Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05920.t01
CDS Infomation

cds chromosome:12X:6:6664535:6666289:-1 gene:VIT_06s0004g05920 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proliferating cell nuclear antigen [Source:UniProtKB/TrEMBL;Acc:A5B6U5]
Sequence

ATGCTGGAGTTGAGGCTGGTTCAGGGGAGCCTTCTAAAGAAGGTTCTAGAGGCGATCAAG
GACCTGGTTAACGATGCCAACTTCGACTGCTCCGCCACCGGATTCTCTCTCCAGGCTATG
GATTCCAGCCACGTAGCCCTTGTTGCTCTGCTCCTCAGATCGGAGGGCTTCGAGCACTAC
CGCTGCGATCGGAACATCTCCATGGGAATGAATCTCAATAACATGTCCAAGATGCTGAAG
TGCGCCGGAAATGATGACATTATCACCATCAAGGCCGATGACGGCAGTGACACTGTCACC
TTCATGTTTGAAAGCCCTACCCAAGATAAGATTGCTGATTTTGAGATGAAACTGATGGAC
ATTGATAGCGAGCACCTTGGTATTCCCGAAGCAGAATACCATGCTATTGTAAGGATGCCT
TCATCTGAGTTTCAAAGGATTTGTAAAGATCTTAGCAGCATTGGTGACACAGTTGTCATC
TCTGTGACAAAAGAGGGTGTGAAGTTCTCAACACGAGGTGATATTGGAACTGCAAATATT
GTTTGCAGGCAGAATACTACCGTGGACAAGCCGGAGGAAGCAACAGTGATAGAGATGAAT
GAGCCGGTTTCATTAACATTTGCACTGAGATACATGAACTCCTTCACAAAAGCAACCCCA
TTATCAAACACTGTTACAATTAGCTTATCATCAGAGTTGCCTGTTGTGGTTGAGTACAAG
ATTGCAGAGATGGGTTATATCAGGTTCTACTTGGCACCCAAGATCGAAGAGGATGAGGAT
GAGACCAAGCCCCAAGCCTAA

Peptide Sequence

PEP ID

VIT_06s0004g05920.t01
PEP Infomation

pep chromosome:12X:6:6664535:6666289:-1 gene:VIT_06s0004g05920 transcript:VIT_06s0004g05920.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proliferating cell nuclear antigen [Source:UniProtKB/TrEMBL;Acc:A5B6U5]
Sequence

MLELRLVQGSLLKKVLEAIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY
RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD
IDSEHLGIPEAEYHAIVRMPSSEFQRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI
VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYK
IAEMGYIRFYLAPKIEEDEDETKPQA

Transcript Sequence

Transcript ID

VIT_06s0004g05920.t01
Transcript Infomation

cdna chromosome:12X:6:6664535:6666289:-1 gene:VIT_06s0004g05920 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proliferating cell nuclear antigen [Source:UniProtKB/TrEMBL;Acc:A5B6U5]
Sequence

AAGCAGAAGGAGAATAAGATGCTGGAGTTGAGGCTGGTTCAGGGGAGCCTTCTAAAGAAG
GTTCTAGAGGCGATCAAGGACCTGGTTAACGATGCCAACTTCGACTGCTCCGCCACCGGA
TTCTCTCTCCAGGCTATGGATTCCAGCCACGTAGCCCTTGTTGCTCTGCTCCTCAGATCG
GAGGGCTTCGAGCACTACCGCTGCGATCGGAACATCTCCATGGGAATGAATCTCAATAAC
ATGTCCAAGATGCTGAAGTGCGCCGGAAATGATGACATTATCACCATCAAGGCCGATGAC
GGCAGTGACACTGTCACCTTCATGTTTGAAAGCCCTACCCAAGATAAGATTGCTGATTTT
GAGATGAAACTGATGGACATTGATAGCGAGCACCTTGGTATTCCCGAAGCAGAATACCAT
GCTATTGTAAGGATGCCTTCATCTGAGTTTCAAAGGATTTGTAAAGATCTTAGCAGCATT
GGTGACACAGTTGTCATCTCTGTGACAAAAGAGGGTGTGAAGTTCTCAACACGAGGTGAT
ATTGGAACTGCAAATATTGTTTGCAGGCAGAATACTACCGTGGACAAGCCGGAGGAAGCA
ACAGTGATAGAGATGAATGAGCCGGTTTCATTAACATTTGCACTGAGATACATGAACTCC
TTCACAAAAGCAACCCCATTATCAAACACTGTTACAATTAGCTTATCATCAGAGTTGCCT
GTTGTGGTTGAGTACAAGATTGCAGAGATGGGTTATATCAGGTTCTACTTGGCACCCAAG
ATCGAAGAGGATGAGGATGAGACCAAGCCCCAAGCCTAATTCCTCAGCATTTCCAGCAAA
TTCTACATTCCTATTTCTATTCCTCTTTTCCTCAAGACGGACACTTCCCTAAACTTCATG
TTGAGAGGATGTTGCTTATAAATTTTCTGGGGATATTATCAATGTAGGCAAGTGTTATAT
TTGCTTTTAGAAAAAGTGATGTGGTGGTTAGTTTTTGTT