Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g04610.t01
CDS Infomation

cds chromosome:12X:6:5587545:5589227:-1 gene:VIT_06s0004g04610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGCTTTACGCATTTCCCATTTTGCCCCTACTGCCATCGTTTATTTCCTCCTCTTG
TCTTCTTCTTATCCCATTGTTGCCCTCAACATCACCTCCCTCTTGTCCACGTACCCAGAT
CTCTCTGACTTCGCTAACCTACTCACCGCCACCGCCGTCGACGGCGATCTCATCCACCGC
TCTTCTCTCACCCTCCTCGCTGTCCCCAACTCCTTCCTCCGCTCCTCCGATCTCACCCAC
CGTTCCTCCGCCTCCAGTCTTGCCGACGTCATTCGCTACCACGTGCTTCTCCAGTACCTT
TCTTGGCCGGACATCCGTCAGATTCCGGCCGCCGGAAAGCTAATCACTACTCTCTACCAA
ACCACCGGCCGTGCCACTAGCAACTTCGGCTCCGTGAACATTACGCGCAACCCAGCAAAC
GGCGCTGTTTCGGTCCATTCTCCGGCGTCTTACTCTCCCTCCAACGCCACCATTCTTTCC
TTGATCAAGACGCTTCCGTACAATGTCAGCATCTTCACTGTGAATTCGCTGCTCGTTCCT
TACGGATTTGATCTGATGGCATCGGAGAGTCGACCGCCGTTGGGGTTGAACATCACGAAG
ACGTTAATCGACGGCCACAATTTCAACGTCGCGGCGTCGATGTTGATGGCGTCGGGGGTG
GTGGAGGAGTTCGAAGCGGATGAGGCTGGTGCCGGAATAACAATGTTTATCCCGACCGAC
GACGCATTCGCCGATCTTCCGACGACGGAGAGGCTACAGTCTCTTCCGGCGGACAAGAAG
GCGGTGGTCCTGAAGTTTCACGTCCTGCATTCATACTACACTCTGGGTTCGCTGGAGTCG
ATCGTGAACCCTGTTCAGCCCACATTGGCTACAGAGGAAATGGGAGCTGAGAGCTTCACT
CTCAACATTTCTAGGGTTAATGGGTCGGTGGCGATTGATTCAGGGATCGTACAAGCGTCG
GTGACCCAGACGGTATTCGATCAAAACCCAGTTGCTATTTTTGGGGTTTCCAAGGTACTC
TTGCCGAGAGAGATTTTCGGGAACAACCCAATTTCGACGACCAGGCCCAGCCCCAACAAT
GAAGCAACAGGCAGTGCTCAACCTCCGGACATATCCTTCTCGCCGGAGAATTCACCAGGT
TCGTATACACCCCCGTCGGGGATGTCCTCTCCACCGGGGTTCCACGAAGAGCTCCGATCA
GAAGCTCAAATTAACCGCGCCCAGAGGTTCATCCTCGCATGCGCAATGTCTTGTATAGGG
TTGTATGTAGTGGTATGA

Peptide Sequence

PEP ID

VIT_06s0004g04610.t01
PEP Infomation

pep chromosome:12X:6:5587545:5589227:-1 gene:VIT_06s0004g04610 transcript:VIT_06s0004g04610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAALRISHFAPTAIVYFLLLSSSYPIVALNITSLLSTYPDLSDFANLLTATAVDGDLIHR
SSLTLLAVPNSFLRSSDLTHRSSASSLADVIRYHVLLQYLSWPDIRQIPAAGKLITTLYQ
TTGRATSNFGSVNITRNPANGAVSVHSPASYSPSNATILSLIKTLPYNVSIFTVNSLLVP
YGFDLMASESRPPLGLNITKTLIDGHNFNVAASMLMASGVVEEFEADEAGAGITMFIPTD
DAFADLPTTERLQSLPADKKAVVLKFHVLHSYYTLGSLESIVNPVQPTLATEEMGAESFT
LNISRVNGSVAIDSGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGNNPISTTRPSPNN
EATGSAQPPDISFSPENSPGSYTPPSGMSSPPGFHEELRSEAQINRAQRFILACAMSCIG
LYVVV

