Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05500.t01
CDS Infomation

cds chromosome:12X:6:6342667:6344806:-1 gene:VIT_06s0004g05500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGGCTTTTCAGACTCCCCAAACCATCCAACAACCTCACCTTCCAAAACCCTTCCAC
AAACCTACTGCCATCTCTCCAAAACCTCAATGCTGCCTCGCATTACGTCCTTCCACCACC
ACCCGAAGCAACGGCGACAGCAATAACAACAACCCATTGATTCAATCTCTGTGTAAGCAA
GGGAATTTGAATCAAGCTCTTCAAGTCCTCTCTCAAGAGCCCAACCCCACCCAACACACC
TACGAGCTCTTAATCCTCTCTTGTACCCGCCAGAACTCTCTCCCCCAGGGAATAGACCTT
CACCGCCACCTAATCCATGATGGGTCTGATCAGGACCCCTTTTTGGCCACAAAACTCATC
AACATGTACTCTGAATTGGACTCCATCGACAATGCACGGAAGGTGTTTGATAAAACTCGT
AAAAGAACTATATATGTTTGGAATGCGCTCTTTAGAGCGCTTACATTGGCGGGTTATGGT
AGAGAGGTGTTAGACTTGTATAGGCGGATGAATCGGATTGGGGTTCCATCGGATAGGTTC
ACTTATACATATGTGCTTAAGGCCTGTGTTGCTTCTGAGGCATTTGTTTCACTTTTGCTG
AATGGAAGGGAAATTCATGGGCATATCTTGCGACATGGGTTCGAGGGGCATGTTCATATT
ATGACTACTTTGTTGGATATGTATGCGAGGTTTGGGTGTGTTTTGAATGCCAGTCGGGTG
TTTGACCAGATGCCGGTGAAAAATGTGGTTTCATGGAGTGCCATGATTGCATGCTATTCG
AAGAATGGGAAGCCCTTGGAAGCATTAGAGCTCTTTCGCAAAATGATGCTTGAGAACCAG
GATTTGTTGCCTAATTCTGTGACTATGGTCAGTGTGCTTCAAGCTTGTGCCGCTCTTGCT
GCTTTAGAGCAGGGTAAGTTGATGCACGGGTATATCCTTAGAAGGGGTCTTGATTCGATA
TTACCAGTTGTTAGTGCTCTTGTGACAGTGTATGCAAGATGTGGTAATCTTGAATTGGGG
CACCGAGTTTTTGAGAGGATGGAGAAGAGGGATGTTGTTTCATGGAATTCTTTGATATCA
AGTTATGGGATTCATGGATTTGGAAGAAAAGCAATTCAAATTTTCAAAGAAATGATTGAC
CAGGGACTCTCACCTAGCCCCATTTCATTTGTTAGTGTTTTGGGAGCTTGCAGTCACGCA
GGGCTTGTGGAGGAAGGGAAAGTCTTGTTTGAATCTATGGTTAGAGGACATAAGATTTTT
CCCAGTGTGGAGCATTATGCCTGTATGGTGGATCTTCTTGGCCGTGCCAATCGGTTAGAT
GAAGCTGCCAAGATCATAGATGATATGCGGATTGAACCAGGACCTAAAGTTTGGGGATCT
CTACTTGGGTCATGTAGAATTCATTGTAATGTTGAGCTTGCAGAGAGGGCAACTTCAAGG
CTTTTTGAGCTTGAGCCCACAAATGCTGGGAACTACGTGCTTCTGGCTGATATTTATGCG
GAAGCTAAGATGTGGAATGAGGTGAAAAGGGTGAAGATGCTTCTGGAAGCTAGAGGACTA
CAAAAGGTCCCTGGTCGCAGCTGTATTGAAATTAGGAGGAAGATATACTCATTCATGTCA
GTGGATGAGTTCAACCCACAGATCGAACAACTCCATGCTTTGTTGCTTAAGCTCTCAATG
GAGATGAAGGAGAAGGGCTATGTCCCGGATACCAAAGTCGTGCTCTATGATCTCGATCCA
GAGGAGAAGGAACGAATTGTGTTGGGCCATAGTGAAAAACTGGCACTTGCCTTTGGTCTC
ATCAACAGCAAAAAAGGTGAAACCATTAGGATTACCAAGAATTTGAGGCTGTGTGAAGAC
TGCCACTCTGTCACCAAGTTCATTTCAAAGTTTGCAAATAGAGAGATCCTAGTTCGAGAT
GTTAATCGTTTCCACCTTTTCCAAGACGGGGTCTGTTCATGTGGTGATTATTGGTAG

Peptide Sequence

PEP ID

VIT_06s0004g05500.t01
PEP Infomation

pep chromosome:12X:6:6342667:6344806:-1 gene:VIT_06s0004g05500 transcript:VIT_06s0004g05500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWAFQTPQTIQQPHLPKPFHKPTAISPKPQCCLALRPSTTTRSNGDSNNNNPLIQSLCKQ
GNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLI
NMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRF
TYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRV
FDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALA
ALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLIS
SYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIF
PSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSR
LFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMS
VDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGL
INSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW

