Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06500.t01
CDS Infomation

cds chromosome:12X:6:7218231:7233587:1 gene:VIT_06s0004g06500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAATTGATCCAATATTTCAGGGAGCGGGAGTTAAGGCTGGTTTAGAAATCTGGTGC
ATTGAGAACTTACGGTTGGTTCTGGTCCCAAAATCTTCATATGGGAAATTCTTCAGTGGG
AGTGCATATATAATTCTGAATACAGTCTTGCTCAAAAGCAGCTCTCCTCAACATGACATA
CATTATTGGCTGGGAAATGATGCAAAAGAGGTGGATTCAGCACTGGCATCAGACAAAGCA
CTTGAATTGGATGCAGCCCTAGGGTCCCAAGCAGTGCAATTTAGGGAAATTCAAGGTCTG
GAAACTGAGAAGTTTTTGTCATACTTTAAACCTTGTATCATACCCATTGAAGGTGTATTT
TCTTCTGGACCGGGAGAATTAAATTGTGAGACATACCAAATCAGCCTGTTTACATGCAAG
GGGGATCATGTTGTTCATATTAAAGAAGTTCCCTTTTCTCGGTCATCCTTGAACCACAAT
GATGTATTCATACTTGATACAGCATCAAAAATTTTCCTCTTTAGCGGATGTAACTCCAGC
ATACAAGAAAGAGCTAAAGCTCTGGAGGTTGTTCAGTATATCAAAGAGAATAAGCATAAT
GGGAAGTGCGAGGTCGCAACTATAGAGGATGGAAAATTTGTTGGTGATCCTGATGTTGGG
GAATTCTGGGGCTTATTTGGTGGTTATGCTCCTATTCCTCGAGACATACCTCCTTCCCTT
CAAAAACAACCTGATATTCCAAATGCAAAACTATTCTGGATAGCTACCCAAGGAAAACTA
TGCCAAACTGTGTGTAACATGTTGAACAAAGAAATGCTCGAATCAAACAAGTGCTACATG
TTGGACTGTGACAATGAGATTTTTGTTTGGATGGGAAGAAATACCTCAATTACAGAACGG
AAAACTTCAATCTCAGCTGCAGAAGATTTCCTCAAATCTCAGGGCAGGTCAACAAGAAGC
CATTTAACTTCCCTAACCGAAGGATCAGAAACTGCCATATTTAGGTCATATTTTGATGTG
TGGCCTCAATTGGCTGAGCCCAGGCTGTATGAAGAAGGTCGAGGGAAAGTAGCAGCAATG
TTCAAGCAACAAGGCTATGACGTGAAGGAGCTTCCTGAAGAAGACTGTGATTCTCTTATA
GACTGCAGTGGCACTCTAAAAGTCTGGCGTGTAAATGATGATGAGTTGTTCCTTGTCCCT
GTTGCCGAACAAACAAAGCTTTTCAGTGGTGACTGCTATATTGTGCAATACAAATATCCT
GGCAATGGAAGAGACGAATATTTATTTTATGCATGGCTTGGTCGTGGGGCTGTAATGGAA
GACAGAGTTGATGCTATCTCCCGTATGAATACTATTGTCGATTCAATGAAGGGAGATTCA
GTTGTGGGTCAAGTTATTGAGGAAAAGGAGCCTATTGAATTTTTCTTAATTTTTCAAACA
TTAATTGTTTTCAAGGGAGGTCTGAGCACACGTTACAAAAGATTTATAGCAGAAAAAGGT
ATTGCAGACGAAACTTATGATGAAAAAAAGACAGCTCTTTTTCGAGTTCAGGGAACGAGT
CCAAATAACATGCAAGCCATCCAAGTTGATCAAGTTTCAAGTTCCCTGAATTCATCCTAT
TGTTTCATCTTACAAACCGAAACATCTATCTTCACTTGGGTTGGGAACCTCTCCTCAACT
AGAGATCATGATCTTCTTGACAGAATGCTGGATCTAATAAATCCAACATTGCAACCTATA
TCAGTGAGGGAAGGTAGCGAACCTGATGTTTTCTGGAAAGCGCTTGGTGGAAAGGCAGAG
CATCCAAGGGAAAGGGAGATTAAGGCATATGTAGAAGACCCACATTTGTTTACATGTACC
TTTACTGATGGTGATCTTAAGGTGAAGGAGATATTCAACTTCACACAGGATGATCTGACT
ACAGAAGACAAGTTAATACTAGATTGCAACAGAGAAATTTATGTTTGGTGTGGCTGCCAT
TCAAATGTTAGATCAAAGAAACAAGCTCTTGAGATTGGTCTGAAATTTCTTGAGATAGAC
ATTCTGGTTGAAGGACTTTCCCTGGAGACTCCTATATATGTTGTTACAGAAGGTCATGAA
CCAACATTCTTCACTCGTTTCTTTGAATGGGATTCCTCCAAGGCAAATATGCATGGTAGC
TCATTTGAGCGGAGGCTGGCTATTTTGAAGGGAACAGCACAAAAGATAGAAGTACCTTTG
AGAAATTCATGGAAAGCATGCTCCACAGAGAATACCCCAGATAGTTTGAGAAGCAGATCG
GTCAGTTCTAATGGGCTGCGAAGAAGTGCATCTTCTGCCTTCAGTGTTTCTGGCTCAAAT
TTGAAGTCCTCAGACAACCACCAAATTTCAAGTGTATCTCCAATTGCAAGATCATTGTTT
TCAGGATCTTATCCTGATCATGACAGTGCTGATGGGTCACCAGTACCCCCACGGCCTACA
GCAGTTGTGCCAAGCTCCCCTTCTGAGAATGTAGGCCTTGATCAGATTGATGGAGTTAAG
ATTGATGTTAACTTGCTAATCTTCCCATATGAGCGTTTAAAAGTTGTGGCTGATGACCCA
GTAACAACAGGCATAGATGTGACCAAAAGAGAGGCATATTTGTCAGAAGAGGAGTTCCAG
CAGATATTTGGGATGACAAAAACAGCCTTCTACAAACTTCCCAAATGGCGACAGAACAAG
CTAAAGAGGTCTGTTCATCTATTCTAG