Transcript Sequence

Transcript ID

VIT_06s0004g04610.t01
Transcript Infomation

cdna chromosome:12X:6:5587545:5589227:-1 gene:VIT_06s0004g04610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCACACTCTCCTCTCCTCTCTTTCTTCTAGGCTCTCTTACTCAGACTACACTTGCAG
GGGAAAAATGGCCGCTTTACGCATTTCCCATTTTGCCCCTACTGCCATCGTTTATTTCCT
CCTCTTGTCTTCTTCTTATCCCATTGTTGCCCTCAACATCACCTCCCTCTTGTCCACGTA
CCCAGATCTCTCTGACTTCGCTAACCTACTCACCGCCACCGCCGTCGACGGCGATCTCAT
CCACCGCTCTTCTCTCACCCTCCTCGCTGTCCCCAACTCCTTCCTCCGCTCCTCCGATCT
CACCCACCGTTCCTCCGCCTCCAGTCTTGCCGACGTCATTCGCTACCACGTGCTTCTCCA
GTACCTTTCTTGGCCGGACATCCGTCAGATTCCGGCCGCCGGAAAGCTAATCACTACTCT
CTACCAAACCACCGGCCGTGCCACTAGCAACTTCGGCTCCGTGAACATTACGCGCAACCC
AGCAAACGGCGCTGTTTCGGTCCATTCTCCGGCGTCTTACTCTCCCTCCAACGCCACCAT
TCTTTCCTTGATCAAGACGCTTCCGTACAATGTCAGCATCTTCACTGTGAATTCGCTGCT
CGTTCCTTACGGATTTGATCTGATGGCATCGGAGAGTCGACCGCCGTTGGGGTTGAACAT
CACGAAGACGTTAATCGACGGCCACAATTTCAACGTCGCGGCGTCGATGTTGATGGCGTC
GGGGGTGGTGGAGGAGTTCGAAGCGGATGAGGCTGGTGCCGGAATAACAATGTTTATCCC
GACCGACGACGCATTCGCCGATCTTCCGACGACGGAGAGGCTACAGTCTCTTCCGGCGGA
CAAGAAGGCGGTGGTCCTGAAGTTTCACGTCCTGCATTCATACTACACTCTGGGTTCGCT
GGAGTCGATCGTGAACCCTGTTCAGCCCACATTGGCTACAGAGGAAATGGGAGCTGAGAG
CTTCACTCTCAACATTTCTAGGGTTAATGGGTCGGTGGCGATTGATTCAGGGATCGTACA
AGCGTCGGTGACCCAGACGGTATTCGATCAAAACCCAGTTGCTATTTTTGGGGTTTCCAA
GGTACTCTTGCCGAGAGAGATTTTCGGGAACAACCCAATTTCGACGACCAGGCCCAGCCC
CAACAATGAAGCAACAGGCAGTGCTCAACCTCCGGACATATCCTTCTCGCCGGAGAATTC
ACCAGGTTCGTATACACCCCCGTCGGGGATGTCCTCTCCACCGGGGTTCCACGAAGAGCT
CCGATCAGAAGCTCAAATTAACCGCGCCCAGAGGTTCATCCTCGCATGCGCAATGTCTTG
TATAGGGTTGTATGTAGTGGTATGAGATTCGATTATTTTTCCTCATAATTATCAATTTAT
TTTTTCCTTTTTCGGGGGTTTTTGTTTTTTGGTTCTTTTTTTCACACGATGAATTGAATT
TGGCTACAAAGGCAGCCAATTTTTCTTCTGGGCTCGTCAATTCTGTTTATCTGGGAATAA
TTTTCCACTAAAAGGCACAATTTTTTATTTTCCTCTTTTGGGGTTCTTTGTGAATCTGCT
GTTGTTCTCGTGATGTAAAGAGCTTAAGATCATTCTGTTGTATGAGTGAAAGTAGAAGAT
GGGTTTAGATCAGTCTCTGTTTTCTTCTTTTGGTAATACCATTTCCTTTTCCTTTCTGCA
TTA