Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05190.t01
CDS Infomation

cds chromosome:12X:6:6110391:6114619:-1 gene:VIT_06s0004g05190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTCCGAAGCCACCGTTGCTCCAGAGTAGCAGGCTCGTGTTCAAGGTGGGGGCTCAG
AGTGAGGGTTCTTCTGGGGAAGAGACTAGGTCGCTTGATTCTGACGTGAAATACCAGGAG
GTTTTTTCTTGGTCTTCGGTTGTTTTGCCCTTTTTGTTCCCTGCTTTGGGAGGTCTGTTA
TTTGGGTATGACATTGGTGCAACCTCTGGTGCTACTATTTCTTTGCAGTCTCCTGAGCTT
AGTGGCATTACTTGGTTTGAACTTTCAGCTGTTCAGCTTGGTCTTGTGGTTAGTGGTTCC
TTATATGGAGCTCTTCTTGGTTCCATCCTTGTCTACCCAATTGCAGATTTCCTAGGGAGG
AGGGGGGAACTCATTACAGCAGCCATTCTATATGCTCTTGGTGGTTTGATCACCGCATCT
GCTCCAGAACTTGATGTTCTCTTGGTAGGGCGGCTTCTATATGGCCTTGGCATCGGTTTG
GCCATGCATGGGGCTCCTCTTTATATTGCAGAGACTTGCCCATCTCAGATTCGTGGGACT
CTAATATCTTTGAAGGAACTCCTCATAGTTTTGGGGATTTTGTTGGGTTATTTTGTTGGA
AGTTTCGAGATTAATGAAGTGGGAGGGTGGCGTTACATGTATGGGCTTAGTGCTCCGATT
GCTTCATTAATGGGATTAGGCTTGTGGACTCTCCCACCATCCCCTCGCTGGTTACTCCTC
AGGGCAGTTCAAGGTAAAGGGTCTTTGCAAGAGAACAAGGAGAAGGCCATCCATGCTCTT
AGTAAATTGAGAGGACGACCTGCTGGTGACAAAGTGTCTGATATGCAAATAGAACACACT
CTGGCCTCATTGAAATCGGCCTATACAGATCAGGAATCTGAAGGAAGTTTCTTGGAGGTG
TTTCAAGGGCCAAGTTTGAAAGCTTTCATAATTGGTGGAGGTTTGGTCCTTTCTCAGCAG
ATAACTGGGCAACCAAGTGTCCTGTACTTTGCGGGTTCAATTCTCCAGACTGCTGGGTTC
TCTGCTGCTTCTGATGCTACCCGTGTTTCAGTTTTGATTGGTTTTTTCAAGTTATTGATG
ACAGGGATTGCTGTTCTAAAAGTTGATGATATTGGAAGAAGACCCTTGCTGATCGGAGGA
GTTGGTGGACTTGCTCTTTCCTTACTTCTCCTTTCAGCATATTACAAATTTCTTGGGGGC
TTCCCTGTTGTTGCTGTAGCTGCTCTACTTCTCTATGTTGGCTGCTACCAGATATCCTTT
GGACCAATCAGTTGGCTTATGGTGTCAGAGATATTCCCTCTTCGCACAAGAGGGCGAGGA
ATTAGTCTTGCTGTTCTTACTAACTTTGGCTCAAATGCAATTGTGACTTTTGCTTTTTCA
CCATTGGAGGAGCTGCTGGGGGCAGAGAACCTTTTCCTCCTCTTCGGTATTATTGCATTG
CTATCACTCCTTTTTGTAATTGTCTATGTTCCAGAGACCAAAGGTTTGAGCTTGGAAGAA
ATTGAATCCAAAATCTTGAAGTGA

Peptide Sequence

PEP ID

VIT_06s0004g05190.t01
PEP Infomation

pep chromosome:12X:6:6110391:6114619:-1 gene:VIT_06s0004g05190 transcript:VIT_06s0004g05190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPPKPPLLQSSRLVFKVGAQSEGSSGEETRSLDSDVKYQEVFSWSSVVLPFLFPALGGLL
FGYDIGATSGATISLQSPELSGITWFELSAVQLGLVVSGSLYGALLGSILVYPIADFLGR
RGELITAAILYALGGLITASAPELDVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGT
LISLKELLIVLGILLGYFVGSFEINEVGGWRYMYGLSAPIASLMGLGLWTLPPSPRWLLL
RAVQGKGSLQENKEKAIHALSKLRGRPAGDKVSDMQIEHTLASLKSAYTDQESEGSFLEV
FQGPSLKAFIIGGGLVLSQQITGQPSVLYFAGSILQTAGFSAASDATRVSVLIGFFKLLM
TGIAVLKVDDIGRRPLLIGGVGGLALSLLLLSAYYKFLGGFPVVAVAALLLYVGCYQISF
GPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLEELLGAENLFLLFGIIAL
LSLLFVIVYVPETKGLSLEEIESKILK

