Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06440.t01
CDS Infomation

cds chromosome:12X:6:7171150:7175802:-1 gene:VIT_06s0004g06440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACCCTTTAACTCTTGTGAAACGGATTCAGAAGATTAATTCACAAGAAGCTGCCTTA
GGGATTTCGGAAAGCGCTTCATGGCACGCCAAGTACAAGGAATCGGCCTACGTGTTCGTT
GGCGGCATTCCGTTTGACCTTACGGAAGGTGATCTCCTCGCAGTTTTTTCCCAATATGGA
GAGATTGTTGATGTGAATCTTGTTAGAGACAAGGGGACGGGAAAATCCAAGGGTTTCGCC
TTTGTTGCATATGAGGATCAAAGAAGTACAAATCTTGCAGTAGATAATTTGAATGGTGCA
CAGATTCTTGGGCGAATTATAAGGGTTGATCATGTGAGCAACTATAAAAAGAAAGAAGAA
GAAGACGAAGAGACAGAGCGGCAGAAGAGGGAGGCTCGGGGCGTGTGCCGTGCTTTTCAG
AGAGGTGAATGTAATCGTGGAGCCGGGTGCAAGTTTTCGCATGATGAGCAAAGAGCTTCA
AACACTGGTTGGGGTTCAGAGGATAAAAGTTCCAGGTGGGGACATGACAAGTTTCAGGGT
TCAACAAAGAGTGATGGAAGACCTAACAGCATACCAACAAATCGTGTTCATGAGCCTACA
GTTGGAGAAGGGCATAGATTTGGCAATAAGGATGCAAGAAGTTCCCGAACAAAGGGCAGT
GAGGGGGGAAGAGAAAGCCATCATAGAAGAAGTGAATTGGATATAAGAGACCAAGATGGC
AGAGGTCTTGAGAGACAAATGGAACAGAAGGAGAAGGAATTGAATTACAAGGAAGACCAG
GATAGGCGAACTACTGAGAGGAGGTCTGGAAGGCCTGATTCAAATCCAGGTGAAGATCAT
GATAGGAGGGGGGAAGACCAGGATATTAGAGCTACTGAAAGAAGGTCCAGAAGGCATGAT
TCAAATCCAAGTGAAGATCATGATAGGAGGGGGGAAGACCAGGATATTAGAGCTACTGAA
AGAAGGTCCAGAAGGCATGATTTTGAGTCGAATCCGAGAGAAGATGATAGGAAGGAAGAA
GACCGGGATAGGCGAGCTACTGAGAGAAGGTCCAGAAGGTCTGAATTTGAGTCAAATCCA
AGAGAAGATCATGATAGGAGGGAGGAAAAGAGATCAAGAAGGCATGAGTTGGAATCAAAG
CCAAAAGAAGATCATGATAGAAGGGAGGAAAAGCAATCAAGAAGACACGAGTCAGAATCG
TATCTAAGAGAAGACCCCCGAGATGAGAGAGGGGACAAGCGGTCAGGCCATAGCAGAGAT
ACTGCTTCCCATCGTCATAGAGAGAGATGA

Peptide Sequence

PEP ID

VIT_06s0004g06440.t01
PEP Infomation

pep chromosome:12X:6:7171150:7175802:-1 gene:VIT_06s0004g06440 transcript:VIT_06s0004g06440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG
EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNYKKKEE
EDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQRASNTGWGSEDKSSRWGHDKFQG
STKSDGRPNSIPTNRVHEPTVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQDG
RGLERQMEQKEKELNYKEDQDRRTTERRSGRPDSNPGEDHDRRGEDQDIRATERRSRRHD
SNPSEDHDRRGEDQDIRATERRSRRHDFESNPREDDRKEEDRDRRATERRSRRSEFESNP
REDHDRREEKRSRRHELESKPKEDHDRREEKQSRRHESESYLREDPRDERGDKRSGHSRD
TASHRHRER

