Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g04590.t01
CDS Infomation

cds chromosome:12X:6:5564299:5566010:-1 gene:VIT_06s0004g04590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAAGCTTGGGCGGCAACAGTGGTGGCAGGAACATGGGTGCACCCTTTTTCCATGAG
TTCAAGAAACAGGCTTCTTTCTTCTTCAAGGAGAAGATCAAGACTGCTAGATTGGCTCTT
ACGGATGTTACACCTGCACAACTGTTGACGGAGGAGGTCACTGGTGGGAATCCTTGGTCT
GCGGACACGAGAACCATGGGCTTGATATCGAGGGCGGCCTTTGAAGTGGATGATTATGGG
AGAATTGTGGAGATTCTGCACAACAGATTGTTGAGATTTGATAGGAAGAATTGGAGGGCC
TTTTACAATTCTCTGATCCTCCTTGAGCACCTGCTGACTCATGGGCCAGAGAGTGTTGCA
GGCGAGTTTCAGAGTGAGAAAGGTGTCATTGAGGAGATGGGAAGTTTTCAGTACATAGAT
GAGAAAGGATTCAACTGGGGCCTGACTGTTAGGAAGAAATCTGAGAGGGTATTGAAGTTG
CTCCAGAAAGGGCCTCTTCTCAAGGAAGAAAGGAACCGAGCTAGAAAGCTAACGAGAGGG
ATTAAAGGCTTCGGGAGCTTCACCCAGAAGTCTTCCTCAGCGCAAGGAATTTTGCGTGAA
TCATCCTTCCATGGAAGGTGTACTTCACATTTAAGTGATGATGAAAATCAGTTAACCAGT
GATGAAGGCTCAACCAGAAGAGGGGTTGGAAAATCACAGCAAACACAAGAAGATAATGCC
ATACTGGCTGTTGGCGAGAAAGCTGAGAATTCTAACACCTGGGGTAGTTTTAGTAATGGA
GACATACTCAAGAAATGCGAAAACCAAACTAGTTTCAAAGAGAACATGGTACTTGTAGTG
AGAGACCTACATGAATGGAGTTGCACAGGGGAGTCTAAGCCTCTTTTGGATGGTAACAGA
AATGAGCCAAGGACAGCAGTTTCTGTGGATGAAGATCACCCCTTCAATCACGCTGAGAAT
CAAACCACAGCATCACTGCTTTCAACCAGAAATGAAATCCTGCAAGGATGCTGA

Peptide Sequence

PEP ID

VIT_06s0004g04590.t01
PEP Infomation

pep chromosome:12X:6:5564299:5566010:-1 gene:VIT_06s0004g04590 transcript:VIT_06s0004g04590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSLGGNSGGRNMGAPFFHEFKKQASFFFKEKIKTARLALTDVTPAQLLTEEVTGGNPWS
ADTRTMGLISRAAFEVDDYGRIVEILHNRLLRFDRKNWRAFYNSLILLEHLLTHGPESVA
GEFQSEKGVIEEMGSFQYIDEKGFNWGLTVRKKSERVLKLLQKGPLLKEERNRARKLTRG
IKGFGSFTQKSSSAQGILRESSFHGRCTSHLSDDENQLTSDEGSTRRGVGKSQQTQEDNA
ILAVGEKAENSNTWGSFSNGDILKKCENQTSFKENMVLVVRDLHEWSCTGESKPLLDGNR
NEPRTAVSVDEDHPFNHAENQTTASLLSTRNEILQGC

Transcript Sequence

Transcript ID

VIT_06s0004g04590.t01
Transcript Infomation

cdna chromosome:12X:6:5564299:5566010:-1 gene:VIT_06s0004g04590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTTCTTCTTCTCATTACATCTGCAAATCCTCACTCCTTTTATTTTTTTCTGATATAAA
AGAGAGTAGTTCAGAGATGTCAAGCTTGGGCGGCAACAGTGGTGGCAGGAACATGGGTGC
ACCCTTTTTCCATGAGTTCAAGAAACAGGCTTCTTTCTTCTTCAAGGAGAAGATCAAGAC
TGCTAGATTGGCTCTTACGGATGTTACACCTGCACAACTGTTGACGGAGGAGGTCACTGG
TGGGAATCCTTGGTCTGCGGACACGAGAACCATGGGCTTGATATCGAGGGCGGCCTTTGA
AGTGGATGATTATGGGAGAATTGTGGAGATTCTGCACAACAGATTGTTGAGATTTGATAG
GAAGAATTGGAGGGCCTTTTACAATTCTCTGATCCTCCTTGAGCACCTGCTGACTCATGG
GCCAGAGAGTGTTGCAGGCGAGTTTCAGAGTGAGAAAGGTGTCATTGAGGAGATGGGAAG
TTTTCAGTACATAGATGAGAAAGGATTCAACTGGGGCCTGACTGTTAGGAAGAAATCTGA
GAGGGTATTGAAGTTGCTCCAGAAAGGGCCTCTTCTCAAGGAAGAAAGGAACCGAGCTAG
AAAGCTAACGAGAGGGATTAAAGGCTTCGGGAGCTTCACCCAGAAGTCTTCCTCAGCGCA
AGGAATTTTGCGTGAATCATCCTTCCATGGAAGGTGTACTTCACATTTAAGTGATGATGA
AAATCAGTTAACCAGTGATGAAGGCTCAACCAGAAGAGGGGTTGGAAAATCACAGCAAAC
ACAAGAAGATAATGCCATACTGGCTGTTGGCGAGAAAGCTGAGAATTCTAACACCTGGGG
TAGTTTTAGTAATGGAGACATACTCAAGAAATGCGAAAACCAAACTAGTTTCAAAGAGAA
CATGGTACTTGTAGTGAGAGACCTACATGAATGGAGTTGCACAGGGGAGTCTAAGCCTCT
TTTGGATGGTAACAGAAATGAGCCAAGGACAGCAGTTTCTGTGGATGAAGATCACCCCTT
CAATCACGCTGAGAATCAAACCACAGCATCACTGCTTTCAACCAGAAATGAAATCCTGCA
AGGATGCTGAGGAACTAGATTATGGTATATACAAGTGAAGTCTGCAAGCCTCTTCATCAT
ACATAGAAGAGCCAAGGTTCTGTTTTGCCTGTGGTCCTATGTGGGCTTTGAAGGATACAT
TCTATAGAGGAGAATGGCATTGAAAGCTTGCAGGGATGTCGAGGAACTAGATTATAGCAT
ACATGACTGAAGTTGTCTGCAAGCTACTTTACCATATGGACAAGCGTTCTGT