Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g06210.t01
CDS Infomation

cds chromosome:12X:6:7005633:7007477:1 gene:VIT_06s0004g06210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAACTCCGTCGATCGTATTCTTTGTTGTGGCTGCAGCGTCGGCATATGTCCTCTGG
TTCTATCTCCTGGCTCGGAAGCTGACCGGCCCAAAGATGTGGCCGGTGGTGGGTAGCCTT
CCGGCGCTGTTCATGAACCGGAGGAGAATCCACGACTGGATCTCTGGAAACCTGAGAGAA
ACTGGTGGGGCTGCCACGTACCAAACATGCACCCTTGCTCTTCCTTTCTTGGCTTACAAA
CAGGGGTTTTATACCGTCACTTGTCACCCCAAGAACATCGAGCATATTCTCAGGACTCGG
TTTGATAACTACCCCAAAGGACCAACATGGCAAACGGCTTTTCATGATCTGCTAGGGCAA
GGGATTTTCAACAGTGATGGAGACACGTGGCTGATTCAACGAAAAACTGCTGCTCTGGAG
TTCACCACCCGGACGCTTCGCCAAGCCATGTCTAGATGGGTGAACCGGACCATTAAGATG
CGCTTATGGCGCATTTTAGAGAAGGCCGCCTCCGAGAAGTCGTCGGTGGACATGCAGGAC
TTGCTCCTCCGTTTGACGTTCGATAATATATGCGGACTCACCTTCGGAAAAGATCCAGAA
ACGCTCTCCCCCGATTTTCCAGAAAATCCGTTCTCCATGGCATTTGACTCCGCCACTGAG
TCCACTCTGCAACGCTTGCTTTACCCCGGATTTCTATGGAGACTGAAGAAGTTTCTGAGA
ATTGGAGCGGAGAGGAGGCTCAAACAGAGCCTTAGAGTCGTTGAAAACTACATGGACGAC
GCCGTCGCCGCCCGCAAAGAAAGGCCATCAGATGACCTCCTATCTCGCTTCATGAAGAAG
AGAGATGTCGATGGCAACGTCTTCCCAACTTCCGTCCTCCAACGCATAGCTCTCAACTTC
GTCCTCGCCGGCCGCGACACCTCATCAGTCGCGCTGAGCTGGTTCTTCTGGCTCATCATG
AACAACCCACGAGTCGAAGAAAAGATCACCACCGAATTATCGACAGTTCTCAGAGAAACA
CGCGGCGACGACCAAACCAAGTGGCTCGAAGAGCCTCTGGTCTTCGACGAAGCTGATCGG
TTGATCTACCTGAAAGCGGCATTAGCCGAAACGCTGCGTTTATACCCATCCGTACCGGAG
GACTTCAAGTACGTAGTATCGGACGATATTTTACCTGACGGAACCTACGTGCCGGCAGGT
ACGACTGTGACGTACTCTATATATTCTGTTGGGAGGATGAAAACGATATGGGGTGAGGAC
TGCTTGGAGTTTAAGCCGGAGCGGTGGCTCTCAACCGGCGGCGACCGTTTCGAACCGCCC
AAGGATGGTTACAAGTTTGTGGCGTTCAACGCTGGACCGAGAACCTGTTTGGGGAAGGAC
TTGGCTTACCTGCAAATGAAGTCGGTGGCATCCGCCGTACTGTTACGCTACCGGCTGAGT
CCTGTTCCCGGCCACCGGGTGGAGCAGAAGATGTCTTTGACTCTCTTCATGAAGAATGGA
CTGCGCGTGTACTTGCATCCACGTGGGCTTGAACCTCCTGGGGCCGCCACGTCAGCGTAG

Peptide Sequence

PEP ID

VIT_06s0004g06210.t01
PEP Infomation

pep chromosome:12X:6:7005633:7007477:1 gene:VIT_06s0004g06210 transcript:VIT_06s0004g06210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

METPSIVFFVVAAASAYVLWFYLLARKLTGPKMWPVVGSLPALFMNRRRIHDWISGNLRE
TGGAATYQTCTLALPFLAYKQGFYTVTCHPKNIEHILRTRFDNYPKGPTWQTAFHDLLGQ
GIFNSDGDTWLIQRKTAALEFTTRTLRQAMSRWVNRTIKMRLWRILEKAASEKSSVDMQD
LLLRLTFDNICGLTFGKDPETLSPDFPENPFSMAFDSATESTLQRLLYPGFLWRLKKFLR
IGAERRLKQSLRVVENYMDDAVAARKERPSDDLLSRFMKKRDVDGNVFPTSVLQRIALNF
VLAGRDTSSVALSWFFWLIMNNPRVEEKITTELSTVLRETRGDDQTKWLEEPLVFDEADR
LIYLKAALAETLRLYPSVPEDFKYVVSDDILPDGTYVPAGTTVTYSIYSVGRMKTIWGED
CLEFKPERWLSTGGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLS
PVPGHRVEQKMSLTLFMKNGLRVYLHPRGLEPPGAATSA

