Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g05030.t01
CDS Infomation

cds chromosome:12X:6:5958486:5965547:-1 gene:VIT_06s0004g05030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATCTTGTCGAGGCTTGGCCGTTCTCTGTCACGATCCTCTACTGCAAAACCACGGAAC
GTGTTATCTGGTGGTAATGTTGGAAGATCGGCGTTTTTGAACGAAGCCCTTTCCAGGGCA
CCGCATTACAGTACCGACCTGGGTCAACTGGATGGTGGGTTAGGGTTTTTGAGGGGATAT
TTAACTTCCATTGGAGCGAGCAGAGGGTTCGTCGGGAAGTCGTATTTATCTGATTTGAAT
TTTGTTCTTGCGAACCCGAGAATCCGAAGGTTTTTATCGAGTGAAGCCCCTAAGAAGAAG
AATTATGAGAATTTTTATCCAAAAAATAAGAAGGAAACCCCAAAAGGGGAAGAGCAGAAG
TCAGAGTCGAAAGAGGATTCAAACACAGATGATCATGGAAATTTTCAGGAAACTTTCATG
AAGCAGCTTCAAAATGTCCTAACTCCTTTGTTGGTGATTGGACTGTTTCTTTCATCCTTC
TCTTTTGGTCCACGTGAACAGAAGCAGATTAGTTTCCAAGAGTTTAAAAACAAGCTTCTG
GAACCAGGTTTGGTGGACCACATAGTTGTTTCTAATAAATCAGTTGCAAAGGTGTATGTA
AGGGGCTCACCACTCAATCAAGCAAGTGATGATGTTGTCCAAGGGCCAATTAATGGAAGC
CCTGCAAGAGGAAATGCTCAGTATAAATTCTTTTTCAATATTGGTAGTGTCGAATCTTTT
GAGGAAAAGTTGGAGGAAGCTCAAGAAGTATTAGGGATCGACCCTCACAATTATGTTCCT
GTTACATATGTCTCTGAAATGGTCTGGTACCAAGAATTGATGAGATTTGCACCCACACTT
GCGCTTTTGGGGGCCCTCTGGTACATGGGGCGGCGGATGCAAAGTGGATTAGGTGTTGGT
GGTACGGGTGGAAGGGGCGGTCGTGGAATATTCAACATAGGAAAAGCCCATATTATGAAA
GTGGATAAGAATGCTAAGAATAAGGTCTTTTTCAAAGATGTTGCTGGATGTGATGAAGCA
AAGCAAGAAATCATGGAATTTGTTCACTTCCTCAAGAATCCTAAAAAATATGAAGAGTTG
GGAGCAAAAATTCCAAAAGGTGCTCTTTTGGTGGGCCCTCCAGGCACAGGGAAGACCCTT
CTAGCAAAAGCAACTGCAGGAGAATCTGCCGTGCCTTTCTTATCCATATCTGGTTCAGAT
TTTATGGAGATGTTTGTTGGTGTTGGACCATCCAGGGTGAGAAACTTGTTTCAGGAAGCA
AGGCAGTGTGCACCTAGTATAATATTTATTGATGAGATTGATGCAATTGGTCGAGCAAGA
GGACGTGGAGGCTTCTCAGGTTCCAATGATGAGCGTGAAAGTACTCTTAATCAGTTGCTT
GTAGAGATGGATGGATTTGGAACCACTGCTGGAGTAGTTGTGCTTGCCGGCACTAATCGA
CCTGATATTTTAGACAAAGCTCTGTTGAGGCCTGGTAGATTTGATCGCCAAATTACTATT
GATAAACCTGATATTAAAGGACGTGATCAGATATTTAAGATCTACCTGAAAAAGATCAAA
CTTGATCGCGAGCCATCATATTACTCTCAAAGGCTTGCGGCCCTCACTCCTGGATTTGCA
GGAGCAGACATTGCAAATGTTTGTAATGAAGCTGCTTTAATCGCTGCAAGGAATGAAGGA
ACACAGGTCACAATGGATCATTTTGAGGCAGCTATAGATAGGATAATTGGTGGTCTGGAG
AAGAAGAATAAGGTGATAAGCCAGCTGGAAAGACGGACTGTTGCTTACCATGAATCAGGT
CATGCTGTTGCTGGTTGGTTCTTGGAACATGCGGAACCCTTGTTGAAAGTGACTATTGTT
CCTCGTGGTACAGCAGCACTTGGTTTTGCCCAGTATGTTCCTAATGAAAACCTTCTCATG
ACCAAGGAGCAGCTTTTCGACATGACATGTATGACCCTTGGTGGTCGAGCAGCTGAACAG
GTTTTGATTGGTAGAATATCGACAGGAGCCCAAAATGATCTGGAGAAGGTAACAAAGATG
ACATATGCTCAGGTCGCAGTCTATGGTTTTAGTGACAAGGTGGGCCTCCTCTCTTTCCCT
CAACGGGAAGATGGATTCGAGATGACCAAGCCCTACAGCAGCAAGACTGGGGCAATCATT
GACACGGAAGTGCGAGAATGGGTTGGTAAGGCTTATGAACGCACTCTTCAGCTGATAGAG
GAGCACAAAGAACAAGTAGCTCAGATTGCTGAGCTGTTACTTGAAAAGGAAGTTCTTCAC
CAAGATGACTTGACCAGAGTTTTGGGAGAGAGACCATTCAAATCACTTGAACCCTCAAAC
TATGACAGATTTAAGCAAGGGTTTGAAGAGGAAAATGATAAGAGTGCGATAACCCAAGAC
AGCAGCAGAACTGAGCCAGAGAATGGTGCACCACCTCTGGAACCAGAGGTCGTCCCCGCA
TGA