Transcript Sequence

Transcript ID

VIT_06s0004g05500.t01
Transcript Infomation

cdna chromosome:12X:6:6342667:6344806:-1 gene:VIT_06s0004g05500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGGCTTTTCAGACTCCCCAAACCATCCAACAACCTCACCTTCCAAAACCCTTCCAC
AAACCTACTGCCATCTCTCCAAAACCTCAATGCTGCCTCGCATTACGTCCTTCCACCACC
ACCCGAAGCAACGGCGACAGCAATAACAACAACCCATTGATTCAATCTCTGTGTAAGCAA
GGGAATTTGAATCAAGCTCTTCAAGTCCTCTCTCAAGAGCCCAACCCCACCCAACACACC
TACGAGCTCTTAATCCTCTCTTGTACCCGCCAGAACTCTCTCCCCCAGGGAATAGACCTT
CACCGCCACCTAATCCATGATGGGTCTGATCAGGACCCCTTTTTGGCCACAAAACTCATC
AACATGTACTCTGAATTGGACTCCATCGACAATGCACGGAAGGTGTTTGATAAAACTCGT
AAAAGAACTATATATGTTTGGAATGCGCTCTTTAGAGCGCTTACATTGGCGGGTTATGGT
AGAGAGGTGTTAGACTTGTATAGGCGGATGAATCGGATTGGGGTTCCATCGGATAGGTTC
ACTTATACATATGTGCTTAAGGCCTGTGTTGCTTCTGAGGCATTTGTTTCACTTTTGCTG
AATGGAAGGGAAATTCATGGGCATATCTTGCGACATGGGTTCGAGGGGCATGTTCATATT
ATGACTACTTTGTTGGATATGTATGCGAGGTTTGGGTGTGTTTTGAATGCCAGTCGGGTG
TTTGACCAGATGCCGGTGAAAAATGTGGTTTCATGGAGTGCCATGATTGCATGCTATTCG
AAGAATGGGAAGCCCTTGGAAGCATTAGAGCTCTTTCGCAAAATGATGCTTGAGAACCAG
GATTTGTTGCCTAATTCTGTGACTATGGTCAGTGTGCTTCAAGCTTGTGCCGCTCTTGCT
GCTTTAGAGCAGGGTAAGTTGATGCACGGGTATATCCTTAGAAGGGGTCTTGATTCGATA
TTACCAGTTGTTAGTGCTCTTGTGACAGTGTATGCAAGATGTGGTAATCTTGAATTGGGG
CACCGAGTTTTTGAGAGGATGGAGAAGAGGGATGTTGTTTCATGGAATTCTTTGATATCA
AGTTATGGGATTCATGGATTTGGAAGAAAAGCAATTCAAATTTTCAAAGAAATGATTGAC
CAGGGACTCTCACCTAGCCCCATTTCATTTGTTAGTGTTTTGGGAGCTTGCAGTCACGCA
GGGCTTGTGGAGGAAGGGAAAGTCTTGTTTGAATCTATGGTTAGAGGACATAAGATTTTT
CCCAGTGTGGAGCATTATGCCTGTATGGTGGATCTTCTTGGCCGTGCCAATCGGTTAGAT
GAAGCTGCCAAGATCATAGATGATATGCGGATTGAACCAGGACCTAAAGTTTGGGGATCT
CTACTTGGGTCATGTAGAATTCATTGTAATGTTGAGCTTGCAGAGAGGGCAACTTCAAGG
CTTTTTGAGCTTGAGCCCACAAATGCTGGGAACTACGTGCTTCTGGCTGATATTTATGCG
GAAGCTAAGATGTGGAATGAGGTGAAAAGGGTGAAGATGCTTCTGGAAGCTAGAGGACTA
CAAAAGGTCCCTGGTCGCAGCTGTATTGAAATTAGGAGGAAGATATACTCATTCATGTCA
GTGGATGAGTTCAACCCACAGATCGAACAACTCCATGCTTTGTTGCTTAAGCTCTCAATG
GAGATGAAGGAGAAGGGCTATGTCCCGGATACCAAAGTCGTGCTCTATGATCTCGATCCA
GAGGAGAAGGAACGAATTGTGTTGGGCCATAGTGAAAAACTGGCACTTGCCTTTGGTCTC
ATCAACAGCAAAAAAGGTGAAACCATTAGGATTACCAAGAATTTGAGGCTGTGTGAAGAC
TGCCACTCTGTCACCAAGTTCATTTCAAAGTTTGCAAATAGAGAGATCCTAGTTCGAGAT
GTTAATCGTTTCCACCTTTTCCAAGACGGGGTCTGTTCATGTGGTGATTATTGGTAGTCA
TGCATGCAACATCCGATCCTGATTCTTTTAGCTCATAATAATGGCCTCTCTTAGGAAGCT
TCGAGCGATTTTGGAGATGTACAGCTTCCAACACTTGAGTTCAGTTACAGAAAACAATTT
TACCCTACCATTATTGTTTACAGATGAGATGACGCTGCAG