Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05270.t01
CDS Infomation

cds chromosome:12X:6:6160463:6161468:-1 gene:VIT_06s0004g05270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCAAGCACGGTATTGGATGTGGAATAAAGGCAAAGGCCGTTGGAAATCTCATTTG
GATGCATCATCCAATTCATGGGAAGAGGAAGCTTTTGCCAAGGATGCATCCCAGCCTTTT
GGTGCTTTTATATGGCCTCCAAGATCTTATTCTTGCAGTTTCTGCAGAAGAGAATTCAGG
ACAGCTCAAGCCTTGGGGGGTCACATGAATGTCCACAGACGGGATAGAGCAAGGCTTAAG
CTGCAGCCTCCTAGTCCCCATAAAGAGATATCCGGTAAATCGATGGGTGATGAAGATCCA
GATCAAATTTGCACCTTGGTTTGCAATCCTAACCCTAATTCAATCCATGGAGTTGTTGCA
TCACCGCTCTCACCTTCAAGGGTTTCAGTGCTATCCATTCAAGAGAACTGTGAAGAGCTG
TCCATGATTTCTTCCACTGTTCAAGAACATCATAAAGGTACCTTTTCCTGCTTCCCTCAA
TCTTGGTCTAATTCTGTTCCCATTAGGGTTTTCAGCATCCCTGATTCTAAGAGAAGAGAG
GAAAACCCAATGAAGAAGCGAAAATCAAGAGTCCATGATGAGGCTAATTCCAGCAAATCT
GACCTATCCATGAGCTTGAATTTGGTTATTGGTCCTGGCAATGAGCAGACTGTTAGCTGC
AAGAGAAGAAGAACCGATCAAATACCGCTACCTTTCTTCCTTAAAGGAAGTTCAGCTACT
AGGCATGATCTCAAATCGCAAATCACTGCACTTAACCTGGACAGTGCAGAGGGTTTAGAC
CTTGAGCTCCGGCTTGGTGACCCACCAAAGGTGAAGTAG

Peptide Sequence

PEP ID

VIT_06s0004g05270.t01
PEP Infomation

pep chromosome:12X:6:6160463:6161468:-1 gene:VIT_06s0004g05270 transcript:VIT_06s0004g05270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEQARYWMWNKGKGRWKSHLDASSNSWEEEAFAKDASQPFGAFIWPPRSYSCSFCRREFR
TAQALGGHMNVHRRDRARLKLQPPSPHKEISGKSMGDEDPDQICTLVCNPNPNSIHGVVA
SPLSPSRVSVLSIQENCEELSMISSTVQEHHKGTFSCFPQSWSNSVPIRVFSIPDSKRRE
ENPMKKRKSRVHDEANSSKSDLSMSLNLVIGPGNEQTVSCKRRRTDQIPLPFFLKGSSAT
RHDLKSQITALNLDSAEGLDLELRLGDPPKVK

Transcript Sequence

Transcript ID

VIT_06s0004g05270.t01
Transcript Infomation

cdna chromosome:12X:6:6160463:6161468:-1 gene:VIT_06s0004g05270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGTCAGGCCTTTTCAACCAAGTTCTTTCTCTACTCCACAGATTTCTTGTGTGACTTTCA
TATTTCCAACTTGGATATAAAGTGATGATGATTCCTTCTTGTCCATCTGTAAACTCATCC
TTCCCTCTTTTCAAGCTTGAAATAGCAGCTTGAGGTAATCAGTCAGTCAATCTCAGGCAT
TAACGCAATGGAGCAAGCACGGTATTGGATGTGGAATAAAGGCAAAGGCCGTTGGAAATC
TCATTTGGATGCATCATCCAATTCATGGGAAGAGGAAGCTTTTGCCAAGGATGCATCCCA
GCCTTTTGGTGCTTTTATATGGCCTCCAAGATCTTATTCTTGCAGTTTCTGCAGAAGAGA
ATTCAGGACAGCTCAAGCCTTGGGGGGTCACATGAATGTCCACAGACGGGATAGAGCAAG
GCTTAAGCTGCAGCCTCCTAGTCCCCATAAAGAGATATCCGGTAAATCGATGGGTGATGA
AGATCCAGATCAAATTTGCACCTTGGTTTGCAATCCTAACCCTAATTCAATCCATGGAGT
TGTTGCATCACCGCTCTCACCTTCAAGGGTTTCAGTGCTATCCATTCAAGAGAACTGTGA
AGAGCTGTCCATGATTTCTTCCACTGTTCAAGAACATCATAAAGGTACCTTTTCCTGCTT
CCCTCAATCTTGGTCTAATTCTGTTCCCATTAGGGTTTTCAGCATCCCTGATTCTAAGAG
AAGAGAGGAAAACCCAATGAAGAAGCGAAAATCAAGAGTCCATGATGAGGCTAATTCCAG
CAAATCTGACCTATCCATGAGCTTGAATTTGGTTATTGGTCCTGGCAATGAGCAGACTGT
TAGCTGCAAGAGAAGAAGAACCGATCAAATACCGCTACCTTTCTTCCTTAAAGGAAGTTC
AGCTACTAGGCATGATCTCAAATCGCAAATCACTGCACTTAACCTGGACAGTGCAGAGGG
TTTAGACCTTGAGCTCCGGCTTGGTGACCCACCAAAGGTGAAGTAG