Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05610.t01
CDS Infomation

cds chromosome:12X:6:6420422:6423513:1 gene:VIT_06s0004g05610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTAATAATAGTGCAGGTTTACATAGTGTATTTAGGATCCCTTCCTAAAGGGGAATTT
TCACCTATGTCTGAACACCTTGGGGTTCTCGAAGATGTTCTTGAGGGCAGTTCTTCAACA
GATTCTTTGGTAAGAAGTTATAAGAGAAGTTTCAATGGATTTGCAGCAAGGCTCACTGAA
AAGGAACGAGAAAAATTGGCTAATAAGGAAGGCGTGGTGTCGGTTTTTCCGAGTAGAATT
TTAAAACTTCATACAACAAGATCTTGGGACTTCATGGGATTCTCCGAAACATCTAGGCAC
AAACCTGCTCTTGAGAGTGATGTTATAATTGGAGTCTTTGACACTGGAATTTGGCCTGAA
TCACCTAGCTTTAGTGATAAAGATTTTGGTCCACCTCCAAGAAAATGGAAAGGTGTTTGT
TCAGGTGGCAAAAATTTTACTTGCAACAAGAAGGTTATTGGAGCTCGAATCTACAATTCG
CTGAATGATAGTTTCGATGTTTCAGTGAGGGACATAGATGGTCATGGATCCCACACTGCC
TCAATAGCTGCTGGCAACAATGTAGAGCATGCGAGTTTTCATGGCTTAGCACAAGGAAAG
GCAAGAGGAGGGGTTCCCTCTGCAAGGCTTGCCATATACAAAGTCTGTGTTTTTCTAGGG
TGCGCAAGCGCGGACATTTTGGCTGCCTTTGATGATGCTATTGCAGATGGGGTTGACATC
ATTTCAATATCTCTTGGATTTGATTCTGCAGTTGCTTTGGAAGAGGATGCCATAGCAATT
GGTGCTTTTCATGCCATGGCCGGAGGTATATTAACTGTGCACTCTGCAGGAAATGAAGGT
CCTGAGGTATTTTCTACATTTAGCTCTGCACCATGGATGGTCAGTGTAGCAGCAAGCACG
ATTGATCGCAAAATTATTGACAGGGTGGTTCTTGGCAATGGAACAGAACTAACAGGTCGT
TCATTTAATTATTTCACGATGAATGGATCCATGTACCCTCTTATATACGGAAAAGTTACT
AGCCGTGCCAATGCCTGTAATAATTTCCTATCACAGTTGTGCGTGCCAGATTGTTTAAAT
AAGAGTGCAGTGGAAGGAAAAATTCTACTATGTGAAAGCGCTTATGGAGATGAGGGCGCT
CATTGGGCTGGTGCCGCCGGCTCAATCAAATTGGATGTAGGTGTTTCTTCTGTTGTCCCC
TTACCTACAATAGCTTTACGTGGTAAAGACTTGCGCCTCGTCCGATCCTATTATAATTCC
ACAAAAAAGGCTGAAGCAAAGATACTGAAGAGTGAGGCAATCAAAGATTCTTCTGCTCCT
GTAGTGGCTCCCTTTTCATCACGAGGGCCAAACGCAGCCATACTTGAGATTATGAAGCCA
GATATTACAGCCCCTGGAGTAGATATATTGGCAGCATTCTCCCCTATTCCTAAACTTGTA
GACGGCATATCTGTGGAATATAATATATTATCAGGAACCTCCATGGCTTGCCCCCATGTT
GCTGGAATTGCTGCTTATGTTAAAAGTTTCCACCCCGCCTGGTCTGCTTCAGCCATCCGA
TCTGCTCTTATGACTACTGCTCGGCCCATGAAAGTTTCTGCAAATCTACATGGTGTACTC
AGTTTTGGGTCTGGGCATGTCGATCCAGTTAAAGCTATAAGTCCTGGATTAGTGTATGAA
ACCACTAAGGACAACTACACACAGATGTTGTGCGACATGGGTTACAACACAACAATGGTG
AGACTCATTTCAGGAGACAACAGCAGTTGTCCAAAGGACAGCAAAGGTTCCCCAAAAGAT
CTCAACTATCCTTCAATGACAGTTTACGTTAAGCAGTTAAGGCCTTTTAAAGTAGAGTTT
CCAAGAACAGTTACAAATGTTGGCCGCTCCAACTCTACTTATAAAGCACAAGTCATTATC
AGAAAACATCCACGTATGAAGGTCGACGTGAATCCTCCCATGCTCTCTTTCAAGTTAATA
AAGGAGAAGAAATCTTTTGTGGTGACTGTTACTGGTCAAGGAATGACGATGGAGAGACCG
GTGGAGTCGGCGACACTGGTGTGGTCTGATGGCACTCATACTGTGAGGAGTCCCATTACG
GTCTACACTGACATGTTGATTGATTAA

