Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05950.t01
CDS Infomation

cds chromosome:12X:6:6679157:6681906:-1 gene:VIT_06s0004g05950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAACAAGGTCTCCAATTTCTCCGATCTGATTCAACGAGTTGCAGCTTCTTGTTTG
CTACATCCGCTCGCCGCTGGGCGCCACGATGCCGATGAAGCACCGGGGAATCGAGCGGCG
GAGCAGGAGGCATACGATGTGTTCGACTCCGAAGAAGAGGAGGAAGACGAAGAGCGGGAG
GGGCTTAGGGTTTGGGAGGAGAGCCAGGGGGAGGGGAGAGCGGAGAGAGTGATGGAGATG
GAGTTGCTGATGGGTGAGGTGTTCGAGACGGTGTCGGCGATGAAGAGGGCGTACGTTAGC
CTCCAGGAGGCGCATTGTCCTTGGGACTCGGACAAAATGAGGATGGCCGACGTGGCGGTG
GTGTCGGAGCTCAGGCGGCTCGGGGTGTTGAGGGAGAGGTTCAGGAGGAGGGTTGGGAGG
GGAGGACGAGGCAGCGGCGGTCGTGGTCCGGTGGCGGCGACACTGAGGGAGGTGGTGGCG
CCGTACGAGGCGGCGGTGGAGGAGCTGAAGAGGGCGGTGAAGGCCAGAGAAGTAGAGGTT
GAGAACTTGAAGGAGAAGCTCAAGAGCGCCACAAGCCTCAACAGCAGTGGCAAGAAAGGG
AGGTTTCAGTCAAAGAAGAAAGTCAGCTGTAGTCAAGGTCAAGTTGCAGCGTTGCCGGCA
CCGGACTTATTCGAAGGGACGATGGGTGTAGTAAAGGAGGCGTCGAAGTCCTTCACGGCA
TTGCTGCTCTCGCTCATGCGCTCAGCACACTGGGACATCGCAGCGGCAGTTAGATCCATA
GAAGCGGCCACGGCCGTGACCGGCGCTACCGCGGACACCGCCATTTCCGTAGTGGGATCT
CACCACGCGAAGTACGCTCTGGAGTCCTACGTGTGCCGAAAAATCTTCCAGGGCTTCGAC
CACGAAACGTTCTATATGGATGGCAGCCTCTCGTCGCTGCTCCACCCAGATCAGTACCGC
CGAGACTGCTTCGCCCAGTACCGCGACATGAAAGCCATGGACCCTGTGGAGCTTCTCGGA
ATCTTACCCACTTGCCACTTCGGAAAATTCTGCACCAAGAAGTACCTCGCCATCGTCCAC
CCAAAAATGGAGGAGTCGCTGTTCGGGGACCTGGAGCATCGCCGGCAAGTCTTGGCCGGA
AATCACCCCAGAAGTCATTTCTACAGCGAGTTTCTGGGTTTGGCCAAGGCGGTTTGGTTA
CTTCACTTGTTGGCATTTTCGCTAGATCCTCCCCCAGGTCATTTTGAAGCGAGTCGGGGA
GCTGACTTCCACCCTCAGTATATGGAAAGCGTCATCAGATTATCCGGTGGCCGGGTTCCG
GCGGATCAGATCGTTGGAATTCCGGTGAGTCCCGGGTTCAAGCTTGGAAACGGGTCAGTC
ATCAAAGCCAGAGTCTATCTTGTATCCAGGAGTTGA

Peptide Sequence

PEP ID

VIT_06s0004g05950.t01
PEP Infomation

pep chromosome:12X:6:6679157:6681906:-1 gene:VIT_06s0004g05950 transcript:VIT_06s0004g05950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MANKVSNFSDLIQRVAASCLLHPLAAGRHDADEAPGNRAAEQEAYDVFDSEEEEEDEERE
GLRVWEESQGEGRAERVMEMELLMGEVFETVSAMKRAYVSLQEAHCPWDSDKMRMADVAV
VSELRRLGVLRERFRRRVGRGGRGSGGRGPVAATLREVVAPYEAAVEELKRAVKAREVEV
ENLKEKLKSATSLNSSGKKGRFQSKKKVSCSQGQVAALPAPDLFEGTMGVVKEASKSFTA
LLLSLMRSAHWDIAAAVRSIEAATAVTGATADTAISVVGSHHAKYALESYVCRKIFQGFD
HETFYMDGSLSSLLHPDQYRRDCFAQYRDMKAMDPVELLGILPTCHFGKFCTKKYLAIVH
PKMEESLFGDLEHRRQVLAGNHPRSHFYSEFLGLAKAVWLLHLLAFSLDPPPGHFEASRG
ADFHPQYMESVIRLSGGRVPADQIVGIPVSPGFKLGNGSVIKARVYLVSRS