Peptide Sequence

PEP ID

VIT_06s0004g06500.t01
PEP Infomation

pep chromosome:12X:6:7218231:7233587:1 gene:VIT_06s0004g06500 transcript:VIT_06s0004g06500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEIDPIFQGAGVKAGLEIWCIENLRLVLVPKSSYGKFFSGSAYIILNTVLLKSSSPQHDI
HYWLGNDAKEVDSALASDKALELDAALGSQAVQFREIQGLETEKFLSYFKPCIIPIEGVF
SSGPGELNCETYQISLFTCKGDHVVHIKEVPFSRSSLNHNDVFILDTASKIFLFSGCNSS
IQERAKALEVVQYIKENKHNGKCEVATIEDGKFVGDPDVGEFWGLFGGYAPIPRDIPPSL
QKQPDIPNAKLFWIATQGKLCQTVCNMLNKEMLESNKCYMLDCDNEIFVWMGRNTSITER
KTSISAAEDFLKSQGRSTRSHLTSLTEGSETAIFRSYFDVWPQLAEPRLYEEGRGKVAAM
FKQQGYDVKELPEEDCDSLIDCSGTLKVWRVNDDELFLVPVAEQTKLFSGDCYIVQYKYP
GNGRDEYLFYAWLGRGAVMEDRVDAISRMNTIVDSMKGDSVVGQVIEEKEPIEFFLIFQT
LIVFKGGLSTRYKRFIAEKGIADETYDEKKTALFRVQGTSPNNMQAIQVDQVSSSLNSSY
CFILQTETSIFTWVGNLSSTRDHDLLDRMLDLINPTLQPISVREGSEPDVFWKALGGKAE
HPREREIKAYVEDPHLFTCTFTDGDLKVKEIFNFTQDDLTTEDKLILDCNREIYVWCGCH
SNVRSKKQALEIGLKFLEIDILVEGLSLETPIYVVTEGHEPTFFTRFFEWDSSKANMHGS
SFERRLAILKGTAQKIEVPLRNSWKACSTENTPDSLRSRSVSSNGLRRSASSAFSVSGSN
LKSSDNHQISSVSPIARSLFSGSYPDHDSADGSPVPPRPTAVVPSSPSENVGLDQIDGVK
IDVNLLIFPYERLKVVADDPVTTGIDVTKREAYLSEEEFQQIFGMTKTAFYKLPKWRQNK
LKRSVHLF

