Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05490.t01
CDS Infomation

cds chromosome:12X:6:6337057:6342373:1 gene:VIT_06s0004g05490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAATCTCATCACGCAACCCTAGGTCGACGGACCTTGGAGGAAATTCGGCAAAAGAGA
GCAGCAGAAAGATTAGTCAAAGCAGCCTCTGGCCCAGATCTAAGCCAAGTTTTAAACCCT
AACGATAATATGGGGATTAAGCAATCAGACAGCAGCAATCGACTCTCCGAGAATGATGTC
AGTGATTTGGTATCACAGCTAAAAGGCCTGCACAAGAGGAATGCAGAATTGGAAGAGGAC
AATAAGAAATTAAATTCGAGGCTTCAGGCAAAGGAGGTTGAGAACGATGTGCTTCAGAAG
CGTCTGAATGATCTGGAACAAAACAGTATACCATCTTTGAGAAAAGCTCTCAAGGATGTT
GCCATAGAAAAAGATGCAGCAGTTGTTGCACGGGAGGATCTGTCAGCCCAACTTCGCACA
GTGAAGAGACGGTTAAAGGAAGCAGAAGAAGAGCAATATAGAGCCGAGGAAGATGCAGCA
GCCTTAAGGGCAGAATTAAACTCAATTCAGCAACAAGCAATGATGGGCACACTAGGCAGC
ATTACCTCAATGGGAAATTCACCAGATCATATACAAGCTTTGGAAAGGGAGTTAGCTAGT
TTAAAATCTCAGTTACAGCAAGAATCCCTATTGAGGCATCAGGAGCAACAACGATTGGCA
GAGGAACAAGCTCAGAATTCTACGCTCATGTCTGAAAAGCAGGGTTTAGAAGAGAAAATT
GCAGCTATAACGAAAAAGACTTCAGATGCAGCATCTGAAAAAGCAGCTTGGGAGACATTT
TCATTGGAAGATAAGGAGAAATTGGAGAAGCAGTTGCATGATATGGCTGTAGCGGTTGAG
AGATTGGAAAGTAGTAGACAAAAACTCCTTATGGAGATTGATTCTCAGTCTTCAGTGATA
GAGAGTCTTTTTGAGGAAAATTCCAATCTTTCATCTTCTTATCAAGATGCAATGGGTGTA
GTCGTGCACTGGGAGAATCAGGTGAAAGACTGTCTAAAGCAAAATGAAGAGCTCCGAGGG
ATGTTAAATAAGTTGAGAGCTGAACAGACTAGTTTATTGCCTAATAATGAGATTCCATTC
AGCTTATCAGAAGGCAATAAAGATGGGGGAAACAACACTGGTCCCCAGGCATATACAACT
GAAATTCTCTTCCTCAAGGGTCAACTTGCAAAAGAACAGAGCAGAGTAGAGGCACTATCA
GCAGAGGTGATGCAGCTTGGTGCACAGCTTCAACAAGCTACACACGCATACAATGGTCTA
GCACGCCTCTATAAACCAGTGCTCCAGAACATCGAGAGGAGTCTCATCAAGATGAAGCAA
GATGGCCCAGTTACCGTGCAGTGA

Peptide Sequence

PEP ID

VIT_06s0004g05490.t01
PEP Infomation

pep chromosome:12X:6:6337057:6342373:1 gene:VIT_06s0004g05490 transcript:VIT_06s0004g05490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESHHATLGRRTLEEIRQKRAAERLVKAASGPDLSQVLNPNDNMGIKQSDSSNRLSENDV
SDLVSQLKGLHKRNAELEEDNKKLNSRLQAKEVENDVLQKRLNDLEQNSIPSLRKALKDV
AIEKDAAVVAREDLSAQLRTVKRRLKEAEEEQYRAEEDAAALRAELNSIQQQAMMGTLGS
ITSMGNSPDHIQALERELASLKSQLQQESLLRHQEQQRLAEEQAQNSTLMSEKQGLEEKI
AAITKKTSDAASEKAAWETFSLEDKEKLEKQLHDMAVAVERLESSRQKLLMEIDSQSSVI
ESLFEENSNLSSSYQDAMGVVVHWENQVKDCLKQNEELRGMLNKLRAEQTSLLPNNEIPF
SLSEGNKDGGNNTGPQAYTTEILFLKGQLAKEQSRVEALSAEVMQLGAQLQQATHAYNGL
ARLYKPVLQNIERSLIKMKQDGPVTVQ

