Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05240.t01
CDS Infomation

cds chromosome:12X:6:6143327:6144982:-1 gene:VIT_06s0004g05240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTTACTACTGCGACGACCTCGTTTTGTTCGGCTTGGACCTCCACCTCTTCCAGAGA
GTGGCGGACTTCTTCATCTCCATTGCCTGCTTCTCCATCCCTCTCGAGCTCCTCTATTTC
CTCTCTCGCTCCTCTGCCTTCCCCTTCCGCTTCCTCTTCCTTTGGTTCTCTTCTTTCATC
CTCCTTTGCGGCTTCACCCACTTCTTCTTGGTGGTTGCCACCCAGCGATGCTCCTTCGCT
TTTTGGGTCACGTTGACTGTGATCAAGCTGTGTACTGCTCTGGTGTCGCTCGTGATCTCG
CTTGCTCTGCTCAGGCTTATTCCCAAGATGTTGAACGTGATGGTGAGGGAGGACTTGTTG
CGGAGGAAGACGAGAGAGCTGGGTGTGAAGGTGGAGTTGATGAGGAGGAACGAGGAGACG
TGTCAGTGTATGAGGATGTTGACTCGGGAGATTAGGAAGTCGTTGGACCGCCACACCATT
CTGTACACCACCATTGTGGAGCTCGCTAGGGCTTTGTTCCTGGATAATTGCGCCATCTGG
GCGGTGGACGACTCGGGCTCGGTGGCGACGCTGATTCATGACTTGAGTAGGAGGGAGAAT
CCGGTGTCGATCCCAGTGGAGGGTTCGGAGTTGATGGACATTTTGGGTGGGGATGGGGTT
AAGCTTTTGGGGTCCAATTCGAAGTTGGGTCGGGAGACGGGGAACGGTTTGGGCCTGGCG
ATTCGGGTGCCGATGCTTAGGGTTTCAGATTTCGGTGCGGCGAAGGCTTGTCACGCCATC
CTGGTTTTGGTTCTTCCAGAAGATGAGGTCAGGATTTGGAGCCCAGAAGAGTTCGAACTT
GTGGAAGTTGTGGCAGACCAGGTGGCTGTGGCACTGTCTCATGCTGGAATTGTTGAAGAT
TCAGTAATGATGATAGAAAAACTCATGGAACACAATATTGTTCTGCATAGAGCTATAGAG
ATGGCCCTGATGGCTAATGAGTCAATGTGCTTGGCGCAGAAGGTGATGAATCTAGAGATG
GTTAAACAGAGTCGATCAATTGCTGCAATTCTGTCAATTCTGCAGATTGAGAAAATGGGA
TCAGAGAAACAGAGTAGAATCGTTGGTCATATAGCAAAGATAAGTCATGTGTTGTCTGCT
TTGATGGAAGATGCGATTGGGTTTTTGGGTTTGGGAGACTATAGATTACAACTGAAGTCT
CGGGTGTTTAGCCTCCATTCAATGTTGAAAGACATCGAGAGCATATCCAGGCTCTTGTGT
GCTTTCCAGGGATTGAATTTTGAGATGGAGGTGCCCGAGAAGTTGCCAGATCATGTAATT
GGAGACCACACGAGGATTCTTCAGGCTGTTCTGTACATGCTGGGAAATGTCTTGTGTTTG
GGAGACGGTGGAAGCTTTGTTCTCTGTGTATCTTCCATTAACAGTACAGACACTAATTGC
TTAAAATGGAAACAACTTACTTACGAGGACTCAGCTCTCTTGAAATTCGAGGTCTGCAGA
ACTAATTCAAAAGAATACGACCCGAGTTCATCAGAAGAGATCCGTGAAAAACACAACTCT
GAACCTGCTAATCCTGGGATTTTTAGGTTCAATACATGTGAAAGGATGGCAAAGGTAAAA
TTCTTTAGCAGCTACATTCTGATGGATTGTCTATAG

