Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06580.t01
CDS Infomation

cds chromosome:12X:6:7313387:7316396:1 gene:VIT_06s0004g06580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGTGGAGCAGAAGCAGCCCAACATGGGTCGGCGGGGATTGGTGGTGGGGAACTAC
TGCCACGACGTTCTGATCCGGAACGACGTCGTTGTGGGGGAGACTCTCGGTGGCGCCGCG
TCCTTCATCTCCAATGTCCTCGACGGGGTTTCGATTCGCTGTGATTTGGTCTCCAAAGTG
GGCTCCGACTTCGCCTACTCCGTGGCTCACCCCCCAATTGTGGTGCCCACTTCGCCGACC
ACGCTCTTCCACGCCTTTTTTGATTCGGGTAGCGACGGCGAGGGGGCCTGCGACCGGGTT
CTCAAGCGCGTCCGTTTTTGTGGTGCGATTGAACCGTCGGATCTGCCGGAGTCGAGGTTT
AATTTCGGGATGGCCGTTGGCGTCGCCGGAGAGATATTGCCGGAGACTCTGGAGCGGATG
CTTGATATATGTGAGGTTGTGTTTGTTGACATCCAGGCTTTGATTCGAGTGTTTGATTCC
AGTGATGGGACGGTGAGGCTTGTGGGGCTGAAAGGGAGTGGGTTCTTTCACCTTCTACCA
CGAATTGGGTTCTTGAAGGCCTCTGCAGAGGAAGCTCCGTATGTAGATGTTGAGGAGGCG
AGGAAATGGTGCTGTGTTCTCATAACAAACGGGAAGGAAGGTTGTACCTTGTATTGGAAG
GATGGGGAAATGCAGATATCACCATTTCCGACAGTTCAGATTGATCCCACCGGCGCTGGA
GATAGTTTTCTAGGCGGGTTTGTTGCTGGGCTTGTTCAGGGATTGGCAGTGCCAGATGCA
GCCCTACTGGGGAACCTTTTCGGGTCCATGACTGTAGGCCAAATTGGATTGCCCAAGTTC
GAATTGAGGTTGCTGCAGAGAGTTAAGGATGAGGTGCAGAGGAGGAAGATGCAAAGCATC
AGCTGCTGTGAAGATAGCAATGATGATTTAAAGTTTGTGAAACCAGCAGGGCACCAGCAG
TTCCATTCATCCCTTGCTGCAGCCAAACTAACATCCGCTGCTCCCCTCCAGGAATGTCAA
TGGGATCTGCGAAACTCTCCTCCTAGAGCCATAGAGCAAGGTATCCCCCAGTACACTGGA
CAGCAGAAGCTACTACTTAATCCCGTCTATGAAGAACCGATACAATCAGTTGAAGGTACA
CAGTGA

Peptide Sequence

PEP ID

VIT_06s0004g06580.t01
PEP Infomation

pep chromosome:12X:6:7313387:7316396:1 gene:VIT_06s0004g06580 transcript:VIT_06s0004g06580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLVEQKQPNMGRRGLVVGNYCHDVLIRNDVVVGETLGGAASFISNVLDGVSIRCDLVSKV
GSDFAYSVAHPPIVVPTSPTTLFHAFFDSGSDGEGACDRVLKRVRFCGAIEPSDLPESRF
NFGMAVGVAGEILPETLERMLDICEVVFVDIQALIRVFDSSDGTVRLVGLKGSGFFHLLP
RIGFLKASAEEAPYVDVEEARKWCCVLITNGKEGCTLYWKDGEMQISPFPTVQIDPTGAG
DSFLGGFVAGLVQGLAVPDAALLGNLFGSMTVGQIGLPKFELRLLQRVKDEVQRRKMQSI
SCCEDSNDDLKFVKPAGHQQFHSSLAAAKLTSAAPLQECQWDLRNSPPRAIEQGIPQYTG
QQKLLLNPVYEEPIQSVEGTQ

