Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g04600.t01
CDS Infomation

cds chromosome:12X:6:5570912:5573902:-1 gene:VIT_06s0004g04600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTAACGGTTTCGCGAAGCTAAGCATCTGCTTCACCGGCGAGGGAGGAGCTCGCCGG
AGGCAGGATATATCTGTTTTGATATCGGACCCTCTTGATGAAGGTTTGGGTCACTCTTTC
TGCTACATCAGACCTGACCAGTCTCGGCTCTCATCTTCCAAGGTTCACTCTGAAGAAACC
ACCACCTTCCGATCAATCTCAGGCGCTTCTGTAAGTGCCAACACATCAACTCCTCTCTCT
ACAGCCTTTGTAGATCTCTATTCTTACAATAGTATTGATCGAGCCTCGGCTTTCGAGAGC
TCAACGTCGTTTACTTCCATTCCTCTGCAACCAATTCCCCGAAATTGGATGAATTCTGGC
CCAATACCGGGAAGTTACGGCGGAATTCCGGGTTCTGGACCCCTTGAGAGAGGGTTTTTA
TCGGGGCCGATTGAGAGAGGGTTCATGTCAGGACCGATTGATCGGGGGTTGTTTTCAGGT
CCTCTTGAAAAGAGCAGTACTGATCAGTTTCAGAGGAGTTATTCTCATGGTGGGTTTGCT
TTTAGACCCAGATCGAGGAAAGGGTCACTGATTCGTGTTCTTCAGAGAGCAATATCTAAG
ACGATATCGCGTGGCCAGAACTCGATTGTGGCTCCAATTAAAGGCGTTGTTTCGGTAAAA
GAACCGGATTGGCTTGTTGGGTCGGAAAAGCACAATGAGAATCTCACTGTGAGTAGTGTG
AATTTGAGCAGTGATGGGAGTTTGGAGGATGATGATTCGCTAGAGAGTCAGAATCTTCAA
TGGGCTCAAGGGAAAGCAGGGGAGGATCGAGTTCATGTCGTGGTTTCGGAGGAGCATGGC
TGGGTTTTTGTAGGGATTTATGATGGATTCAACGGCCCTGATGCACCTGATTATTTATTA
TCCAATTTATACTCTGCTGTTCACAAGGAGCTCAAGGGTTTGTTATGGGATGACAAGCAT
GAATCCAATCCAGTTGCAGCCCCTGCCTCCTCCCCTGTTCCTTCAGAAGCTTCCAATTCA
GAACTGGAAGATTCACATCTTGGTTCTGATGTTGATTTAGCTAGAAATAGGATGGTGGAT
GGTTGTTCTCATTGTTCTTATCAAGAGTATTATCCATCGGGGAGTGGGGATGTGAAGTTC
GATTCAAATTCAAAGAGAAAGAAGGGTAAGAATTCGAAGAACAAGTACAAGGGTGCAGCA
AAGAAATGGGAGGAGAATCAGAGGAGGTGGAAGTGTGAGTGGGACAGGGAGAGATTAGAG
CTCGATCGAAGGTTAAAGGAGCAATTGAATGGATCTAATACCGATGGCTCGAGATCTATT
AACCATTCAGATGTATTGAAAGCTCTGTCTCAAGCCTTGAGAAAAACAGAGGAGTCGTAT
TTGGAAATAGCTGATAAGATGGTTATGGAAAATCCGGAGCTGGCCCTCATGGGATCTTGT
GTTCTTGTAATGCTGATGAAGGGGGAGGATGTTTATGTGATGAATGTGGGTGATAGTCGA
GCAGTTTTAGCTCAGAAGGCGGAGGCTGATGTCTGGCTTGGGAAGATCCGGCAGGACTTG
GAAAGGATCAATGAAGAAACATTGCATGATCTTGAAGCGATGGACAATGATAACTCCAAC
ATGATTCCTACTTTATCTGCTTTTCAGCTTACTGTGGACCACAGCACCAGTGTGGAGGAG
GAAGTTCGGAGAATAAAAAATGAACACCCTGATGATGCTTGTGCAGTGATGAATGATCGT
GTGAAAGGTTCATTGAAAGTCACTCGAGCTTTTGGGGCGGGTTTTCTCAAACAGCCTAAA
TGGAACAATGCACTTCTAGAGATGTTCAGAATAGACTATGTTGGCACCTCTCCATACATC
AGCTGTCTCCCATCTCTTTACCACCACAGATTAGGCCCAGAAGATAGGTTTTTGATATTA
TCATCTGATGGTTTATATCAATACTTGACAAATGAAGAGGCTGTTTCTGAAGTTGAACTT
TTCATCGCATTATCCCCTGATGGAGATCCTGCACAGCATCTGGTCGAGGAAGTGCTGTTT
CGTGCAGCAAAAAAAGCTGGTATGGACTTCCATGAGCTGCTTGAAATACCACAAGGGGAT
AGACGACGGTACCATGATGATGTTTCGATTATTGTTATTTCATTGGAGGGCATGATATGG
AGATCATGTGTATAA