Peptide Sequence

PEP ID

VIT_06s0004g05030.t01
PEP Infomation

pep chromosome:12X:6:5958486:5965547:-1 gene:VIT_06s0004g05030 transcript:VIT_06s0004g05030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MILSRLGRSLSRSSTAKPRNVLSGGNVGRSAFLNEALSRAPHYSTDLGQLDGGLGFLRGY
LTSIGASRGFVGKSYLSDLNFVLANPRIRRFLSSEAPKKKNYENFYPKNKKETPKGEEQK
SESKEDSNTDDHGNFQETFMKQLQNVLTPLLVIGLFLSSFSFGPREQKQISFQEFKNKLL
EPGLVDHIVVSNKSVAKVYVRGSPLNQASDDVVQGPINGSPARGNAQYKFFFNIGSVESF
EEKLEEAQEVLGIDPHNYVPVTYVSEMVWYQELMRFAPTLALLGALWYMGRRMQSGLGVG
GTGGRGGRGIFNIGKAHIMKVDKNAKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL
GAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEA
RQCAPSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNR
PDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDREPSYYSQRLAALTPGFA
GADIANVCNEAALIAARNEGTQVTMDHFEAAIDRIIGGLEKKNKVISQLERRTVAYHESG
HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQ
VLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMTKPYSSKTGAII
DTEVREWVGKAYERTLQLIEEHKEQVAQIAELLLEKEVLHQDDLTRVLGERPFKSLEPSN
YDRFKQGFEEENDKSAITQDSSRTEPENGAPPLEPEVVPA