Transcript Sequence

Transcript ID

VIT_06s0004g06580.t01
Transcript Infomation

cdna chromosome:12X:6:7313387:7316396:1 gene:VIT_06s0004g06580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTATGAAAAAGTTGTGCGATCGAAAATTTTTTACAAACCCTTTTGGATGTAAAATATCGA
CAGATGGTTGTGTACGTAACAAGAAAATCTGGAGACTATTTAGGGGTGTTTTGGCATTCC
CTGTGGAACAGGTTTCTTCTGGGAAAAAGGAGGAAAATGATAGAAAATTAAGGGTATCAG
TCACTTTCCTAAGGTTCGCAGTTCAAAGCAGCCAACATCGTCCTCAAATATTTCCGTCAA
CGTATTGTTAAATTGCAAGAATCAAAACCAAATATTTCTCTATATATTATCACTGTCTAA
CATTTTTGACGCGTCTCGTGTGTCAGAGGAGACGCATTTCAGTCGCAGACACGCCCACGA
AGCATCGCTTTGTCCTCTTCCCATTTCGTGCTGTTTCATCCCCTTTCATGGGGTTTCTGA
AAACCTAAATCTTTCACCCATTTTCGGGGCATTCATATTCATATCATAACGTGTAGAATC
TGACCTTGGAGCCCTTTTTTGTTTTCTTTGCGGAACCTCTCATGTTGGTGGAGCAGAAGC
AGCCCAACATGGGTCGGCGGGGATTGGTGGTGGGGAACTACTGCCACGACGTTCTGATCC
GGAACGACGTCGTTGTGGGGGAGACTCTCGGTGGCGCCGCGTCCTTCATCTCCAATGTCC
TCGACGGGGTTTCGATTCGCTGTGATTTGGTCTCCAAAGTGGGCTCCGACTTCGCCTACT
CCGTGGCTCACCCCCCAATTGTGGTGCCCACTTCGCCGACCACGCTCTTCCACGCCTTTT
TTGATTCGGGTAGCGACGGCGAGGGGGCCTGCGACCGGGTTCTCAAGCGCGTCCGTTTTT
GTGGTGCGATTGAACCGTCGGATCTGCCGGAGTCGAGGTTTAATTTCGGGATGGCCGTTG
GCGTCGCCGGAGAGATATTGCCGGAGACTCTGGAGCGGATGCTTGATATATGTGAGGTTG
TGTTTGTTGACATCCAGGCTTTGATTCGAGTGTTTGATTCCAGTGATGGGACGGTGAGGC
TTGTGGGGCTGAAAGGGAGTGGGTTCTTTCACCTTCTACCACGAATTGGGTTCTTGAAGG
CCTCTGCAGAGGAAGCTCCGTATGTAGATGTTGAGGAGGCGAGGAAATGGTGCTGTGTTC
TCATAACAAACGGGAAGGAAGGTTGTACCTTGTATTGGAAGGATGGGGAAATGCAGATAT
CACCATTTCCGACAGTTCAGATTGATCCCACCGGCGCTGGAGATAGTTTTCTAGGCGGGT
TTGTTGCTGGGCTTGTTCAGGGATTGGCAGTGCCAGATGCAGCCCTACTGGGGAACCTTT
TCGGGTCCATGACTGTAGGCCAAATTGGATTGCCCAAGTTCGAATTGAGGTTGCTGCAGA
GAGTTAAGGATGAGGTGCAGAGGAGGAAGATGCAAAGCATCAGCTGCTGTGAAGATAGCA
ATGATGATTTAAAGTTTGTGAAACCAGCAGGGCACCAGCAGTTCCATTCATCCCTTGCTG
CAGCCAAACTAACATCCGCTGCTCCCCTCCAGGAATGTCAATGGGATCTGCGAAACTCTC
CTCCTAGAGCCATAGAGCAAGGTATCCCCCAGTACACTGGACAGCAGAAGCTACTACTTA
ATCCCGTCTATGAAGAACCGATACAATCAGTTGAAGGTACACAGTGAAGCCTCTGCAGAA
CATGACCTCCCTTTTTATTAGTCTGAATAAAGTCTATGCTTTGGCTAGCAAAGAGATCTC
TAAGCACTGCATTTTGTTTTGATCATTCAATCCGAAGCCCAACCTCTCTCAATGTGCAAG
GGTTGCAAGTGGCTGCTGATTGTCCTTTCACATATGTAGTGCATGGCATTCTTGACTAAC
ACTTAGAAACTGAGTTGGTTAAGATGAAATGTTAATGCTAACCATACATCTAATAAAGAA
AGAGAAGTCTCAAATCTTTCATACCCAGTTCTAGAATATCATTGAATGTTTCTTCAGTGA
ATAGTTGATGATCGAGGGATTTGTAATGAGTCATTGGGACATATCCCATGGTTGTCTCAA
TCATGAGTTGCACAGAATTTAACTTGGTGCTAGGCTTGAATCCATGGATCTGGTGTAAGG
ACTAAGGAGTTAAACACTTCAATTA