Peptide Sequence

PEP ID

VIT_06s0004g04600.t01
PEP Infomation

pep chromosome:12X:6:5570912:5573902:-1 gene:VIT_06s0004g04600 transcript:VIT_06s0004g04600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGNGFAKLSICFTGEGGARRRQDISVLISDPLDEGLGHSFCYIRPDQSRLSSSKVHSEET
TTFRSISGASVSANTSTPLSTAFVDLYSYNSIDRASAFESSTSFTSIPLQPIPRNWMNSG
PIPGSYGGIPGSGPLERGFLSGPIERGFMSGPIDRGLFSGPLEKSSTDQFQRSYSHGGFA
FRPRSRKGSLIRVLQRAISKTISRGQNSIVAPIKGVVSVKEPDWLVGSEKHNENLTVSSV
NLSSDGSLEDDDSLESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLL
SNLYSAVHKELKGLLWDDKHESNPVAAPASSPVPSEASNSELEDSHLGSDVDLARNRMVD
GCSHCSYQEYYPSGSGDVKFDSNSKRKKGKNSKNKYKGAAKKWEENQRRWKCEWDRERLE
LDRRLKEQLNGSNTDGSRSINHSDVLKALSQALRKTEESYLEIADKMVMENPELALMGSC
VLVMLMKGEDVYVMNVGDSRAVLAQKAEADVWLGKIRQDLERINEETLHDLEAMDNDNSN
MIPTLSAFQLTVDHSTSVEEEVRRIKNEHPDDACAVMNDRVKGSLKVTRAFGAGFLKQPK
WNNALLEMFRIDYVGTSPYISCLPSLYHHRLGPEDRFLILSSDGLYQYLTNEEAVSEVEL
FIALSPDGDPAQHLVEEVLFRAAKKAGMDFHELLEIPQGDRRRYHDDVSIIVISLEGMIW
RSCV