Transcript Sequence

Transcript ID

VIT_06s0004g05950.t01
Transcript Infomation

cdna chromosome:12X:6:6679157:6681906:-1 gene:VIT_06s0004g05950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGGCGGAGTCGGAGTCGGAGGATCTACATCTGCGGTACTTTGTGGCGTTCAACAGAGATT
CGGCGGAGAAGCAAACGCCGAGGTTCACATTGAGATCCGACAACTTCAACAGACACGAAG
GAGTCGATTCAAAGAGGAAGCGAGAAATGGCGAACAAGGTCTCCAATTTCTCCGATCTGA
TTCAACGAGTTGCAGCTTCTTGTTTGCTACATCCGCTCGCCGCTGGGCGCCACGATGCCG
ATGAAGCACCGGGGAATCGAGCGGCGGAGCAGGAGGCATACGATGTGTTCGACTCCGAAG
AAGAGGAGGAAGACGAAGAGCGGGAGGGGCTTAGGGTTTGGGAGGAGAGCCAGGGGGAGG
GGAGAGCGGAGAGAGTGATGGAGATGGAGTTGCTGATGGGTGAGGTGTTCGAGACGGTGT
CGGCGATGAAGAGGGCGTACGTTAGCCTCCAGGAGGCGCATTGTCCTTGGGACTCGGACA
AAATGAGGATGGCCGACGTGGCGGTGGTGTCGGAGCTCAGGCGGCTCGGGGTGTTGAGGG
AGAGGTTCAGGAGGAGGGTTGGGAGGGGAGGACGAGGCAGCGGCGGTCGTGGTCCGGTGG
CGGCGACACTGAGGGAGGTGGTGGCGCCGTACGAGGCGGCGGTGGAGGAGCTGAAGAGGG
CGGTGAAGGCCAGAGAAGTAGAGGTTGAGAACTTGAAGGAGAAGCTCAAGAGCGCCACAA
GCCTCAACAGCAGTGGCAAGAAAGGGAGGTTTCAGTCAAAGAAGAAAGTCAGCTGTAGTC
AAGGTCAAGTTGCAGCGTTGCCGGCACCGGACTTATTCGAAGGGACGATGGGTGTAGTAA
AGGAGGCGTCGAAGTCCTTCACGGCATTGCTGCTCTCGCTCATGCGCTCAGCACACTGGG
ACATCGCAGCGGCAGTTAGATCCATAGAAGCGGCCACGGCCGTGACCGGCGCTACCGCGG
ACACCGCCATTTCCGTAGTGGGATCTCACCACGCGAAGTACGCTCTGGAGTCCTACGTGT
GCCGAAAAATCTTCCAGGGCTTCGACCACGAAACGTTCTATATGGATGGCAGCCTCTCGT
CGCTGCTCCACCCAGATCAGTACCGCCGAGACTGCTTCGCCCAGTACCGCGACATGAAAG
CCATGGACCCTGTGGAGCTTCTCGGAATCTTACCCACTTGCCACTTCGGAAAATTCTGCA
CCAAGAAGTACCTCGCCATCGTCCACCCAAAAATGGAGGAGTCGCTGTTCGGGGACCTGG
AGCATCGCCGGCAAGTCTTGGCCGGAAATCACCCCAGAAGTCATTTCTACAGCGAGTTTC
TGGGTTTGGCCAAGGCGGTTTGGTTACTTCACTTGTTGGCATTTTCGCTAGATCCTCCCC
CAGGTCATTTTGAAGCGAGTCGGGGAGCTGACTTCCACCCTCAGTATATGGAAAGCGTCA
TCAGATTATCCGGTGGCCGGGTTCCGGCGGATCAGATCGTTGGAATTCCGGTGAGTCCCG
GGTTCAAGCTTGGAAACGGGTCAGTCATCAAAGCCAGAGTCTATCTTGTATCCAGGAGTT
GAATGGATGTGTGGACATTTGAACTTATTCCGGACTAGGTTCGACTAAATATTATGCTCG
TAGTTTGGATTTGGG