Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g04560.t01
CDS Infomation

cds chromosome:12X:6:5522383:5528575:-1 gene:VIT_06s0004g04560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCAGCAGGAAGAGGGTTGGCCTCTGGGTTTGCAACCACTGAATGTGAGAATTGGG
TTGGCAAGAATTGGTGATTTTTCTGGATCAATTTCATTCAACACTTTACTCACAGGCTCT
CCAAGTTCCTCCACAGATTCTTCATCAGATTTGGACACAGAGTCCACAGGGTCTTTCTTC
CATGACAAGAGCATCACGCTTGGGAGCCTGATAGGTGTCTCCAGCATTATAGAGCTCACT
GGAAGATCAGTAAGGGGAAGAAGAGCAGAAAGTTTAAAAGGCAAGAGAAGCTACAAGTCC
AGAACATGGTTTTTCTCTTTATGCTCAAGGGCTAGCACTGATGCAGAGAATGTGAAGAAC
CCTCCCTCCCTTGGCCACTTTCTTGCAGTGGAAAGGAGAGCTGCCAATGAATATAGAAGG
AACCATAGCCCTATCGATTATGGACCGGATGAGCTTGCCCTGGCTCAGCCTAATGCAGAA
CCAAACTCACTATTCATGGATGGAGAAATTGCACCTCCTCAGCCAAGTTCATGGTCAGGT
TCAGATGCTGAGATGGGACAAAACAGAGGACTAGTGAATGGCAGTGGGCATGGAGTGCCA
GTGCTGTTTTCATGCATGGTGGAGTGGAGTGGAACGGTCAAACCCCAGAGAACCATTCAT
CTTCACTCCTCCGTTTTCCAAGTTGGGGGTGTTGTGACTTATGACTTGTGA

Peptide Sequence

PEP ID

VIT_06s0004g04560.t01
PEP Infomation

pep chromosome:12X:6:5522383:5528575:-1 gene:VIT_06s0004g04560 transcript:VIT_06s0004g04560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAQQEEGWPLGLQPLNVRIGLARIGDFSGSISFNTLLTGSPSSSTDSSSDLDTESTGSFF
HDKSITLGSLIGVSSIIELTGRSVRGRRAESLKGKRSYKSRTWFFSLCSRASTDAENVKN
PPSLGHFLAVERRAANEYRRNHSPIDYGPDELALAQPNAEPNSLFMDGEIAPPQPSSWSG
SDAEMGQNRGLVNGSGHGVPVLFSCMVEWSGTVKPQRTIHLHSSVFQVGGVVTYDL

Transcript Sequence

Transcript ID

VIT_06s0004g04560.t01
Transcript Infomation

cdna chromosome:12X:6:5522383:5528575:-1 gene:VIT_06s0004g04560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGGTATCTTGTTCATCCTCTCAATATAATCTTATCTCTCTGCAGCTTCTTTTACAGAG
TAGAGAACACCAAGGAAATGACAGTTACGTGTCTCTCTACTCACCTGAGGTGACTTGTTT
TACTATAATCAATCAACATACTACACACCCTAGTGCTCGACTATTTGGCAGTAATGGCTC
AGCAGGAAGAGGGTTGGCCTCTGGGTTTGCAACCACTGAATGTGAGAATTGGGTTGGCAA
GAATTGGTGATTTTTCTGGATCAATTTCATTCAACACTTTACTCACAGGCTCTCCAAGTT
CCTCCACAGATTCTTCATCAGATTTGGACACAGAGTCCACAGGGTCTTTCTTCCATGACA
AGAGCATCACGCTTGGGAGCCTGATAGGTGTCTCCAGCATTATAGAGCTCACTGGAAGAT
CAGTAAGGGGAAGAAGAGCAGAAAGTTTAAAAGGCAAGAGAAGCTACAAGTCCAGAACAT
GGTTTTTCTCTTTATGCTCAAGGGCTAGCACTGATGCAGAGAATGTGAAGAACCCTCCCT
CCCTTGGCCACTTTCTTGCAGTGGAAAGGAGAGCTGCCAATGAATATAGAAGGAACCATA
GCCCTATCGATTATGGACCGGATGAGCTTGCCCTGGCTCAGCCTAATGCAGAACCAAACT
CACTATTCATGGATGGAGAAATTGCACCTCCTCAGCCAAGTTCATGGTCAGGTTCAGATG
CTGAGATGGGACAAAACAGAGGACTAGTGAATGGCAGTGGGCATGGAGTGCCAGTGCTGT
TTTCATGCATGGTGGAGTGGAGTGGAACGGTCAAACCCCAGAGAACCATTCATCTTCACT
CCTCCGTTTTCCAAGTTGGGGGTGTTGTGACTTATGACTTGTGACTTGTAACAGTGTAGC
AGCCATTGAAGAATGTTGAATTTTCCTTTGAAAAGAGAAAAAGAATGCTTACTATTCAGG
TAAACTAACAAGAGGCCCCCCTTCTCTCCCTCAAGTTCACCACTGCTCCTTCAATCTCAA
GAAAGAAAGAAAGAAAAATGAAATGGAATTACAATAATATGACCCCACATCACCAAAACT
TACCAACCGACGCCCGCAACTCACCTCTTGCTTATTTCCCAAATTTACATAGCAGATGGA
GCTCTATCTATATATACGGAATGGGTCCAGGGCCTGCACCCGAATCTTTCATTTTCCTCC
CTTTTTTTTTGGATATCAGGGCCGCCAATTATTGATTGCCGGATGGTCTCCTTGGTTAGG
AAATGCCATGCAGTATCAAGGCTTATCGATCCACTCATTTTCTGCAGCAATTCTACCAGA
GCCCCGGCCACCCATTTTGCTGAAGGAGCCCACTGCTGATAAGCCCTTGAAGCTGCTGCT
TCCC