Peptide Sequence

PEP ID

VIT_06s0004g05610.t01
PEP Infomation

pep chromosome:12X:6:6420422:6423513:1 gene:VIT_06s0004g05610 transcript:VIT_06s0004g05610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLIIVQVYIVYLGSLPKGEFSPMSEHLGVLEDVLEGSSSTDSLVRSYKRSFNGFAARLTE
KEREKLANKEGVVSVFPSRILKLHTTRSWDFMGFSETSRHKPALESDVIIGVFDTGIWPE
SPSFSDKDFGPPPRKWKGVCSGGKNFTCNKKVIGARIYNSLNDSFDVSVRDIDGHGSHTA
SIAAGNNVEHASFHGLAQGKARGGVPSARLAIYKVCVFLGCASADILAAFDDAIADGVDI
ISISLGFDSAVALEEDAIAIGAFHAMAGGILTVHSAGNEGPEVFSTFSSAPWMVSVAAST
IDRKIIDRVVLGNGTELTGRSFNYFTMNGSMYPLIYGKVTSRANACNNFLSQLCVPDCLN
KSAVEGKILLCESAYGDEGAHWAGAAGSIKLDVGVSSVVPLPTIALRGKDLRLVRSYYNS
TKKAEAKILKSEAIKDSSAPVVAPFSSRGPNAAILEIMKPDITAPGVDILAAFSPIPKLV
DGISVEYNILSGTSMACPHVAGIAAYVKSFHPAWSASAIRSALMTTARPMKVSANLHGVL
SFGSGHVDPVKAISPGLVYETTKDNYTQMLCDMGYNTTMVRLISGDNSSCPKDSKGSPKD
LNYPSMTVYVKQLRPFKVEFPRTVTNVGRSNSTYKAQVIIRKHPRMKVDVNPPMLSFKLI
KEKKSFVVTVTGQGMTMERPVESATLVWSDGTHTVRSPITVYTDMLID