Transcript Sequence

Transcript ID

VIT_06s0004g06500.t01
Transcript Infomation

cdna chromosome:12X:6:7218231:7233587:1 gene:VIT_06s0004g06500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAATTGATCCAATATTTCAGGGAGCGGGAGTTAAGGCTGGTTTAGAAATCTGGTGC
ATTGAGAACTTACGGTTGGTTCTGGTCCCAAAATCTTCATATGGGAAATTCTTCAGTGGG
AGTGCATATATAATTCTGAATACAGTCTTGCTCAAAAGCAGCTCTCCTCAACATGACATA
CATTATTGGCTGGGAAATGATGCAAAAGAGGTGGATTCAGCACTGGCATCAGACAAAGCA
CTTGAATTGGATGCAGCCCTAGGGTCCCAAGCAGTGCAATTTAGGGAAATTCAAGGTCTG
GAAACTGAGAAGTTTTTGTCATACTTTAAACCTTGTATCATACCCATTGAAGGTGTATTT
TCTTCTGGACCGGGAGAATTAAATTGTGAGACATACCAAATCAGCCTGTTTACATGCAAG
GGGGATCATGTTGTTCATATTAAAGAAGTTCCCTTTTCTCGGTCATCCTTGAACCACAAT
GATGTATTCATACTTGATACAGCATCAAAAATTTTCCTCTTTAGCGGATGTAACTCCAGC
ATACAAGAAAGAGCTAAAGCTCTGGAGGTTGTTCAGTATATCAAAGAGAATAAGCATAAT
GGGAAGTGCGAGGTCGCAACTATAGAGGATGGAAAATTTGTTGGTGATCCTGATGTTGGG
GAATTCTGGGGCTTATTTGGTGGTTATGCTCCTATTCCTCGAGACATACCTCCTTCCCTT
CAAAAACAACCTGATATTCCAAATGCAAAACTATTCTGGATAGCTACCCAAGGAAAACTA
TGCCAAACTGTGTGTAACATGTTGAACAAAGAAATGCTCGAATCAAACAAGTGCTACATG
TTGGACTGTGACAATGAGATTTTTGTTTGGATGGGAAGAAATACCTCAATTACAGAACGG
AAAACTTCAATCTCAGCTGCAGAAGATTTCCTCAAATCTCAGGGCAGGTCAACAAGAAGC
CATTTAACTTCCCTAACCGAAGGATCAGAAACTGCCATATTTAGGTCATATTTTGATGTG
TGGCCTCAATTGGCTGAGCCCAGGCTGTATGAAGAAGGTCGAGGGAAAGTAGCAGCAATG
TTCAAGCAACAAGGCTATGACGTGAAGGAGCTTCCTGAAGAAGACTGTGATTCTCTTATA
GACTGCAGTGGCACTCTAAAAGTCTGGCGTGTAAATGATGATGAGTTGTTCCTTGTCCCT
GTTGCCGAACAAACAAAGCTTTTCAGTGGTGACTGCTATATTGTGCAATACAAATATCCT
GGCAATGGAAGAGACGAATATTTATTTTATGCATGGCTTGGTCGTGGGGCTGTAATGGAA
GACAGAGTTGATGCTATCTCCCGTATGAATACTATTGTCGATTCAATGAAGGGAGATTCA
