Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g04930.t01
CDS Infomation

cds chromosome:12X:6:5891010:5899924:1 gene:VIT_06s0004g04930 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCAGTCCCAAGAAGAACGAAAGTAAGGGCTTTTTCGCCGCAATGACTTCCGGCTTG
TCCATGTTCGGCAACGCCATGCACAGATCTGTCAACGGGTTGCTTGGTTATGAAGGTGTG
GAAGTTATAAACCCAGAGGGAGGCAAAGAAGATGCGGAAGAAGAAGCTCAAAGAGGAAGA
TGGAAGGAGGAGGAAAGGGACAGTTACTGGAAGATGATGCAAAAGTATATAGGTTCAGAT
GTCACCTCAATGGTGACACTTCCAGTTCTGATTTTTGAGCCAATGACAATGCTTCAGAAA
ATGGCAGAATTAATGGAATACTCCCACCTGTTAGATAAAGCAGATGAATGCGAGGATCCT
TACATGCGATTGGTGTATGCTTCATCATGGGCTATATCTGTCTATTATGCCTACCAACGA
ACTTGGAAGCCTTTTAATCCCATTCTTGGTGAGACTTATGAAATGGCTAATCATGGTGGA
ATAACATTTATTTCAGAGCAAGTCAGCCATCATCCTCCGATGAGTGCTGGGCATGCTGAA
AATGAGCATTTCACTTATGAAGTTACATCAAAATTAAAAACCAAATTTTTAGGGAACTTC
CTGGATGTCTATCCTGTTGGAAGAACACGTGTTACTCTAAAAAGAGATGGTGTTGTCCTA
GATTTGGTGCCACCTCCCACAAAGGTTAACAACCTGATTTTTGGACGGACATGGGTTGAT
TCACCAGGGGAGATGATCATGTCCAATATGACAACCGGGGACAAGGCTGTGCTATATTTT
CAACCATGTGGCTGGTTTGGGGCTGGTCGCTACGAAGTGGATGGATATGTGTATAATGCT
GAGGAGGAACCCAAAATATTGATGACAGGGAAATGGAATGAGTCAATGAGTTACCAACCA
TGTGACATTGAAGGGGAGCCTCTTACAGGCACAGATCTGAAGGAGGTTTGGCATGTTGCT
GATGTTCCTGAGGGCGACAAATTTCAGTACACTCATTTTGCACATAAAATAAACAGCTTT
GACACAGCTCCTAGGAAGTTGTTGGCATCAGATTCTCGTTTGCGCCCTGATAGATATGCA
CTTGAAAAGGGAGATCTATCAAAAGCTGGTGCTGAAAAGAGCAGTTTGGAGGAGAGGCAA
AGAGCAGAAAAGAGAAACCGAGAGGCCAAGGGACATAAGTTTACACCAAGATGGTTTGAT
TTTACTGAGGAAGTCACACCTACACCTTGGGGTGATTTGGAAGTCTACCAATATAATGGT
AAATACACCGAACATCGGGCTGCTGTAGATAGTTCTGGGGATATTGATAAGGATGACCAT
GCATCAATTGAATTTAACCCATGGCAGTATGGTAATTTGTCTGCAGAATGA

Peptide Sequence

PEP ID

VIT_06s0004g04930.t01
PEP Infomation

pep chromosome:12X:6:5891010:5899924:1 gene:VIT_06s0004g04930 transcript:VIT_06s0004g04930.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSPKKNESKGFFAAMTSGLSMFGNAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAQRGR
WKEEERDSYWKMMQKYIGSDVTSMVTLPVLIFEPMTMLQKMAELMEYSHLLDKADECEDP
YMRLVYASSWAISVYYAYQRTWKPFNPILGETYEMANHGGITFISEQVSHHPPMSAGHAE
NEHFTYEVTSKLKTKFLGNFLDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWVD
SPGEMIMSNMTTGDKAVLYFQPCGWFGAGRYEVDGYVYNAEEEPKILMTGKWNESMSYQP
CDIEGEPLTGTDLKEVWHVADVPEGDKFQYTHFAHKINSFDTAPRKLLASDSRLRPDRYA
LEKGDLSKAGAEKSSLEERQRAEKRNREAKGHKFTPRWFDFTEEVTPTPWGDLEVYQYNG
KYTEHRAAVDSSGDIDKDDHASIEFNPWQYGNLSAE

