Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05480.t01
CDS Infomation

cds chromosome:12X:6:6333047:6335799:-1 gene:VIT_06s0004g05480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit G [Source:UniProtKB/TrEMBL;Acc:F6GUX9]
Sequence

ATGGCAATAGACAACAAACCAGGTTGGGGTTCCACCCAATCCAAACTCCGGTGGGGCGAG
CTCGAAGAAGACGATGGGGAGGATCTCGATTTCCTCCTGCCTCCTCGTCAGGTAATCGGA
CCCGACGACAACGGCATCAAGAAGGTGATCGAGTACAAGTTCAACGACGATGGCAACAAG
GTCAAGATCACCACCACCACTCGCATTCGCAAACTCGCCAAGGCCAGGCTCAGTAAGCGA
GCCATCGAGCGCCGATCCTGGGCCAAGTTTGGCGATGCCGTGCACGAGGATGTTGGCAGT
CGTCTCACCATGGTCTCCACCGAAGAAATCCTTCTCGAACGTCCTAGGGCTCCGGGTAGC
AAAGCGGAAGAATCAAAGGTTGCAGGAGACTCCTTGGCTCAACTTGGGAAAGGAGGTGCT
GTTCTCATGGTGTGCAGGACCTGTGGTAAGAAGGGTGACCATTGGACTTCAAGGTGCCCA
TACAAGGATCTTGCCCCACCTTCTGAAGGATTCATTGATAAGCCTGCTGCATCAGAAGGC
ACAGCCACTGCTTCTGGTCCTAGCAAGGGGACATATGTTCCCCCAGGCATGAGAGCAGGT
GCAGAGAGAACTGGAACTGAAATGAGACGCAGGAATGAAGAGAACTCTGTTCGGGTCACC
AACCTATCAGAGGACACCCGGGAGCCTGACTTGCATGAGCTCTTCAGGACATTTGGCCCT
GTAAGTCGTGTGTATGTTGCTGTTGATCAGAAGACTGGCATGAGCAGAGGTTTTGGATTT
GTTAACTTTGTGAACAAGGAAGATGCTGAGAGAGCTATCAACAAACTCAATGGATATGGT
TATGACAATCTCATCCTACGAGTTGAATGGGCCACGCCAAGGTCAAACTAA

Peptide Sequence

PEP ID

VIT_06s0004g05480.t01
PEP Infomation

pep chromosome:12X:6:6333047:6335799:-1 gene:VIT_06s0004g05480 transcript:VIT_06s0004g05480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit G [Source:UniProtKB/TrEMBL;Acc:F6GUX9]
Sequence

MAIDNKPGWGSTQSKLRWGELEEDDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFNDDGNK
VKITTTTRIRKLAKARLSKRAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGS
KAEESKVAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEG
TATASGPSKGTYVPPGMRAGAERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGP
VSRVYVAVDQKTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPRSN

Transcript Sequence

Transcript ID

VIT_06s0004g05480.t01
Transcript Infomation

cdna chromosome:12X:6:6333047:6335799:-1 gene:VIT_06s0004g05480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit G [Source:UniProtKB/TrEMBL;Acc:F6GUX9]
Sequence

GTTTTTCACTTTCTCTCCCAAGCAGCCATGGCAATAGACAACAAACCAGGTTGGGGTTCC
ACCCAATCCAAACTCCGGTGGGGCGAGCTCGAAGAAGACGATGGGGAGGATCTCGATTTC
CTCCTGCCTCCTCGTCAGGTAATCGGACCCGACGACAACGGCATCAAGAAGGTGATCGAG
TACAAGTTCAACGACGATGGCAACAAGGTCAAGATCACCACCACCACTCGCATTCGCAAA
CTCGCCAAGGCCAGGCTCAGTAAGCGAGCCATCGAGCGCCGATCCTGGGCCAAGTTTGGC
GATGCCGTGCACGAGGATGTTGGCAGTCGTCTCACCATGGTCTCCACCGAAGAAATCCTT
CTCGAACGTCCTAGGGCTCCGGGTAGCAAAGCGGAAGAATCAAAGGTTGCAGGAGACTCC
TTGGCTCAACTTGGGAAAGGAGGTGCTGTTCTCATGGTGTGCAGGACCTGTGGTAAGAAG
GGTGACCATTGGACTTCAAGGTGCCCATACAAGGATCTTGCCCCACCTTCTGAAGGATTC
ATTGATAAGCCTGCTGCATCAGAAGGCACAGCCACTGCTTCTGGTCCTAGCAAGGGGACA
TATGTTCCCCCAGGCATGAGAGCAGGTGCAGAGAGAACTGGAACTGAAATGAGACGCAGG
AATGAAGAGAACTCTGTTCGGGTCACCAACCTATCAGAGGACACCCGGGAGCCTGACTTG
CATGAGCTCTTCAGGACATTTGGCCCTGTAAGTCGTGTGTATGTTGCTGTTGATCAGAAG
ACTGGCATGAGCAGAGGTTTTGGATTTGTTAACTTTGTGAACAAGGAAGATGCTGAGAGA
GCTATCAACAAACTCAATGGATATGGTTATGACAATCTCATCCTACGAGTTGAATGGGCC
ACGCCAAGGTCAAACTAAACTATGTTTTTTCATAAGCTTATATAGATGTTTGATTATTTT
TACAATGAAAAGTTTGCTTGATCCTGGGTGCTTTT