GTTGTGGGTCAAGTTATTGAGGAAAAGGAGCCTATTGAATTTTTCTTAATTTTTCAAACA
TTAATTGTTTTCAAGGGAGGTCTGAGCACACGTTACAAAAGATTTATAGCAGAAAAAGGT
ATTGCAGACGAAACTTATGATGAAAAAAAGACAGCTCTTTTTCGAGTTCAGGGAACGAGT
CCAAATAACATGCAAGCCATCCAAGTTGATCAAGTTTCAAGTTCCCTGAATTCATCCTAT
TGTTTCATCTTACAAACCGAAACATCTATCTTCACTTGGGTTGGGAACCTCTCCTCAACT
AGAGATCATGATCTTCTTGACAGAATGCTGGATCTAATAAATCCAACATTGCAACCTATA
TCAGTGAGGGAAGGTAGCGAACCTGATGTTTTCTGGAAAGCGCTTGGTGGAAAGGCAGAG
CATCCAAGGGAAAGGGAGATTAAGGCATATGTAGAAGACCCACATTTGTTTACATGTACC
TTTACTGATGGTGATCTTAAGGTGAAGGAGATATTCAACTTCACACAGGATGATCTGACT
ACAGAAGACAAGTTAATACTAGATTGCAACAGAGAAATTTATGTTTGGTGTGGCTGCCAT
TCAAATGTTAGATCAAAGAAACAAGCTCTTGAGATTGGTCTGAAATTTCTTGAGATAGAC
ATTCTGGTTGAAGGACTTTCCCTGGAGACTCCTATATATGTTGTTACAGAAGGTCATGAA
CCAACATTCTTCACTCGTTTCTTTGAATGGGATTCCTCCAAGGCAAATATGCATGGTAGC
TCATTTGAGCGGAGGCTGGCTATTTTGAAGGGAACAGCACAAAAGATAGAAGTACCTTTG
AGAAATTCATGGAAAGCATGCTCCACAGAGAATACCCCAGATAGTTTGAGAAGCAGATCG
GTCAGTTCTAATGGGCTGCGAAGAAGTGCATCTTCTGCCTTCAGTGTTTCTGGCTCAAAT
TTGAAGTCCTCAGACAACCACCAAATTTCAAGTGTATCTCCAATTGCAAGATCATTGTTT
TCAGGATCTTATCCTGATCATGACAGTGCTGATGGGTCACCAGTACCCCCACGGCCTACA
GCAGTTGTGCCAAGCTCCCCTTCTGAGAATGTAGGCCTTGATCAGATTGATGGAGTTAAG
ATTGATGTTAACTTGCTAATCTTCCCATATGAGCGTTTAAAAGTTGTGGCTGATGACCCA
GTAACAACAGGCATAGATGTGACCAAAAGAGAGGCATATTTGTCAGAAGAGGAGTTCCAG
CAGATATTTGGGATGACAAAAACAGCCTTCTACAAACTTCCCAAATGGCGACAGAACAAG
CTAAAGAGGTCTGTTCATCTATTCTAGGGCGTGTGCCCTCCAGATTAAACCCATAGAGAC
TGGGATAAACAGATCTTCCTTCTTGAATGGTATAATGGGGCAATCTCAGAACCCAGATGC
AGTCTACTTTTTGATCCAACTTCTAAGCTTGGCTTGCTCTTTTTGTTGTTGAGCAAATCC
TTGATGAAGTCTTAATCTTAAATTGAGGAACACATGTTTTTGTTACTGTTCTTAATTAAC
CCTTCTTGATTATGAATCGAAAGGAACTTGAGTTTGGAGTCAAA