTGGTCATCAACGTTGGTGATATGATGCAGGTTATAAGTAAC
GATAAGTACAAGAGCGTGATTCACAGAGTGAAGGTGGCAAAAGAGAGGGAGCGGCTCTCG
ATATGTTACTTCGTGTTTCCAGAGGAAAACACCGTAATCAAAAGCTCTAAGTATAGACCA
TTTTCGTATAATGATTTTCGTAGCCAAGTGCAGGAAGACATAAAGACCTTAGGGCATAAG
GTTGGGCTTAAACGGTTCAAGATTAATGATGATAGTGACTAAAAGTTTATTAGGTTCAAG
GGAGCTTACCATATTTGATTTGTAACCGTAATGTTAAATAAACAAAGGGCCCATGACCCC
AAATGGTCCCATGGTTCAATGAATTAATAAAGCTCTTAACTATATTCTTAGCTCAAA