Transcript Sequence

Transcript ID

VIT_06s0004g06210.t01
Transcript Infomation

cdna chromosome:12X:6:7005633:7007477:1 gene:VIT_06s0004g06210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCACAACAGTCTACTCCATTCACTGACTATCGATCCCACATGGAAACTCCGTCGATCGTA
TTCTTTGTTGTGGCTGCAGCGTCGGCATATGTCCTCTGGTTCTATCTCCTGGCTCGGAAG
CTGACCGGCCCAAAGATGTGGCCGGTGGTGGGTAGCCTTCCGGCGCTGTTCATGAACCGG
AGGAGAATCCACGACTGGATCTCTGGAAACCTGAGAGAAACTGGTGGGGCTGCCACGTAC
CAAACATGCACCCTTGCTCTTCCTTTCTTGGCTTACAAACAGGGGTTTTATACCGTCACT
TGTCACCCCAAGAACATCGAGCATATTCTCAGGACTCGGTTTGATAACTACCCCAAAGGA
CCAACATGGCAAACGGCTTTTCATGATCTGCTAGGGCAAGGGATTTTCAACAGTGATGGA
GACACGTGGCTGATTCAACGAAAAACTGCTGCTCTGGAGTTCACCACCCGGACGCTTCGC
CAAGCCATGTCTAGATGGGTGAACCGGACCATTAAGATGCGCTTATGGCGCATTTTAGAG
AAGGCCGCCTCCGAGAAGTCGTCGGTGGACATGCAGGACTTGCTCCTCCGTTTGACGTTC
GATAATATATGCGGACTCACCTTCGGAAAAGATCCAGAAACGCTCTCCCCCGATTTTCCA
GAAAATCCGTTCTCCATGGCATTTGACTCCGCCACTGAGTCCACTCTGCAACGCTTGCTT
TACCCCGGATTTCTATGGAGACTGAAGAAGTTTCTGAGAATTGGAGCGGAGAGGAGGCTC
AAACAGAGCCTTAGAGTCGTTGAAAACTACATGGACGACGCCGTCGCCGCCCGCAAAGAA
AGGCCATCAGATGACCTCCTATCTCGCTTCATGAAGAAGAGAGATGTCGATGGCAACGTC
TTCCCAACTTCCGTCCTCCAACGCATAGCTCTCAACTTCGTCCTCGCCGGCCGCGACACC
TCATCAGTCGCGCTGAGCTGGTTCTTCTGGCTCATCATGAACAACCCACGAGTCGAAGAA
AAGATCACCACCGAATTATCGACAGTTCTCAGAGAAACACGCGGCGACGACCAAACCAAG
TGGCTCGAAGAGCCTCTGGTCTTCGACGAAGCTGATCGGTTGATCTACCTGAAAGCGGCA
TTAGCCGAAACGCTGCGTTTATACCCATCCGTACCGGAGGACTTCAAGTACGTAGTATCG
GACGATATTTTACCTGACGGAACCTACGTGCCGGCAGGTACGACTGTGACGTACTCTATA
TATTCTGTTGGGAGGATGAAAACGATATGGGGTGAGGACTGCTTGGAGTTTAAGCCGGAG
CGGTGGCTCTCAACCGGCGGCGACCGTTTCGAACCGCCCAAGGATGGTTACAAGTTTGTG
GCGTTCAACGCTGGACCGAGAACCTGTTTGGGGAAGGACTTGGCTTACCTGCAAATGAAG
TCGGTGGCATCCGCCGTACTGTTACGCTACCGGCTGAGTCCTGTTCCCGGCCACCGGGTG
GAGCAGAAGATGTCTTTGACTCTCTTCATGAAGAATGGACTGCGCGTGTACTTGCATCCA
CGTGGGCTTGAACCTCCTGGGGCCGCCACGTCAGCGTAGGGACGACGGTTTCGGCATTTT
CGGCTGTGTATTGGTTTGGTCTTTGGACTCTACGAGGGTATAGTTGTCCATGTGCCAGTA
TTGGAAGGGTGTTTTAGTCATTTAATTTGTTCTTGTTTTATACACGTGTCATTTGGAAGA
GTGTTGTCTTTCTAATATATGTCCATACTCCATATCAAATAGCAATATTCGTATAGATAT
GGATTTTTATATGTTTGTTATCAATAAAGCATAATGTTATTTTCT