Transcript Sequence

Transcript ID

VIT_06s0004g05490.t01
Transcript Infomation

cdna chromosome:12X:6:6337057:6342373:1 gene:VIT_06s0004g05490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAATTCAGGGGCCGATCTCTCTCTCTCTTCCTCGGAGAGCTTCGGATCGGCGATTTGC
CCAGCGGGGAAACCATCCACTCCGTCGTGTCTTATCCCTGCCATGGAATCTCATCACGCA
ACCCTAGGTCGACGGACCTTGGAGGAAATTCGGCAAAAGAGAGCAGCAGAAAGATTAGTC
AAAGCAGCCTCTGGCCCAGATCTAAGCCAAGTTTTAAACCCTAACGATAATATGGGGATT
AAGCAATCAGACAGCAGCAATCGACTCTCCGAGAATGATGTCAGTGATTTGGTATCACAG
CTAAAAGGCCTGCACAAGAGGAATGCAGAATTGGAAGAGGACAATAAGAAATTAAATTCG
AGGCTTCAGGCAAAGGAGGTTGAGAACGATGTGCTTCAGAAGCGTCTGAATGATCTGGAA
CAAAACAGTATACCATCTTTGAGAAAAGCTCTCAAGGATGTTGCCATAGAAAAAGATGCA
GCAGTTGTTGCACGGGAGGATCTGTCAGCCCAACTTCGCACAGTGAAGAGACGGTTAAAG
GAAGCAGAAGAAGAGCAATATAGAGCCGAGGAAGATGCAGCAGCCTTAAGGGCAGAATTA
AACTCAATTCAGCAACAAGCAATGATGGGCACACTAGGCAGCATTACCTCAATGGGAAAT
TCACCAGATCATATACAAGCTTTGGAAAGGGAGTTAGCTAGTTTAAAATCTCAGTTACAG
CAAGAATCCCTATTGAGGCATCAGGAGCAACAACGATTGGCAGAGGAACAAGCTCAGAAT
TCTACGCTCATGTCTGAAAAGCAGGGTTTAGAAGAGAAAATTGCAGCTATAACGAAAAAG
ACTTCAGATGCAGCATCTGAAAAAGCAGCTTGGGAGACATTTTCATTGGAAGATAAGGAG
AAATTGGAGAAGCAGTTGCATGATATGGCTGTAGCGGTTGAGAGATTGGAAAGTAGTAGA
CAAAAACTCCTTATGGAGATTGATTCTCAGTCTTCAGTGATAGAGAGTCTTTTTGAGGAA
AATTCCAATCTTTCATCTTCTTATCAAGATGCAATGGGTGTAGTCGTGCACTGGGAGAAT
CAGGTGAAAGACTGTCTAAAGCAAAATGAAGAGCTCCGAGGGATGTTAAATAAGTTGAGA
GCTGAACAGACTAGTTTATTGCCTAATAATGAGATTCCATTCAGCTTATCAGAAGGCAAT
AAAGATGGGGGAAACAACACTGGTCCCCAGGCATATACAACTGAAATTCTCTTCCTCAAG
GGTCAACTTGCAAAAGAACAGAGCAGAGTAGAGGCACTATCAGCAGAGGTGATGCAGCTT
GGTGCACAGCTTCAACAAGCTACACACGCATACAATGGTCTAGCACGCCTCTATAAACCA
GTGCTCCAGAACATCGAGAGGAGTCTCATCAAGATGAAGCAAGATGGCCCAGTTACCGTG
CAGTGAACATCAAAGAACTGTTCTTGGGGATCTTTCCTACAACATTTGTGATACTCTCAT
ACAACATTTGTGACACCCTCATGCGTAAAGGGTCTTGGATATGGGCCAGGCATCAGCATA
GGAAAACAATTGGTTAGCTTTTATAGTAGGTGGTATAAATCAGGGGTTGAATCCCTATAC
ACCTTCATGCCATCATTTTTTCTCCTGATCTATGATTCATACCCCTCTGCACATTTTGTT
AGTATATGTCTTTCCCATTTGTAAGTGGATGCTGCCGTCTTATCAACGGTATTGAAATCA
TTTGGATGAAATATCTGGATAAATATTAATCTCTTAATTTTTGCT