Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05900.t01
CDS Infomation

cds chromosome:12X:6:6648942:6656794:1 gene:VIT_06s0004g05900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAGTGCAAGATTATCTCGACAAGCACATGCTTTCTCGCAAAATCGAAGACGCCGTC
AATGCTGCTGTTAGGGCCAAGACTTCCGATCCCGTTCTCTTCATCTCGAATCATATGAAG
AAAGCGGTTTCATCCGTGATCACGAGGGTGAAGGCGAGGCAGATTCTTGATAGCAGGGGA
ATTCCTACTGTTGAAGTGGATTTGTACACCAATAAAGGAATGTTCCGTGCTTCAGTTCCT
AGTGGTACTCCTATTGGAATGTATGAAGCTGTTGAATTACGGGATGGGGACAAGGGAACA
TATCTTGGAAATGGTGTGACCAGAGCTGTTAGGAATGTCAATGAAAAAATATCTGAAGCT
TTGATTGGTATGGATCCTACACTTCAGTCCCAAATTGATCAAGTAATGATAGACCTGGAC
AAAACTGAAAAGAAGGGTGAACTTGGAGCAAATGCTATTTTAGCTGTATCAATTGCTGCT
TGCAAAGCTGGGGCTGCTGAAAAAGAGGTTCCACTTTACAAGCACATTGCTGATCTTTCC
GGCCAAAGCAACTTGTTTCTCCCTGTTCCTGCCTTCACAGTTATAAGTGGCGGAAAACAT
GCTGGGAATACTTTGGCTGCTCAGGAAATTATGATTCTCCCAATTGGAGCAACTAGATTC
GAGGAGGCATTGCAAATGGGCGCTGAGACCTATCATCACTTAAAGGCTGTTATTACAGAA
AAATATGGTGCCCATGGGTGTCATGTTGGTGAGGATGGTGGGCTTGCTCCAAACATCTCC
AGAGAAGGTTTGGATCTAGTAAAAGAAGCTATCGGCAGAACAGGATATAATGAGAAAATA
AAGATTGCAATCGATGTCGCTGCTACTGATTTCTGCATAGGTGCAAAGTATGATTTGGAC
TTCAAATCCCCAAACAAATCAGGGCAAAATTTTAAGTCGGGAGAGGATATGATTGAGATG
TACAAAGAACTTTGTAATGACTACCCAATTGTATCAATTGAAGATCCATTTGACAAAGAG
GACTGGGAACATATCAGGAATTTTTGTGGTCTTGGAATTTGCCAGGTTGTTGGCGATGAC
TTGTTGATGTCAAATCCTAAACGTATTGAGAGAGCAAGACGTGAATCCACTTGCAATGCT
CTTCTTCTCAAGGTGAATCAGGTTGGAACTGTGACCGAAGCCATTGAAGTGGTGAAGCTG
GCAAAGGATGCCCATTGGGGAGTGGTGACATCTCATAGATGTGGAGAAACAGAAGATTCT
TTTTTAGCCGATCTATCTGTTGGCCTTGCTACTGGTCAGATCAAAGCAGGTGCACCTTGC
AGAGGAGAGCGGCTTGCAAAGTACAACCAGTTGATTCGGATTGAAGAAGAGCTTGGGGAT
CAAGCGGTTTATGCTGGCGAAGATTGGAGACAGTCGTGA

Peptide Sequence

PEP ID

VIT_06s0004g05900.t01
PEP Infomation

pep chromosome:12X:6:6648942:6656794:1 gene:VIT_06s0004g05900 transcript:VIT_06s0004g05900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVQDYLDKHMLSRKIEDAVNAAVRAKTSDPVLFISNHMKKAVSSVITRVKARQILDSRG
IPTVEVDLYTNKGMFRASVPSGTPIGMYEAVELRDGDKGTYLGNGVTRAVRNVNEKISEA
LIGMDPTLQSQIDQVMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLS
GQSNLFLPVPAFTVISGGKHAGNTLAAQEIMILPIGATRFEEALQMGAETYHHLKAVITE
KYGAHGCHVGEDGGLAPNISREGLDLVKEAIGRTGYNEKIKIAIDVAATDFCIGAKYDLD
FKSPNKSGQNFKSGEDMIEMYKELCNDYPIVSIEDPFDKEDWEHIRNFCGLGICQVVGDD
LLMSNPKRIERARRESTCNALLLKVNQVGTVTEAIEVVKLAKDAHWGVVTSHRCGETEDS
FLADLSVGLATGQIKAGAPCRGERLAKYNQLIRIEEELGDQAVYAGEDWRQS