Transcript Sequence

Transcript ID

VIT_06s0004g04930.t01
Transcript Infomation

cdna chromosome:12X:6:5891010:5899924:1 gene:VIT_06s0004g04930 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTTTCCAGAACAGCCATCACTCTGTCGTCGACCCTTCAAAGAAAAAGAGCCGCGTCCCA
AAAAACGCTCGAAAACGCTCGAAATTCAGAACCGCCAACTATCTCCACCCTTCGTCGTCG
CACCTTTCTCTCCACCACTTTCTCTATCTGGGGTTTCAATTTCTCTCTAATTTCAATCAA
TCTTCTCTCGATTTTCCAGAAACTGTTTGGATCTTAGGAAGAGGAATCGAGTTAGAGGTC
AATTGCGATGGGCAGTCCCAAGAAGAACGAAAGTAAGGGCTTTTTCGCCGCAATGACTTC
CGGCTTGTCCATGTTCGGCAACGCCATGCACAGATCTGTCAACGGGTTGCTTGGTTATGA
AGGTGTGGAAGTTATAAACCCAGAGGGAGGCAAAGAAGATGCGGAAGAAGAAGCTCAAAG
AGGAAGATGGAAGGAGGAGGAAAGGGACAGTTACTGGAAGATGATGCAAAAGTATATAGG
TTCAGATGTCACCTCAATGGTGACACTTCCAGTTCTGATTTTTGAGCCAATGACAATGCT
TCAGAAAATGGCAGAATTAATGGAATACTCCCACCTGTTAGATAAAGCAGATGAATGCGA
GGATCCTTACATGCGATTGGTGTATGCTTCATCATGGGCTATATCTGTCTATTATGCCTA
CCAACGAACTTGGAAGCCTTTTAATCCCATTCTTGGTGAGACTTATGAAATGGCTAATCA
TGGTGGAATAACATTTATTTCAGAGCAAGTCAGCCATCATCCTCCGATGAGTGCTGGGCA
TGCTGAAAATGAGCATTTCACTTATGAAGTTACATCAAAATTAAAAACCAAATTTTTAGG
GAACTTCCTGGATGTCTATCCTGTTGGAAGAACACGTGTTACTCTAAAAAGAGATGGTGT
TGTCCTAGATTTGGTGCCACCTCCCACAAAGGTTAACAACCTGATTTTTGGACGGACATG
GGTTGATTCACCAGGGGAGATGATCATGTCCAATATGACAACCGGGGACAAGGCTGTGCT
ATATTTTCAACCATGTGGCTGGTTTGGGGCTGGTCGCTACGAAGTGGATGGATATGTGTA
TAATGCTGAGGAGGAACCCAAAATATTGATGACAGGGAAATGGAATGAGTCAATGAGTTA
CCAACCATGTGACATTGAAGGGGAGCCTCTTACAGGCACAGATCTGAAGGAGGTTTGGCA
TGTTGCTGATGTTCCTGAGGGCGACAAATTTCAGTACACTCATTTTGCACATAAAATAAA
CAGCTTTGACACAGCTCCTAGGAAGTTGTTGGCATCAGATTCTCGTTTGCGCCCTGATAG
ATATGCACTTGAAAAGGGAGATCTATCAAAAGCTGGTGCTGAAAAGAGCAGTTTGGAGGA
GAGGCAAAGAGCAGAAAAGAGAAACCGAGAGGCCAAGGGACATAAGTTTACACCAAGATG
GTTTGATTTTACTGAGGAAGTCACACCTACACCTTGGGGTGATTTGGAAGTCTACCAATA
TAATGGTAAATACACCGAACATCGGGCTGCTGTAGATAGTTCTGGGGATATTGATAAGGA
TGACCATGCATCAATTGAATTTAACCCATGGCAGTATGGTAATTTGTCTGCAGAATGAGG
TAATCCCGTTTTTAGGTTTGCTTGTGGGATTATGCAGTTGATTGGATATTTCGGCTTAAT
TTGGAAGCTGGTCTCTTTTGATGTGTGCATTGTATCCCTATTTGGTAATTTTATTGGGTG
ATCCAGTAAGTTTACAAGTTTATTATGGCTACATGGTTGACAACTTTGAATGA