Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05070.t01
CDS Infomation

cds chromosome:12X:6:6012506:6013936:-1 gene:VIT_06s0004g05070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTCTGTTCCTTCCTCCAAAGCTCTCAAGTCAACCTTGCTAATCACAGCACTTTTG
CTTCTAAAATTCTCCACTATCTACGCTCATGGAGGTGATGACCATGGCAACAGCGGTGAT
GAAGACTTGCATGAAAGAGGTTTAATTTTGGTGAAAATCTGGTGTCTAATAATCCTCTTC
GTGAGCACTTTTGCAGGTGGAGTTTCCCCTTACTTCTATAGATGGAATGAGAGCTTTCTT
CTGCTGGGCACGCAGTTTGCAGGCGGGGTCTTCCTGGGGACCTCTCTAATGCATTTCTTG
AGCGACTCCAATGAGACTTTTGAAGAGCTCACAGCAAAAGCATACCCTTTTGCCTTCATG
CTAGCATCAGCGGGTTATCTTCTCACCATGTTAGGAGATTGCATAGTGATCTTTGTTACC
AAGGGTAGCGAAAGAGAGGCAAAAGTGGAAGCTGCTGAGGAGGGTGCGACAGAGGTGCCT
GTGGGTCTCAACCCAGCATTCTTGCAGACAACATCTTTTGGGGACACCATGCTTCTCATC
CTTGCTCTGTGTTTTCATTCAGTTTTTGAGGGCATTGCCATCGGGGTTTCAGGTACAAAG
GCAGAAGCATGGAGGAACCTGTGGACAATATCATTGCACAAGATATTTGCAGCCATTGCA
ATGGGAATTGCACTGCTGAGGATGAAACCCAAGAGGCCATTTGTGACAACTGCGGCCTAT
TCTTTTGCCTTTGCGGTTTCGAGCCCCATCGGAGTGGGAATAGGCATTGCCATAGATGCC
ACAACCCAAGGGAAGGCAGCTGATTGGATATATGCTATATCAATGGGTCTTGCTTGTGGG
GTTTTCATCTATGTTGCCATCAACCATCTCGTTGCCAAGGGCTTCAAACCACAAACTCAG
CTTTATTTTGACACTCCCTTTTTCAAGTTTCTTGCTGTGCTTGCTGGGGTGGGAGTCATA
GCTGTTGTTATGATTTGGGATTAG

Peptide Sequence

PEP ID

VIT_06s0004g05070.t01
PEP Infomation

pep chromosome:12X:6:6012506:6013936:-1 gene:VIT_06s0004g05070 transcript:VIT_06s0004g05070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASVPSSKALKSTLLITALLLLKFSTIYAHGGDDHGNSGDEDLHERGLILVKIWCLIILF
VSTFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSLMHFLSDSNETFEELTAKAYPFAFM
LASAGYLLTMLGDCIVIFVTKGSEREAKVEAAEEGATEVPVGLNPAFLQTTSFGDTMLLI
LALCFHSVFEGIAIGVSGTKAEAWRNLWTISLHKIFAAIAMGIALLRMKPKRPFVTTAAY
SFAFAVSSPIGVGIGIAIDATTQGKAADWIYAISMGLACGVFIYVAINHLVAKGFKPQTQ
LYFDTPFFKFLAVLAGVGVIAVVMIWD

Transcript Sequence

Transcript ID

VIT_06s0004g05070.t01
Transcript Infomation

cdna chromosome:12X:6:6012506:6013936:-1 gene:VIT_06s0004g05070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACATTAACTGATTCAAACCAAAAGAAGAGTTTGATGACCCCATTCATGGCCTCTGTTCCT
TCCTCCAAAGCTCTCAAGTCAACCTTGCTAATCACAGCACTTTTGCTTCTAAAATTCTCC
ACTATCTACGCTCATGGAGGTGATGACCATGGCAACAGCGGTGATGAAGACTTGCATGAA
AGAGGTTTAATTTTGGTGAAAATCTGGTGTCTAATAATCCTCTTCGTGAGCACTTTTGCA
GGTGGAGTTTCCCCTTACTTCTATAGATGGAATGAGAGCTTTCTTCTGCTGGGCACGCAG
TTTGCAGGCGGGGTCTTCCTGGGGACCTCTCTAATGCATTTCTTGAGCGACTCCAATGAG
ACTTTTGAAGAGCTCACAGCAAAAGCATACCCTTTTGCCTTCATGCTAGCATCAGCGGGT
TATCTTCTCACCATGTTAGGAGATTGCATAGTGATCTTTGTTACCAAGGGTAGCGAAAGA
GAGGCAAAAGTGGAAGCTGCTGAGGAGGGTGCGACAGAGGTGCCTGTGGGTCTCAACCCA
GCATTCTTGCAGACAACATCTTTTGGGGACACCATGCTTCTCATCCTTGCTCTGTGTTTT
CATTCAGTTTTTGAGGGCATTGCCATCGGGGTTTCAGGTACAAAGGCAGAAGCATGGAGG
AACCTGTGGACAATATCATTGCACAAGATATTTGCAGCCATTGCAATGGGAATTGCACTG
CTGAGGATGAAACCCAAGAGGCCATTTGTGACAACTGCGGCCTATTCTTTTGCCTTTGCG
GTTTCGAGCCCCATCGGAGTGGGAATAGGCATTGCCATAGATGCCACAACCCAAGGGAAG
GCAGCTGATTGGATATATGCTATATCAATGGGTCTTGCTTGTGGGGTTTTCATCTATGTT
GCCATCAACCATCTCGTTGCCAAGGGCTTCAAACCACAAACTCAGCTTTATTTTGACACT
CCCTTTTTCAAGTTTCTTGCTGTGCTTGCTGGGGTGGGAGTCATAGCTGTTGTTATGATT
TGGGATTAGTGAACTCATGAATTTAGTTTTCC