Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05210.t01
CDS Infomation

cds chromosome:12X:6:6116884:6125528:-1 gene:VIT_06s0004g05210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTATTTCATCAATGACAAGCACGGTATACGTCAGCGTTATCGAAGATGTCATCAAT
AAGGTCCGCGATGAGTTCGTTAACAACGGCGGTCCTGGAGAGAGTGTTCTCAGCGAGCTT
CAAGGAATTTGGGAAATGAAAATGGTGCAAGCTGGTGTTGTAACTGGTCCGATAGAGAGA
TCCACTGCACCGAAGCAGACAAGTGGTGCCCCAGCCCCTACCCCTCCGGTCCATGATCTT
AATGTACCATACGAAGGAACTGAGGAGTATGAAACTCCTACAGCTGAGATACTATTTCCT
CCGACACCATTGCAGACTCCAATTCAAACACCTTTACCAGGAATGGGGGACAACTCGATG
TATAACATTCCTACTGGACCTACAGAGTATCCTGCTGCACAGGATGGTGGTGGAGCTACT
GACATGAAATCTGGAAGACCACCTTCATACATGCCACCACCTTCCCCTTGGATGCAACAA
AGGCCTCCTCTCAGTGTCGATGTTAACGTTGCTTATGTGGAAGGTCGGGATGAAGGGGAC
AGAGGAAACTCTCAGCAGCCCTTGACACAGGATTTTTTCATGATGTCTTCTGGCAAGCGA
AAACGTGAGGATTTTCCATCACAGTATCACACAAGTGGATACATACCACAGCAGGATGGA
GCTGGAGATCCTGCCCCGGAGGTTTTTGAAGTGGAGGTAAGTCAAGGGAGCAATTCTATC
AAGGGGCATGACATACTCACCAAAGCGAATAGAGAGATATTTCCGCAGGTGGCTGGATCC
TATGTGAGGATTCCTCAACTGGATGGGCCAATTCCTGATCCTTATGAAGATGTGCTTTCT
ACACCCAATATCTATAATTATCAGGGAGTCGTCAATGAAGACTATAACATTGTGAATACA
CCGGCTCCCAATGACATACAAGCTGGTACCCCTGCAGTTGGGATACAAAATGATGTTGGA
GATGATGATGACGATGAGCCACCCTTGAATGAAAATGATGATGATGATTTGGATGATGTG
GAACAGGGAGAGGAGCTAAACACACAGCATTTAGTTTTGGCTCAGTTTGATAAGGTGACA
AGGACTAAGAGCAAGTGGAAATGCACACTCAAGGATGGCATTATGCACATAAACAATAAG
GATATTCTCTTCAACAAGGCAAATGGAGAGTTTGATTTCTGA

Peptide Sequence

PEP ID

VIT_06s0004g05210.t01
PEP Infomation

pep chromosome:12X:6:6116884:6125528:-1 gene:VIT_06s0004g05210 transcript:VIT_06s0004g05210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAISSMTSTVYVSVIEDVINKVRDEFVNNGGPGESVLSELQGIWEMKMVQAGVVTGPIER
STAPKQTSGAPAPTPPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLPGMGDNSM
YNIPTGPTEYPAAQDGGGATDMKSGRPPSYMPPPSPWMQQRPPLSVDVNVAYVEGRDEGD
RGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSGYIPQQDGAGDPAPEVFEVEVSQGSNSI
KGHDILTKANREIFPQVAGSYVRIPQLDGPIPDPYEDVLSTPNIYNYQGVVNEDYNIVNT
PAPNDIQAGTPAVGIQNDVGDDDDDEPPLNENDDDDLDDVEQGEELNTQHLVLAQFDKVT
RTKSKWKCTLKDGIMHINNKDILFNKANGEFDF

Transcript Sequence

Transcript ID

VIT_06s0004g05210.t01
Transcript Infomation

cdna chromosome:12X:6:6116884:6125528:-1 gene:VIT_06s0004g05210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAACCCCCATCCTCTCGTTTCCGTGCTCCTTCTCTCAATTTTCCGTCTAATATTTTCCT
TCCCTAACTTTCCCGAGAAAATCTCTTTCTTCTCTCTTAATTCTTCGAATCGGAGTTTGG
GGAGGGAGATTTCAAGAATCGGGAATGGCTATTTCATCAATGACAAGCACGGTATACGTC
AGCGTTATCGAAGATGTCATCAATAAGGTCCGCGATGAGTTCGTTAACAACGGCGGTCCT
GGAGAGAGTGTTCTCAGCGAGCTTCAAGGAATTTGGGAAATGAAAATGGTGCAAGCTGGT
GTTGTAACTGGTCCGATAGAGAGATCCACTGCACCGAAGCAGACAAGTGGTGCCCCAGCC
CCTACCCCTCCGGTCCATGATCTTAATGTACCATACGAAGGAACTGAGGAGTATGAAACT
CCTACAGCTGAGATACTATTTCCTCCGACACCATTGCAGACTCCAATTCAAACACCTTTA
CCAGGAATGGGGGACAACTCGATGTATAACATTCCTACTGGACCTACAGAGTATCCTGCT
GCACAGGATGGTGGTGGAGCTACTGACATGAAATCTGGAAGACCACCTTCATACATGCCA
CCACCTTCCCCTTGGATGCAACAAAGGCCTCCTCTCAGTGTCGATGTTAACGTTGCTTAT
GTGGAAGGTCGGGATGAAGGGGACAGAGGAAACTCTCAGCAGCCCTTGACACAGGATTTT
TTCATGATGTCTTCTGGCAAGCGAAAACGTGAGGATTTTCCATCACAGTATCACACAAGT
GGATACATACCACAGCAGGATGGAGCTGGAGATCCTGCCCCGGAGGTTTTTGAAGTGGAG
GTAAGTCAAGGGAGCAATTCTATCAAGGGGCATGACATACTCACCAAAGCGAATAGAGAG
ATATTTCCGCAGGTGGCTGGATCCTATGTGAGGATTCCTCAACTGGATGGGCCAATTCCT
GATCCTTATGAAGATGTGCTTTCTACACCCAATATCTATAATTATCAGGGAGTCGTCAAT
GAAGACTATAACATTGTGAATACACCGGCTCCCAATGACATACAAGCTGGTACCCCTGCA
GTTGGGATACAAAATGATGTTGGAGATGATGATGACGATGAGCCACCCTTGAATGAAAAT
GATGATGATGATTTGGATGATGTGGAACAGGGAGAGGAGCTAAACACACAGCATTTAGTT
TTGGCTCAGTTTGATAAGGTGACAAGGACTAAGAGCAAGTGGAAATGCACACTCAAGGAT
GGCATTATGCACATAAACAATAAGGATATTCTCTTCAACAAGGCAAATGGAGAGTTTGAT
TTCTGATTTGCTTCAGAAAACTTCCTTGCCATCAAGTGCCAGTTGCTTTTTGGAGAGTAA
ATATGGAAGTGTCGCTGGGTGTTCCGTAATTTTTCTTGAATTATTATTAGTTAAGTGTAA
GCTTGAGGGGAGAGGACGAGATATTTGATGCTTCTGATGTGGGTTGGATGATTGGCCAGT
TGTACATAAGGGAAGAGCTTTTTTTGGCCTCCAAATGGATGGATGCTTGTGTTTCCCCAA
GTTCACATTTTCTCTGATGGAACGTGTAATTCCATCGACTCTGTATACTGACATTTTG