Transcript Sequence

Transcript ID

VIT_06s0004g04600.t01
Transcript Infomation

cdna chromosome:12X:6:5570912:5573902:-1 gene:VIT_06s0004g04600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCGATGGGTAACGGTTTCGCGAAGCTAAGCATCTGCTTCACCGGCGAGGGAGGAGCTCGC
CGGAGGCAGGATATATCTGTTTTGATATCGGACCCTCTTGATGAAGGTTTGGGTCACTCT
TTCTGCTACATCAGACCTGACCAGTCTCGGCTCTCATCTTCCAAGGTTCACTCTGAAGAA
ACCACCACCTTCCGATCAATCTCAGGCGCTTCTGTAAGTGCCAACACATCAACTCCTCTC
TCTACAGCCTTTGTAGATCTCTATTCTTACAATAGTATTGATCGAGCCTCGGCTTTCGAG
AGCTCAACGTCGTTTACTTCCATTCCTCTGCAACCAATTCCCCGAAATTGGATGAATTCT
GGCCCAATACCGGGAAGTTACGGCGGAATTCCGGGTTCTGGACCCCTTGAGAGAGGGTTT
TTATCGGGGCCGATTGAGAGAGGGTTCATGTCAGGACCGATTGATCGGGGGTTGTTTTCA
GGTCCTCTTGAAAAGAGCAGTACTGATCAGTTTCAGAGGAGTTATTCTCATGGTGGGTTT
GCTTTTAGACCCAGATCGAGGAAAGGGTCACTGATTCGTGTTCTTCAGAGAGCAATATCT
AAGACGATATCGCGTGGCCAGAACTCGATTGTGGCTCCAATTAAAGGCGTTGTTTCGGTA
AAAGAACCGGATTGGCTTGTTGGGTCGGAAAAGCACAATGAGAATCTCACTGTGAGTAGT
GTGAATTTGAGCAGTGATGGGAGTTTGGAGGATGATGATTCGCTAGAGAGTCAGAATCTT
CAATGGGCTCAAGGGAAAGCAGGGGAGGATCGAGTTCATGTCGTGGTTTCGGAGGAGCAT
GGCTGGGTTTTTGTAGGGATTTATGATGGATTCAACGGCCCTGATGCACCTGATTATTTA
TTATCCAATTTATACTCTGCTGTTCACAAGGAGCTCAAGGGTTTGTTATGGGATGACAAG
CATGAATCCAATCCAGTTGCAGCCCCTGCCTCCTCCCCTGTTCCTTCAGAAGCTTCCAAT
TCAGAACTGGAAGATTCACATCTTGGTTCTGATGTTGATTTAGCTAGAAATAGGATGGTG
GATGGTTGTTCTCATTGTTCTTATCAAGAGTATTATCCATCGGGGAGTGGGGATGTGAAG
TTCGATTCAAATTCAAAGAGAAAGAAGGGTAAGAATTCGAAGAACAAGTACAAGGGTGCA
GCAAAGAAATGGGAGGAGAATCAGAGGAGGTGGAAGTGTGAGTGGGACAGGGAGAGATTA
GAGCTCGATCGAAGGTTAAAGGAGCAATTGAATGGATCTAATACCGATGGCTCGAGATCT
ATTAACCATTCAGATGTATTGAAAGCTCTGTCTCAAGCCTTGAGAAAAACAGAGGAGTCG
TATTTGGAAATAGCTGATAAGATGGTTATGGAAAATCCGGAGCTGGCCCTCATGGGATCT
TGTGTTCTTGTAATGCTGATGAAGGGGGAGGATGTTTATGTGATGAATGTGGGTGATAGT
CGAGCAGTTTTAGCTCAGAAGGCGGAGGCTGATGTCTGGCTTGGGAAGATCCGGCAGGAC
TTGGAAAGGATCAATGAAGAAACATTGCATGATCTTGAAGCGATGGACAATGATAACTCC
AACATGATTCCTACTTTATCTGCTTTTCAGCTTACTGTGGACCACAGCACCAGTGTGGAG
GAGGAAGTTCGGAGAATAAAAAATGAACACCCTGATGATGCTTGTGCAGTGATGAATGAT
CGTGTGAAAGGTTCATTGAAAGTCACTCGAGCTTTTGGGGCGGGTTTTCTCAAACAGCCT
AAATGGAACAATGCACTTCTAGAGATGTTCAGAATAGACTATGTTGGCACCTCTCCATAC
ATCAGCTGTCTCCCATCTCTTTACCACCACAGATTAGGCCCAGAAGATAGGTTTTTGATA
TTATCATCTGATGGTTTATATCAATACTTGACAAATGAAGAGGCTGTTTCTGAAGTTGAA
CTTTTCATCGCATTATCCCCTGATGGAGATCCTGCACAGCATCTGGTCGAGGAAGTGCTG
TTTCGTGCAGCAAAAAAAGCTGGTATGGACTTCCATGAGCTGCTTGAAATACCACAAGGG
GATAGACGACGGTACCATGATGATGTTTCGATTATTGTTATTTCATTGGAGGGCATGATA
TGGAGATCATGTGTATAAGTAAAGAAAACCACAGATAGAAGTTATAGAGACGTCGGTTTA
AAAAAGTCGGGCATTTCCGTTTTGGCTGTGTTTTTTTCCTTGTCACCTTTGTATTATACC
AATTAAGCTCCCTGGACAGTCTGGAGAGTTGGCTGTGTGATCTACTGGGTGGTAAGGTGT
GTAAAGGCGTACAAA