Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06430.t01
CDS Infomation

cds chromosome:12X:6:7166957:7169717:-1 gene:VIT_06s0004g06430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGTTGTGTAAAATGAAGAATGGTGATCACCATCAGAAAGAAGCAGAAGAGATTGCT
GGTAAAAATGTGAGGCTCTTTTCCTATAATGCATTGAGATCAGCAACACGGAACTTCCAT
CCATCTAACCGAATAGGCAGAGGTGGCTTTGGAATTGTTTATAGGGGAGTTTTGAGGGAT
GGAACTCAAGTTGCTGTGAAGTCTCTCTCTGTTGAATCTAAGCAAGGAAAAAGGGAGTTC
TTAACTGAGATTGACATGATTTCAAATATACAACATCCATGCCTTGTTCGACTTATTGGT
TGTTGTGTTGGGGGTGGTAGTCGAATGCTGGTCTATGAATATCTGGAGAACAAAAGTCTT
TCAAGTGCTTTACTCAGTTCGAAGTCTAAACGAAGTGTTTTAGATTGGCCTAAGAGGGCT
GCAATCTGTACAAGCACCGCTCACGGCCTTGCATTTCTTCATGAGGAAGCCGAACCCCGA
ATTATTCACCGAGATATCAAGGCCAGTAATATACTTCTTGATGGGGACCTTAATCCTAGA
ATTGGGGATTTTGGGCTGGCCAAACTTTTTCCAGAAAATGTCACTCACATTAGTACTAGA
GTGGCAGGAACCATGGGATACATGGCACCGGAGTATGCATTGTCAGGAAGGTTAACAGAA
AAGGCTGATGTCTACAGTTTTGGTGTGCTCATGCTTGAAATTATTAGTGGTAGAAGTAGT
AGCAAGGCTGCATTTGGGGAGAATCTTCTGGTCCTAGTGGAATGGACATGGAAACTGAAG
GAAGACAACAGTCTGTTGGACATGGTTGATCCAGAACTGGTTGAGTACCCTGAGGATGAG
GTTTCATGTTTCATCAAGGTGGCACTGCTGTGCATCCAAGCGGTGTCTTGGCAGAGGCCC
ACCATGACGCAAGTTCTGCAAATGCTCTCCAAAGAGGTCAGCCCGGATTCAATGGCGCTA
ACACGGCCAGGCTACTACAAGCATTCAGATGGTGGGATTGGCCATTCATGGATGACTTCT
TCTGAGGTACCAAAAAGAAAGCAACTGATAAATCCCCTTGTCACTTCGACCCGTGTAAGC
AGCTGTTCTGTAAGCATTACACAGGTGCTGCCTAGGTGA

Peptide Sequence

PEP ID

VIT_06s0004g06430.t01
PEP Infomation

pep chromosome:12X:6:7166957:7169717:-1 gene:VIT_06s0004g06430 transcript:VIT_06s0004g06430.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKLCKMKNGDHHQKEAEEIAGKNVRLFSYNALRSATRNFHPSNRIGRGGFGIVYRGVLRD
GTQVAVKSLSVESKQGKREFLTEIDMISNIQHPCLVRLIGCCVGGGSRMLVYEYLENKSL
SSALLSSKSKRSVLDWPKRAAICTSTAHGLAFLHEEAEPRIIHRDIKASNILLDGDLNPR
IGDFGLAKLFPENVTHISTRVAGTMGYMAPEYALSGRLTEKADVYSFGVLMLEIISGRSS
SKAAFGENLLVLVEWTWKLKEDNSLLDMVDPELVEYPEDEVSCFIKVALLCIQAVSWQRP
TMTQVLQMLSKEVSPDSMALTRPGYYKHSDGGIGHSWMTSSEVPKRKQLINPLVTSTRVS
SCSVSITQVLPR

Transcript Sequence

Transcript ID

VIT_06s0004g06430.t01
Transcript Infomation

cdna chromosome:12X:6:7166957:7169717:-1 gene:VIT_06s0004g06430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTTTGCTTCTCGTGTTCAGTTTTCACACTTCTAATCGTGCATGTTCTCCTTTTCTTGCT
GATGTGATATCTTTTGTGGGCGTTTAGTCATCCTGCATCTTTACGACACTTCCTCACTGC
TCCATGTAAAAGGCGTTTGAAGGAAGAGATGTTTTGAGGGTTTGGGGGGTAGCTAGAGAG
CTGTAATCGGATAGCAATGAATTTTAGCTCCTTCAGTGTGATGAAGTTGTGTAAAATGAA
GAATGGTGATCACCATCAGAAAGAAGCAGAAGAGATTGCTGGTAAAAATGTGAGGCTCTT
TTCCTATAATGCATTGAGATCAGCAACACGGAACTTCCATCCATCTAACCGAATAGGCAG
AGGTGGCTTTGGAATTGTTTATAGGGGAGTTTTGAGGGATGGAACTCAAGTTGCTGTGAA
GTCTCTCTCTGTTGAATCTAAGCAAGGAAAAAGGGAGTTCTTAACTGAGATTGACATGAT
TTCAAATATACAACATCCATGCCTTGTTCGACTTATTGGTTGTTGTGTTGGGGGTGGTAG
TCGAATGCTGGTCTATGAATATCTGGAGAACAAAAGTCTTTCAAGTGCTTTACTCAGTTC
GAAGTCTAAACGAAGTGTTTTAGATTGGCCTAAGAGGGCTGCAATCTGTACAAGCACCGC
TCACGGCCTTGCATTTCTTCATGAGGAAGCCGAACCCCGAATTATTCACCGAGATATCAA
GGCCAGTAATATACTTCTTGATGGGGACCTTAATCCTAGAATTGGGGATTTTGGGCTGGC
CAAACTTTTTCCAGAAAATGTCACTCACATTAGTACTAGAGTGGCAGGAACCATGGGATA
CATGGCACCGGAGTATGCATTGTCAGGAAGGTTAACAGAAAAGGCTGATGTCTACAGTTT
TGGTGTGCTCATGCTTGAAATTATTAGTGGTAGAAGTAGTAGCAAGGCTGCATTTGGGGA
GAATCTTCTGGTCCTAGTGGAATGGACATGGAAACTGAAGGAAGACAACAGTCTGTTGGA
CATGGTTGATCCAGAACTGGTTGAGTACCCTGAGGATGAGGTTTCATGTTTCATCAAGGT
GGCACTGCTGTGCATCCAAGCGGTGTCTTGGCAGAGGCCCACCATGACGCAAGTTCTGCA
AATGCTCTCCAAAGAGGTCAGCCCGGATTCAATGGCGCTAACACGGCCAGGCTACTACAA
GCATTCAGATGGTGGGATTGGCCATTCATGGATGACTTCTTCTGAGGTACCAAAAAGAAA
GCAACTGATAAATCCCCTTGTCACTTCGACCCGTGTAAGCAGCTGTTCTGTAAGCATTAC
ACAGGTGCTGCCTAGGTGAAAGAATTTAAGACTAGTTCCCTGTGAACAGGATCTCATTCA
TTTGCCTCTTTCATTAACGATTATTTCTTTCGCTATTGGAAAGCTAGGTTGATCAAAAAG
AAAAAATGAGAAAAGGAAAAAAGTTTTGGCCATGTATAATCGTTTCTACTAGTTCTCATT
TTTGGCTTG