Transcript Sequence

Transcript ID

VIT_06s0004g06440.t01
Transcript Infomation

cdna chromosome:12X:6:7171150:7175802:-1 gene:VIT_06s0004g06440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTCTCAACACCTTCCAAAACCCTAATTTTCAAGTTTTGGATCGTAGCAATGAACCCTTT
AACTCTTGTGAAACGGATTCAGAAGATTAATTCACAAGAAGCTGCCTTAGGGATTTCGGA
AAGCGCTTCATGGCACGCCAAGTACAAGGAATCGGCCTACGTGTTCGTTGGCGGCATTCC
GTTTGACCTTACGGAAGGTGATCTCCTCGCAGTTTTTTCCCAATATGGAGAGATTGTTGA
TGTGAATCTTGTTAGAGACAAGGGGACGGGAAAATCCAAGGGTTTCGCCTTTGTTGCATA
TGAGGATCAAAGAAGTACAAATCTTGCAGTAGATAATTTGAATGGTGCACAGATTCTTGG
GCGAATTATAAGGGTTGATCATGTGAGCAACTATAAAAAGAAAGAAGAAGAAGACGAAGA
GACAGAGCGGCAGAAGAGGGAGGCTCGGGGCGTGTGCCGTGCTTTTCAGAGAGGTGAATG
TAATCGTGGAGCCGGGTGCAAGTTTTCGCATGATGAGCAAAGAGCTTCAAACACTGGTTG
GGGTTCAGAGGATAAAAGTTCCAGGTGGGGACATGACAAGTTTCAGGGTTCAACAAAGAG
TGATGGAAGACCTAACAGCATACCAACAAATCGTGTTCATGAGCCTACAGTTGGAGAAGG
GCATAGATTTGGCAATAAGGATGCAAGAAGTTCCCGAACAAAGGGCAGTGAGGGGGGAAG
AGAAAGCCATCATAGAAGAAGTGAATTGGATATAAGAGACCAAGATGGCAGAGGTCTTGA
GAGACAAATGGAACAGAAGGAGAAGGAATTGAATTACAAGGAAGACCAGGATAGGCGAAC
TACTGAGAGGAGGTCTGGAAGGCCTGATTCAAATCCAGGTGAAGATCATGATAGGAGGGG
GGAAGACCAGGATATTAGAGCTACTGAAAGAAGGTCCAGAAGGCATGATTCAAATCCAAG
TGAAGATCATGATAGGAGGGGGGAAGACCAGGATATTAGAGCTACTGAAAGAAGGTCCAG
AAGGCATGATTTTGAGTCGAATCCGAGAGAAGATGATAGGAAGGAAGAAGACCGGGATAG
GCGAGCTACTGAGAGAAGGTCCAGAAGGTCTGAATTTGAGTCAAATCCAAGAGAAGATCA
TGATAGGAGGGAGGAAAAGAGATCAAGAAGGCATGAGTTGGAATCAAAGCCAAAAGAAGA
TCATGATAGAAGGGAGGAAAAGCAATCAAGAAGACACGAGTCAGAATCGTATCTAAGAGA
AGACCCCCGAGATGAGAGAGGGGACAAGCGGTCAGGCCATAGCAGAGATACTGCTTCCCA
TCGTCATAGAGAGAGATGATCATCCGCATAAAACAGCCATAACATTCCTGAGAGAAACTC
ACATAGATAGGATCCTCTCTGGTCTTGGAAGCAGAAGCTGTTAGTTTGCTGGGAAGCACT
TGTGTGCACCATGATTATCTTCATCCTGTCGTGAAGCATGTGAACCTTTTTGGTTGCCCA
AGGCTCCTTATTTTGTTTGGAAATGATTAACCAGCAACCATGGTTCAGCTTCACTGACAT
TTACTACCTATAGAGGTGTGTCCTCATCACAATGTTTTGTGGATATTTTCATTATTAATT
GATGTACGCTTTAAGTGCAGTTCTGTATGAAAACTAAGTGAAAATATCAATTTTTCTTTT
ATCAA