Transcript Sequence

Transcript ID

VIT_06s0004g05610.t01
Transcript Infomation

cdna chromosome:12X:6:6420422:6423513:1 gene:VIT_06s0004g05610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTAATAATAGTGCAGGTTTACATAGTGTATTTAGGATCCCTTCCTAAAGGGGAATTT
TCACCTATGTCTGAACACCTTGGGGTTCTCGAAGATGTTCTTGAGGGCAGTTCTTCAACA
GATTCTTTGGTAAGAAGTTATAAGAGAAGTTTCAATGGATTTGCAGCAAGGCTCACTGAA
AAGGAACGAGAAAAATTGGCTAATAAGGAAGGCGTGGTGTCGGTTTTTCCGAGTAGAATT
TTAAAACTTCATACAACAAGATCTTGGGACTTCATGGGATTCTCCGAAACATCTAGGCAC
AAACCTGCTCTTGAGAGTGATGTTATAATTGGAGTCTTTGACACTGGAATTTGGCCTGAA
TCACCTAGCTTTAGTGATAAAGATTTTGGTCCACCTCCAAGAAAATGGAAAGGTGTTTGT
TCAGGTGGCAAAAATTTTACTTGCAACAAGAAGGTTATTGGAGCTCGAATCTACAATTCG
CTGAATGATAGTTTCGATGTTTCAGTGAGGGACATAGATGGTCATGGATCCCACACTGCC
TCAATAGCTGCTGGCAACAATGTAGAGCATGCGAGTTTTCATGGCTTAGCACAAGGAAAG
GCAAGAGGAGGGGTTCCCTCTGCAAGGCTTGCCATATACAAAGTCTGTGTTTTTCTAGGG
TGCGCAAGCGCGGACATTTTGGCTGCCTTTGATGATGCTATTGCAGATGGGGTTGACATC
ATTTCAATATCTCTTGGATTTGATTCTGCAGTTGCTTTGGAAGAGGATGCCATAGCAATT
GGTGCTTTTCATGCCATGGCCGGAGGTATATTAACTGTGCACTCTGCAGGAAATGAAGGT
CCTGAGGTATTTTCTACATTTAGCTCTGCACCATGGATGGTCAGTGTAGCAGCAAGCACG
ATTGATCGCAAAATTATTGACAGGGTGGTTCTTGGCAATGGAACAGAACTAACAGGTCGT
TCATTTAATTATTTCACGATGAATGGATCCATGTACCCTCTTATATACGGAAAAGTTACT
AGCCGTGCCAATGCCTGTAATAATTTCCTATCACAGTTGTGCGTGCCAGATTGTTTAAAT
AAGAGTGCAGTGGAAGGAAAAATTCTACTATGTGAAAGCGCTTATGGAGATGAGGGCGCT
CATTGGGCTGGTGCCGCCGGCTCAATCAAATTGGATGTAGGTGTTTCTTCTGTTGTCCCC
TTACCTACAATAGCTTTACGTGGTAAAGACTTGCGCCTCGTCCGATCCTATTATAATTCC
ACAAAAAAGGCTGAAGCAAAGATACTGAAGAGTGAGGCAATCAAAGATTCTTCTGCTCCT
GTAGTGGCTCCCTTTTCATCACGAGGGCCAAACGCAGCCATACTTGAGATTATGAAGCCA
GATATTACAGCCCCTGGAGTAGATATATTGGCAGCATTCTCCCCTATTCCTAAACTTGTA
GACGGCATATCTGTGGAATATAATATATTATCAGGAACCTCCATGGCTTGCCCCCATGTT
GCTGGAATTGCTGCTTATGTTAAAAGTTTCCACCCCGCCTGGTCTGCTTCAGCCATCCGA
TCTGCTCTTATGACTACTGCTCGGCCCATGAAAGTTTCTGCAAATCTACATGGTGTACTC
AGTTTTGGGTCTGGGCATGTCGATCCAGTTAAAGCTATAAGTCCTGGATTAGTGTATGAA
ACCACTAAGGACAACTACACACAGATGTTGTGCGACATGGGTTACAACACAACAATGGTG
AGACTCATTTCAGGAGACAACAGCAGTTGTCCAAAGGACAGCAAAGGTTCCCCAAAAGAT
CTCAACTATCCTTCAATGACAGTTTACGTTAAGCAGTTAAGGCCTTTTAAAGTAGAGTTT
CCAAGAACAGTTACAAATGTTGGCCGCTCCAACTCTACTTATAAAGCACAAGTCATTATC
AGAAAACATCCACGTATGAAGGTCGACGTGAATCCTCCCATGCTCTCTTTCAAGTTAATA
AAGGAGAAGAAATCTTTTGTGGTGACTGTTACTGGTCAAGGAATGACGATGGAGAGACCG
GTGGAGTCGGCGACACTGGTGTGGTCTGATGGCACTCATACTGTGAGGAGTCCCATTACG
GTCTACACTGACATGTTGATTGATTAA