Transcript Sequence

Transcript ID

VIT_06s0004g05900.t01
Transcript Infomation

cdna chromosome:12X:6:6648942:6656794:1 gene:VIT_06s0004g05900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACAGTCATTTCACTTTTAAATTATGGTTTTACCCCTAAATTGGGTTTAGGGCATCAC
ACTTACCATTCCGAAGGTTTGAGTCTTAAGATGAAAATTTCAGCATATACTAGAAGTTTC
ATAAAATTTTACAATTTAAAAAGTCACTTAAGTGATTTTTGAACTATTCCAAACATCTCT
TTTTGGTAAAACATGGTCAAATAGCAATGTAACTTAAGAACAGTTTAAGGAGAACATTTA
ACTTCAAAAAAAAGAAAAAAGTCCAAACATGCCCAGTGTACAAAATATTTAAAACAGGGC
AAAAGCAGCCGCTCGCAACGACGTCGTTCCAATCCGGAAACAGGGCCTCTACTCTTTCGC
GAGCCTGAGCTACTGAGCACGAACCAGTACGAAGATTTGATTTTGGATTCAAAAGCCTCT
TCGGAAAATTTTCATTTTCCTGAGAGAGAGAAAAGAAGTAGCAAACACAGTGATCAGTAG
AAAATGTCAGTGCAAGATTATCTCGACAAGCACATGCTTTCTCGCAAAATCGAAGACGCC
GTCAATGCTGCTGTTAGGGCCAAGACTTCCGATCCCGTTCTCTTCATCTCGAATCATATG
AAGAAAGCGGTTTCATCCGTGATCACGAGGGTGAAGGCGAGGCAGATTCTTGATAGCAGG
GGAATTCCTACTGTTGAAGTGGATTTGTACACCAATAAAGGAATGTTCCGTGCTTCAGTT
CCTAGTGGTACTCCTATTGGAATGTATGAAGCTGTTGAATTACGGGATGGGGACAAGGGA
ACATATCTTGGAAATGGTGTGACCAGAGCTGTTAGGAATGTCAATGAAAAAATATCTGAA
GCTTTGATTGGTATGGATCCTACACTTCAGTCCCAAATTGATCAAGTAATGATAGACCTG
GACAAAACTGAAAAGAAGGGTGAACTTGGAGCAAATGCTATTTTAGCTGTATCAATTGCT
GCTTGCAAAGCTGGGGCTGCTGAAAAAGAGGTTCCACTTTACAAGCACATTGCTGATCTT
TCCGGCCAAAGCAACTTGTTTCTCCCTGTTCCTGCCTTCACAGTTATAAGTGGCGGAAAA
CATGCTGGGAATACTTTGGCTGCTCAGGAAATTATGATTCTCCCAATTGGAGCAACTAGA
TTCGAGGAGGCATTGCAAATGGGCGCTGAGACCTATCATCACTTAAAGGCTGTTATTACA
GAAAAATATGGTGCCCATGGGTGTCATGTTGGTGAGGATGGTGGGCTTGCTCCAAACATC
TCCAGAGAAGGTTTGGATCTAGTAAAAGAAGCTATCGGCAGAACAGGATATAATGAGAAA
ATAAAGATTGCAATCGATGTCGCTGCTACTGATTTCTGCATAGGTGCAAAGTATGATTTG
GACTTCAAATCCCCAAACAAATCAGGGCAAAATTTTAAGTCGGGAGAGGATATGATTGAG
ATGTACAAAGAACTTTGTAATGACTACCCAATTGTATCAATTGAAGATCCATTTGACAAA
GAGGACTGGGAACATATCAGGAATTTTTGTGGTCTTGGAATTTGCCAGGTTGTTGGCGAT
GACTTGTTGATGTCAAATCCTAAACGTATTGAGAGAGCAAGACGTGAATCCACTTGCAAT
GCTCTTCTTCTCAAGGTGAATCAGGTTGGAACTGTGACCGAAGCCATTGAAGTGGTGAAG
CTGGCAAAGGATGCCCATTGGGGAGTGGTGACATCTCATAGATGTGGAGAAACAGAAGAT
TCTTTTTTAGCCGATCTATCTGTTGGCCTTGCTACTGGTCAGATCAAAGCAGGTGCACCT
TGCAGAGGAGAGCGGCTTGCAAAGTACAACCAGTTGATTCGGATTGAAGAAGAGCTTGGG
GATCAAGCGGTTTATGCTGGCGAAGATTGGAGACAGTCGTGATCATTCTTTCCAGGTCTT
TATACCCACATTTTTTTCCCTTCTGGTTCCTTTTTGAATATGTGAAGCTATACTCAGCAA
CTAGGTCATTCCAGATTCCAATGCAAAGTTTTGCATCGCTTCCCTTTTTTTTCCTTTTTG
ATTTAATTAATGATTGTTTTCCTCTGGTAATAGAGAGACATGTCTGAGGTGTGTTGAACA
GAGTTGTCTGTTTTTATGATGGATGGGATTTGTAGTTTTTCTATATTGGCAATACTAGGA
ATTTGTAACCGAATTTCCAAACTTTCAATGGATGATCATTT