Transcript Sequence

Transcript ID

VIT_06s0004g05030.t01
Transcript Infomation

cdna chromosome:12X:6:5958486:5965547:-1 gene:VIT_06s0004g05030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAAACACCCACAAAGCAAAAATATCAGGCAAACAGTCCCTAGTATTTGTCTATCTTCA
TTCGAACTTGGAACCCTAAATAGAAAGAAAAAACATTTCTCTCAAATGACGAATCTGTGA
ACCAATCGTATAAGATTTGCTTCCTTGGATCCATTTGAAGAAATCCCAGTACTCTATTTC
TGCTTCAGATTCGTCAAATAATGATCTTGTCGAGGCTTGGCCGTTCTCTGTCACGATCCT
CTACTGCAAAACCACGGAACGTGTTATCTGGTGGTAATGTTGGAAGATCGGCGTTTTTGA
ACGAAGCCCTTTCCAGGGCACCGCATTACAGTACCGACCTGGGTCAACTGGATGGTGGGT
TAGGGTTTTTGAGGGGATATTTAACTTCCATTGGAGCGAGCAGAGGGTTCGTCGGGAAGT
CGTATTTATCTGATTTGAATTTTGTTCTTGCGAACCCGAGAATCCGAAGGTTTTTATCGA
GTGAAGCCCCTAAGAAGAAGAATTATGAGAATTTTTATCCAAAAAATAAGAAGGAAACCC
CAAAAGGGGAAGAGCAGAAGTCAGAGTCGAAAGAGGATTCAAACACAGATGATCATGGAA
ATTTTCAGGAAACTTTCATGAAGCAGCTTCAAAATGTCCTAACTCCTTTGTTGGTGATTG
GACTGTTTCTTTCATCCTTCTCTTTTGGTCCACGTGAACAGAAGCAGATTAGTTTCCAAG
AGTTTAAAAACAAGCTTCTGGAACCAGGTTTGGTGGACCACATAGTTGTTTCTAATAAAT
CAGTTGCAAAGGTGTATGTAAGGGGCTCACCACTCAATCAAGCAAGTGATGATGTTGTCC
AAGGGCCAATTAATGGAAGCCCTGCAAGAGGAAATGCTCAGTATAAATTCTTTTTCAATA
TTGGTAGTGTCGAATCTTTTGAGGAAAAGTTGGAGGAAGCTCAAGAAGTATTAGGGATCG
ACCCTCACAATTATGTTCCTGTTACATATGTCTCTGAAATGGTCTGGTACCAAGAATTGA
TGAGATTTGCACCCACACTTGCGCTTTTGGGGGCCCTCTGGTACATGGGGCGGCGGATGC
AAAGTGGATTAGGTGTTGGTGGTACGGGTGGAAGGGGCGGTCGTGGAATATTCAACATAG
GAAAAGCCCATATTATGAAAGTGGATAAGAATGCTAAGAATAAGGTCTTTTTCAAAGATG
TTGCTGGATGTGATGAAGCAAAGCAAGAAATCATGGAATTTGTTCACTTCCTCAAGAATC
CTAAAAAATATGAAGAGTTGGGAGCAAAAATTCCAAAAGGTGCTCTTTTGGTGGGCCCTC
CAGGCACAGGGAAGACCCTTCTAGCAAAAGCAACTGCAGGAGAATCTGCCGTGCCTTTCT
TATCCATATCTGGTTCAGATTTTATGGAGATGTTTGTTGGTGTTGGACCATCCAGGGTGA
GAAACTTGTTTCAGGAAGCAAGGCAGTGTGCACCTAGTATAATATTTATTGATGAGATTG
ATGCAATTGGTCGAGCAAGAGGACGTGGAGGCTTCTCAGGTTCCAATGATGAGCGTGAAA
GTACTCTTAATCAGTTGCTTGTAGAGATGGATGGATTTGGAACCACTGCTGGAGTAGTTG
TGCTTGCCGGCACTAATCGACCTGATATTTTAGACAAAGCTCTGTTGAGGCCTGGTAGAT
TTGATCGCCAAATTACTATTGATAAACCTGATATTAAAGGACGTGATCAGATATTTAAGA
TCTACCTGAAAAAGATCAAACTTGATCGCGAGCCATCATATTACTCTCAAAGGCTTGCGG
CCCTCACTCCTGGATTTGCAGGAGCAGACATTGCAAATGTTTGTAATGAAGCTGCTTTAA
TCGCTGCAAGGAATGAAGGAACACAGGTCACAATGGATCATTTTGAGGCAGCTATAGATA
GGATAATTGGTGGTCTGGAGAAGAAGAATAAGGTGATAAGCCAGCTGGAAAGACGGACTG
TTGCTTACCATGAATCAGGTCATGCTGTTGCTGGTTGGTTCTTGGAACATGCGGAACCCT
TGTTGAAAGTGACTATTGTTCCTCGTGGTACAGCAGCACTTGGTTTTGCCCAGTATGTTC
CTAATGAAAACCTTCTCATGACCAAGGAGCAGCTTTTCGACATGACATGTATGACCCTTG
GTGGTCGAGCAGCTGAACAGGTTTTGATTGGTAGAATATCGACAGGAGCCCAAAATGATC
TGGAGAAGGTAACAAAGATGACATATGCTCAGGTCGCAGTCTATGGTTTTAGTGACAAGG
TGGGCCTCCTCTCTTTCCCTCAACGGGAAGATGGATTCGAGATGACCAAGCCCTACAGCA
GCAAGACTGGGGCAATCATTGACACGGAAGTGCGAGAATGGGTTGGTAAGGCTTATGAAC
GCACTCTTCAGCTGATAGAGGAGCACAAAGAACAAGTAGCTCAGATTGCTGAGCTGTTAC
TTGAAAAGGAAGTTCTTCACCAAGATGACTTGACCAGAGTTTTGGGAGAGAGACCATTCA
AATCACTTGAACCCTCAAACTATGACAGATTTAAGCAAGGGTTTGAAGAGGAAAATGATA
AGAGTGCGATAACCCAAGACAGCAGCAGAACTGAGCCAGAGAATGGTGCACCACCTCTGG
AACCAGAGGTCGTCCCCGCATGATAACTTTGGACATTCTTTGTGCTTGTACATGAATAAA
TTAAGCTGTTTACATGAATTATAATTTTGTACAACTGTCATTTCTGATTATAGCAGCATT
ATCTCTTTGGAGAACTCTCTCCAAATTTTCTTCAAGGAGACCAGGTTATGGCTGTTT