Peptide Sequence

PEP ID

VIT_06s0004g05240.t01
PEP Infomation

pep chromosome:12X:6:6143327:6144982:-1 gene:VIT_06s0004g05240 transcript:VIT_06s0004g05240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLYYCDDLVLFGLDLHLFQRVADFFISIACFSIPLELLYFLSRSSAFPFRFLFLWFSSFI
LLCGFTHFFLVVATQRCSFAFWVTLTVIKLCTALVSLVISLALLRLIPKMLNVMVREDLL
RRKTRELGVKVELMRRNEETCQCMRMLTREIRKSLDRHTILYTTIVELARALFLDNCAIW
AVDDSGSVATLIHDLSRRENPVSIPVEGSELMDILGGDGVKLLGSNSKLGRETGNGLGLA
IRVPMLRVSDFGAAKACHAILVLVLPEDEVRIWSPEEFELVEVVADQVAVALSHAGIVED
SVMMIEKLMEHNIVLHRAIEMALMANESMCLAQKVMNLEMVKQSRSIAAILSILQIEKMG
SEKQSRIVGHIAKISHVLSALMEDAIGFLGLGDYRLQLKSRVFSLHSMLKDIESISRLLC
AFQGLNFEMEVPEKLPDHVIGDHTRILQAVLYMLGNVLCLGDGGSFVLCVSSINSTDTNC
LKWKQLTYEDSALLKFEVCRTNSKEYDPSSSEEIREKHNSEPANPGIFRFNTCERMAKVK
FFSSYILMDCL

Transcript Sequence

Transcript ID

VIT_06s0004g05240.t01
Transcript Infomation

cdna chromosome:12X:6:6143327:6144982:-1 gene:VIT_06s0004g05240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTTACTACTGCGACGACCTCGTTTTGTTCGGCTTGGACCTCCACCTCTTCCAGAGA
GTGGCGGACTTCTTCATCTCCATTGCCTGCTTCTCCATCCCTCTCGAGCTCCTCTATTTC
CTCTCTCGCTCCTCTGCCTTCCCCTTCCGCTTCCTCTTCCTTTGGTTCTCTTCTTTCATC
CTCCTTTGCGGCTTCACCCACTTCTTCTTGGTGGTTGCCACCCAGCGATGCTCCTTCGCT
TTTTGGGTCACGTTGACTGTGATCAAGCTGTGTACTGCTCTGGTGTCGCTCGTGATCTCG
CTTGCTCTGCTCAGGCTTATTCCCAAGATGTTGAACGTGATGGTGAGGGAGGACTTGTTG
CGGAGGAAGACGAGAGAGCTGGGTGTGAAGGTGGAGTTGATGAGGAGGAACGAGGAGACG
TGTCAGTGTATGAGGATGTTGACTCGGGAGATTAGGAAGTCGTTGGACCGCCACACCATT
CTGTACACCACCATTGTGGAGCTCGCTAGGGCTTTGTTCCTGGATAATTGCGCCATCTGG
GCGGTGGACGACTCGGGCTCGGTGGCGACGCTGATTCATGACTTGAGTAGGAGGGAGAAT
CCGGTGTCGATCCCAGTGGAGGGTTCGGAGTTGATGGACATTTTGGGTGGGGATGGGGTT
AAGCTTTTGGGGTCCAATTCGAAGTTGGGTCGGGAGACGGGGAACGGTTTGGGCCTGGCG
ATTCGGGTGCCGATGCTTAGGGTTTCAGATTTCGGTGCGGCGAAGGCTTGTCACGCCATC
CTGGTTTTGGTTCTTCCAGAAGATGAGGTCAGGATTTGGAGCCCAGAAGAGTTCGAACTT
GTGGAAGTTGTGGCAGACCAGGTGGCTGTGGCACTGTCTCATGCTGGAATTGTTGAAGAT
TCAGTAATGATGATAGAAAAACTCATGGAACACAATATTGTTCTGCATAGAGCTATAGAG
ATGGCCCTGATGGCTAATGAGTCAATGTGCTTGGCGCAGAAGGTGATGAATCTAGAGATG
GTTAAACAGAGTCGATCAATTGCTGCAATTCTGTCAATTCTGCAGATTGAGAAAATGGGA
TCAGAGAAACAGAGTAGAATCGTTGGTCATATAGCAAAGATAAGTCATGTGTTGTCTGCT
TTGATGGAAGATGCGATTGGGTTTTTGGGTTTGGGAGACTATAGATTACAACTGAAGTCT
CGGGTGTTTAGCCTCCATTCAATGTTGAAAGACATCGAGAGCATATCCAGGCTCTTGTGT
GCTTTCCAGGGATTGAATTTTGAGATGGAGGTGCCCGAGAAGTTGCCAGATCATGTAATT
GGAGACCACACGAGGATTCTTCAGGCTGTTCTGTACATGCTGGGAAATGTCTTGTGTTTG
GGAGACGGTGGAAGCTTTGTTCTCTGTGTATCTTCCATTAACAGTACAGACACTAATTGC
TTAAAATGGAAACAACTTACTTACGAGGACTCAGCTCTCTTGAAATTCGAGGTCTGCAGA
ACTAATTCAAAAGAATACGACCCGAGTTCATCAGAAGAGATCCGTGAAAAACACAACTCT
GAACCTGCTAATCCTGGGATTTTTAGGTTCAATACATGTGAAAGGATGGCAAAGGTAAAA
TTCTTTAGCAGCTACATTCTGATGGATTGTCTATAG