Transcript Sequence

Transcript ID

VIT_06s0004g05190.t01
Transcript Infomation

cdna chromosome:12X:6:6110391:6114619:-1 gene:VIT_06s0004g05190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTAACCGTCTGATCATTCTTTCTCGTCATTACCAGATGGCTTCCAGTTCATGGCCTCAG
TCTCTCTTCAACCTCAAGCTCTCACATTCACACCCAGCACTTCACCATCCCAAGCACTCC
CAGTCTCTCTTCTTCAAATTTAACTCTCACCCATCTTCACCCTTCTTCTATGGCTCTCAA
TTCAAGTCCCAAACTTACATGCCTCCGAAGCCACCGTTGCTCCAGAGTAGCAGGCTCGTG
TTCAAGGTGGGGGCTCAGAGTGAGGGTTCTTCTGGGGAAGAGACTAGGTCGCTTGATTCT
GACGTGAAATACCAGGAGGTTTTTTCTTGGTCTTCGGTTGTTTTGCCCTTTTTGTTCCCT
GCTTTGGGAGGTCTGTTATTTGGGTATGACATTGGTGCAACCTCTGGTGCTACTATTTCT
TTGCAGTCTCCTGAGCTTAGTGGCATTACTTGGTTTGAACTTTCAGCTGTTCAGCTTGGT
CTTGTGGTTAGTGGTTCCTTATATGGAGCTCTTCTTGGTTCCATCCTTGTCTACCCAATT
GCAGATTTCCTAGGGAGGAGGGGGGAACTCATTACAGCAGCCATTCTATATGCTCTTGGT
GGTTTGATCACCGCATCTGCTCCAGAACTTGATGTTCTCTTGGTAGGGCGGCTTCTATAT
GGCCTTGGCATCGGTTTGGCCATGCATGGGGCTCCTCTTTATATTGCAGAGACTTGCCCA
TCTCAGATTCGTGGGACTCTAATATCTTTGAAGGAACTCCTCATAGTTTTGGGGATTTTG
TTGGGTTATTTTGTTGGAAGTTTCGAGATTAATGAAGTGGGAGGGTGGCGTTACATGTAT
GGGCTTAGTGCTCCGATTGCTTCATTAATGGGATTAGGCTTGTGGACTCTCCCACCATCC
CCTCGCTGGTTACTCCTCAGGGCAGTTCAAGGTAAAGGGTCTTTGCAAGAGAACAAGGAG
AAGGCCATCCATGCTCTTAGTAAATTGAGAGGACGACCTGCTGGTGACAAAGTGTCTGAT
ATGCAAATAGAACACACTCTGGCCTCATTGAAATCGGCCTATACAGATCAGGAATCTGAA
GGAAGTTTCTTGGAGGTGTTTCAAGGGCCAAGTTTGAAAGCTTTCATAATTGGTGGAGGT
TTGGTCCTTTCTCAGCAGATAACTGGGCAACCAAGTGTCCTGTACTTTGCGGGTTCAATT
CTCCAGACTGCTGGGTTCTCTGCTGCTTCTGATGCTACCCGTGTTTCAGTTTTGATTGGT
TTTTTCAAGTTATTGATGACAGGGATTGCTGTTCTAAAAGTTGATGATATTGGAAGAAGA
CCCTTGCTGATCGGAGGAGTTGGTGGACTTGCTCTTTCCTTACTTCTCCTTTCAGCATAT
TACAAATTTCTTGGGGGCTTCCCTGTTGTTGCTGTAGCTGCTCTACTTCTCTATGTTGGC
TGCTACCAGATATCCTTTGGACCAATCAGTTGGCTTATGGTGTCAGAGATATTCCCTCTT
CGCACAAGAGGGCGAGGAATTAGTCTTGCTGTTCTTACTAACTTTGGCTCAAATGCAATT
GTGACTTTTGCTTTTTCACCATTGGAGGAGCTGCTGGGGGCAGAGAACCTTTTCCTCCTC
TTCGGTATTATTGCATTGCTATCACTCCTTTTTGTAATTGTCTATGTTCCAGAGACCAAA
GGTTTGAGCTTGGAAGAAATTGAATCCAAAATCTTGAAGTGAAATCTTGAAGGCAACAGA
CCTAT