Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05530.t01
CDS Infomation

cds chromosome:12X:6:6364020:6368120:-1 gene:VIT_06s0004g05530 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:D7SK76]
Sequence

ATGGCGCAAATGGAGAGTGGTGTTTTGGATGATATAATTGACAGGCTTATGGAGTTTCGG
CAGGGGAAGTCGGGGAAGCAGGTTCCGCTGATGGAGTCGGAGATCCGCCAGCTCTGTACT
GTTTCCAGAGAGATCTTTCTTCAGCAGCCTAATCTTCTTGAGCTGGAGGCACCAATTAAG
ATCTGCGGTGATATTCATGGGCAATACAGTGATCTTTTAAGGCTCTTTGACTATGGGGGA
TATCCTCCTGAAGCCAATTATTTATTTCTAGGGGACTATGTGGACCGTGGAAAACAGAGT
TTGGAAACAATATGCCTTCTGCTTGCTTATAAAATTAAATACCCAGAGAACTTCTTTCTC
TTAAGAGGAAATCATGAGTGTGCTTCTATTAACAGGATTTATGGATTCTATGATGAATGT
AAACGTCGGTTCAATGTTAGACTTTGGAAGACGTTCACAGATTGTTTTAATTGTCTCCCT
GTGGCTGCTCTGATAGATGACAAGATATTGTGCATGCATGGTGGTCTTTCCCCTGAGCTA
ACAAATTTGGATCAAATTAGAAAATTGTCCCGTCCAACTGATGTTCCAGACTCTGGTTTG
CTTTGTGATTTACTTTGGTCGGATCCTGGTAGAGATATCAAGGGTTGGGGAATGAATGAC
AGGGGAGTCTCTTTCACTTTCGGTCCAGATAAAGTTTCAGAATTCTTAAGCAAGCATGAT
ATGGACCTTATTTGTCGTGCCCACCAGGTTGTGGAAGATGGATATGAATTCTTTGCAGAC
AGACAGCTTGTTACAATATTTTCTGCTCCCAACTATTGTGGTGAATTTGATAATGCTGGT
GCAATGATGAGTGTTGATGAAAGCTTAATGTGCTCTTTTCAAATTCTTAAGCCAAAGTTT
ATGTGA

Peptide Sequence

PEP ID

VIT_06s0004g05530.t01
PEP Infomation

pep chromosome:12X:6:6364020:6368120:-1 gene:VIT_06s0004g05530 transcript:VIT_06s0004g05530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:D7SK76]
Sequence

MAQMESGVLDDIIDRLMEFRQGKSGKQVPLMESEIRQLCTVSREIFLQQPNLLELEAPIK
ICGDIHGQYSDLLRLFDYGGYPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
LRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDDKILCMHGGLSPEL
TNLDQIRKLSRPTDVPDSGLLCDLLWSDPGRDIKGWGMNDRGVSFTFGPDKVSEFLSKHD
MDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPKF
M

Transcript Sequence

Transcript ID

VIT_06s0004g05530.t01
Transcript Infomation

cdna chromosome:12X:6:6364020:6368120:-1 gene:VIT_06s0004g05530 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:D7SK76]
Sequence

ATGGCGCAAATGGAGAGTGGTGTTTTGGATGATATAATTGACAGGCTTATGGAGTTTCGG
CAGGGGAAGTCGGGGAAGCAGGTTCCGCTGATGGAGTCGGAGATCCGCCAGCTCTGTACT
GTTTCCAGAGAGATCTTTCTTCAGCAGCCTAATCTTCTTGAGCTGGAGGCACCAATTAAG
ATCTGCGGTGATATTCATGGGCAATACAGTGATCTTTTAAGGCTCTTTGACTATGGGGGA
TATCCTCCTGAAGCCAATTATTTATTTCTAGGGGACTATGTGGACCGTGGAAAACAGAGT
TTGGAAACAATATGCCTTCTGCTTGCTTATAAAATTAAATACCCAGAGAACTTCTTTCTC
TTAAGAGGAAATCATGAGTGTGCTTCTATTAACAGGATTTATGGATTCTATGATGAATGT
AAACGTCGGTTCAATGTTAGACTTTGGAAGACGTTCACAGATTGTTTTAATTGTCTCCCT
GTGGCTGCTCTGATAGATGACAAGATATTGTGCATGCATGGTGGTCTTTCCCCTGAGCTA
ACAAATTTGGATCAAATTAGAAAATTGTCCCGTCCAACTGATGTTCCAGACTCTGGTTTG
CTTTGTGATTTACTTTGGTCGGATCCTGGTAGAGATATCAAGGGTTGGGGAATGAATGAC
AGGGGAGTCTCTTTCACTTTCGGTCCAGATAAAGTTTCAGAATTCTTAAGCAAGCATGAT
ATGGACCTTATTTGTCGTGCCCACCAGGTTGTGGAAGATGGATATGAATTCTTTGCAGAC
AGACAGCTTGTTACAATATTTTCTGCTCCCAACTATTGTGGTGAATTTGATAATGCTGGT
GCAATGATGAGTGTTGATGAAAGCTTAATGTGCTCTTTTCAAATTCTTAAGCCAAAGTTT
ATGTGA