Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05180.t01
CDS Infomation

cds chromosome:12X:6:6106696:6109243:-1 gene:VIT_06s0004g05180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTACAACAGTCTCAACCATTGGAGCTGTTAACAGAACACCGCTGAGCTTGAACAGC
TCTGGTACTGGAGCTTCAGTCCCAAGCTCCGCCTTCTTCGGGAGCAGTTTGAAGAAGGTG
AGCTCAAGATTCACCCACCCAAAGATTGCATCTGGAAGCTTTAAGGTGGTTGCAGAAATC
GACGAGAATGAGCAAACTGAAAAGGACAGATGGAAAGGGCTTGCCTACGATGTGTCTGAT
GACCAGCAGGATATCACCAGAGGAAAGGGAATGGTGGATTCTCTTTTCCAAGCTCCCATG
CAATCTGGAACCCACTATGCTGTGATGAGTTCATATGAATACCTCAGCACCGGACTTCGC
CAATACAACTTGGATAACAACATGGATGGATTCTACATTGCTCCAGCATTCATGGACAAG
CTTGTGGTTCACATCACCAAAAACTTCATGACCCTGCCTAACATCAAGGTTCCCCTCATT
CTGGGTATTTGGGGAGGCAAAGGTCAGGGGAAATCTTTCCAGTGTGAGCTTGTCTTCTCT
AAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAACTTGAAAGTGGGAATGCAGGA
GAACCTGCAAAACTGATAAGGCAGAGGTACCGTGAGGCAGCTGACATCATCAGGAAGGGA
AAAATGTGCTGCCTCTTCATCAATGATCTTGATGCAGGAGCAGGTAGGCTTGGTGGAACT
ACCCAATACACTGTCAACAACCAGATGGTGAATGCAACCCTCATGAACATTGCCGATAAC
CCGACAAATGTCCAGCTCCCTGGTATGTACAACAAAGAGGAAAATCCCCGCGTCCCCATC
ATTGTAACTGGCAATGACTTCTCAACTCTGTATGCCCCTCTCATTCGTGATGGTCGTATG
GAGAAATTCTACTGGGCTCCTAATAGGGAGGACCGGATTGGTGTTTGCAAGGGAATCTTC
AGGAGCGACAACGTTCCTGATGATGATATTGTCAAGATTGTTGACACCTTCCCAGGGCAA
TCCATTGACTTCTTTGGTGCCCTCAGAGCTCGGGTTTATGACGATGAAGTAAGGAAGTGG
ATATCAGGTGTTGGAGTTGACTTCATTGGCAAGAAGCTTGTTAACTCAAAGGAGGGTCCC
CCAACTTTTGAGCAGCCCAAGATGACAATTGAGAAGCTCCTCGAGTATGGTAACATGCTT
GTGATGGAACAGGAGAATGTGAAGAGAGTTCAATTGGCTGACAAGTACTTAAGCGAGGCA
GCTCTTGGAGATGCGAACGTGGATTCCATCGAGAGAGGAACCTTTTATGGCAAGGCAGCC
CAACAAGTTGGTGTTCCTGTTCCTGAAGGTTGCACTGATCCATCTGCAGCAAACTTTGAT
CCAACAGCTAGGAGTGATAATGGGAGCTGCCAGTACTGA

Peptide Sequence

PEP ID

VIT_06s0004g05180.t01
PEP Infomation

pep chromosome:12X:6:6106696:6109243:-1 gene:VIT_06s0004g05180 transcript:VIT_06s0004g05180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATTVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEI
DENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLR
QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFS
KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGT
TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM
EKFYWAPNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKW
ISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLSEA
ALGDANVDSIERGTFYGKAAQQVGVPVPEGCTDPSAANFDPTARSDNGSCQY

Transcript Sequence

Transcript ID

VIT_06s0004g05180.t01
Transcript Infomation

cdna chromosome:12X:6:6106696:6109243:-1 gene:VIT_06s0004g05180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGCTGGACTTGAATTTCCTCTGATTCGATTGCAGCCTCCTTGGTGATTAATCGCCATG
GCTACAACAGTCTCAACCATTGGAGCTGTTAACAGAACACCGCTGAGCTTGAACAGCTCT
GGTACTGGAGCTTCAGTCCCAAGCTCCGCCTTCTTCGGGAGCAGTTTGAAGAAGGTGAGC
TCAAGATTCACCCACCCAAAGATTGCATCTGGAAGCTTTAAGGTGGTTGCAGAAATCGAC
GAGAATGAGCAAACTGAAAAGGACAGATGGAAAGGGCTTGCCTACGATGTGTCTGATGAC
CAGCAGGATATCACCAGAGGAAAGGGAATGGTGGATTCTCTTTTCCAAGCTCCCATGCAA
TCTGGAACCCACTATGCTGTGATGAGTTCATATGAATACCTCAGCACCGGACTTCGCCAA
TACAACTTGGATAACAACATGGATGGATTCTACATTGCTCCAGCATTCATGGACAAGCTT
GTGGTTCACATCACCAAAAACTTCATGACCCTGCCTAACATCAAGGTTCCCCTCATTCTG
GGTATTTGGGGAGGCAAAGGTCAGGGGAAATCTTTCCAGTGTGAGCTTGTCTTCTCTAAG
ATGGGAATCAACCCCATCATGATGAGTGCTGGAGAACTTGAAAGTGGGAATGCAGGAGAA
CCTGCAAAACTGATAAGGCAGAGGTACCGTGAGGCAGCTGACATCATCAGGAAGGGAAAA
ATGTGCTGCCTCTTCATCAATGATCTTGATGCAGGAGCAGGTAGGCTTGGTGGAACTACC
CAATACACTGTCAACAACCAGATGGTGAATGCAACCCTCATGAACATTGCCGATAACCCG
ACAAATGTCCAGCTCCCTGGTATGTACAACAAAGAGGAAAATCCCCGCGTCCCCATCATT
GTAACTGGCAATGACTTCTCAACTCTGTATGCCCCTCTCATTCGTGATGGTCGTATGGAG
AAATTCTACTGGGCTCCTAATAGGGAGGACCGGATTGGTGTTTGCAAGGGAATCTTCAGG
AGCGACAACGTTCCTGATGATGATATTGTCAAGATTGTTGACACCTTCCCAGGGCAATCC
ATTGACTTCTTTGGTGCCCTCAGAGCTCGGGTTTATGACGATGAAGTAAGGAAGTGGATA
TCAGGTGTTGGAGTTGACTTCATTGGCAAGAAGCTTGTTAACTCAAAGGAGGGTCCCCCA
ACTTTTGAGCAGCCCAAGATGACAATTGAGAAGCTCCTCGAGTATGGTAACATGCTTGTG
ATGGAACAGGAGAATGTGAAGAGAGTTCAATTGGCTGACAAGTACTTAAGCGAGGCAGCT
CTTGGAGATGCGAACGTGGATTCCATCGAGAGAGGAACCTTTTATGGCAAGGCAGCCCAA
CAAGTTGGTGTTCCTGTTCCTGAAGGTTGCACTGATCCATCTGCAGCAAACTTTGATCCA
ACAGCTAGGAGTGATAATGGGAGCTGCCAGTACTGAAGCCTACCTCTTTTATTCTTCCCT
TTATATTGGACCATCTCAGGAAGGATAAACCCTTTCTGGGGAATGAGGAATTGGTCATAT
TGCCACCTCTACTTTCATGGATTAATATCATGTAATTTTGTGTTATGATATTCCCTCTGT
TTAAATTCCAATG