Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_06s0004g04530.t01
CDS Infomation	cds chromosome:12X:6:5497964:5504059:-1 gene:VIT_06s0004g04530 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6GV22]
Sequence	ATGGAAGAAGCAAAAGGAGCTCCAGTACAGGAGCTGATCGATACAGTTAGTAAGATATCG TCAATCTCAGATTACAGATGTACGGTCAGGAAAGAGTATTGTAATCTGGCAAGAAGGTTG AAGCTGTTGATTCCAATGTTTGAAGAGATTCGGGACAGTAAAGAGCCGATTCCAGAGGAG TCGTTGAAAGCCCTAGTCTCGTTGAAGGAGGCTCTGGAGTCAGCTAAAGAGTTGCTCAGA TTTGGTAGTGAAGGGAGCAAGATTTTCATGGTCCTAGAAAGAGAGCAAGTTGTCTCCAAA TTCCACGAAGTGACTGCTAATCTGGAACAAGCTTTGAGCGGAATCTCATTTGAAAAACTT GACATAACAGACGAAGTTAAGGAACAGGTTGAGCTAGTTCTCTCTCAGTTCAGAAGAGCC AAAGGAAGGGCTGATGCAACTGATGCTGAGCTGTATGAGGATCTTGTGTCCCTTTATAAC AAGAGCACTGATGCAGCTACAGACCCAGCTGTCTTAAGGAGGTTGGCTGAGAAGTTGCAA TTAATGCAAATAGATGATCTCACACAAGAATCACTGGCTCTGCATGAAATGGTCACTGCC AGCAGTGCAGATCCTGGAGAGAGCATCGAGAAGATGTCAATGCTATTGAAGAAAATTAAG GATTTTGTGCAGACTGAAAATCCAGACTTGACTGCTACACATGGAAAGTCCCTTCCTTCA AGTTGCAGCGGGCAAATATCTACCGATGGGAATCACAAGTCCCCAGTTATTCCAGATGAT TTTCGTTGTCCGATATCCCTGGAGCTAATGAACGATCCTGTCATTGTTTCAACAGGGCAG ACCTATGAACGTTCCTGCATCGAGAAATGGCTGGAAGCAGGACATGGCACATGTCCAAAG ACACAACAGACCCTCTCTAGCCAGGCCCTCACACCAAACTATGTCTTGCGTAGCCTCATA GCACAGTGGTGCGAGTCTAATGGGATCGAGCCACCAAAAAGACCCAGCAGTTCTCGGCCC AGTAAAACTGCATCTTCCTGCTCACCAGCTGAGCGCACCAACATAGAAATTCTTCTCAAC AAGCTTCGATCTGGCAGCCCTGAAGACCAGCGAAATGCAGCAGGTGAGATCCGCCTTCTT GCTAAGCGCAATGCAGATAATCGAGTGGCCATTGCCGAAGCGGGGGCCATCCCTCTCCTG GTCAACCTCCTTGCAACACCTGATTCCCGCACCCAAGAGCATGCTGTCACAGCGCTTCTT AACCTTTCCATATGTGAAGATAACAAATCAAGCATTATTAACTCTGGAGCTGTACCTGGT ATAGTTTATGTGCTCAAGAGGGGGAGCATGGAAGCACGGGAAAATGCTGCAGCTACCCTC TTTAGCCTTTCGGTGGTGGATGAGAATAAGGTTACAATTGGTGCTTCAGGGGCAATCCCA CCACTGGTGACATTGTTAAGTGAAGGTACCCAGAGGGGGAAGAAGGATGCTGCAACCGCA CTGTTCAACTTGTGTATTTACCAAGGGAACAAGGGAAAGGCAGTGAGAGCTGGAGTAGTG CCCACACTGATGCGGCTGCTGACAGAACCTGGAGGTGGAATGGTGGATGAGGCACTGGCT ATACTTGCAATCTTAGCCAGCCATCCTGAAGGGAAGGCAGCCATTGGATCCTCCGAGGCA GTGCCAGTTTTGGTGGAGGTTATTGGCAACGGGTCCCCCAGGAACAGAGAAAATGCAGCT GCAGTTTTGGTGCATCTTTGTGCTGGTGACCAACATCATCTAGCGGAAGCTCAGGAGCTT GGAGTGATGGGTCCATTGGTGGATCTGGCTCAAAATGGCACCGATAGGGGCAAGCGAAAG GCTGCACAGTTGCTTGAGCGCATGGGCAGGTTTATTGAACAGCAGCAGCAACAGCAGGCT CTGGTGCAAGCTCAGGCTCAAGCTCAGGCTCAGGCTCAGGCTCAGGCCCAGCCCCAGGCA CATACCCACACCCACACAGAGAGCCCGCACACACAGCTGTCCACGCTAATGAATGCTGTT GATGGCTGA

Peptide Sequence

PEP ID	VIT_06s0004g04530.t01
PEP Infomation	pep chromosome:12X:6:5497964:5504059:-1 gene:VIT_06s0004g04530 transcript:VIT_06s0004g04530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6GV22]
Sequence	MEEAKGAPVQELIDTVSKISSISDYRCTVRKEYCNLARRLKLLIPMFEEIRDSKEPIPEE SLKALVSLKEALESAKELLRFGSEGSKIFMVLEREQVVSKFHEVTANLEQALSGISFEKL DITDEVKEQVELVLSQFRRAKGRADATDAELYEDLVSLYNKSTDAATDPAVLRRLAEKLQ LMQIDDLTQESLALHEMVTASSADPGESIEKMSMLLKKIKDFVQTENPDLTATHGKSLPS SCSGQISTDGNHKSPVIPDDFRCPISLELMNDPVIVSTGQTYERSCIEKWLEAGHGTCPK TQQTLSSQALTPNYVLRSLIAQWCESNGIEPPKRPSSSRPSKTASSCSPAERTNIEILLN KLRSGSPEDQRNAAGEIRLLAKRNADNRVAIAEAGAIPLLVNLLATPDSRTQEHAVTALL NLSICEDNKSSIINSGAVPGIVYVLKRGSMEARENAAATLFSLSVVDENKVTIGASGAIP PLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALA ILAILASHPEGKAAIGSSEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQHHLAEAQEL GVMGPLVDLAQNGTDRGKRKAAQLLERMGRFIEQQQQQQALVQAQAQAQAQAQAQAQPQA HTHTHTESPHTQLSTLMNAVDG

Transcript Sequence

Transcript ID	VIT_06s0004g04530.t01
Transcript Infomation	cdna chromosome:12X:6:5497964:5504059:-1 gene:VIT_06s0004g04530 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6GV22]
Sequence	AGTTAGATCTCTCATCTGAAGCCATGGAAGAAGCAAAAGGAGCTCCAGTACAGGAGCTGA TCGATACAGTTAGTAAGATATCGTCAATCTCAGATTACAGATGTACGGTCAGGAAAGAGT ATTGTAATCTGGCAAGAAGGTTGAAGCTGTTGATTCCAATGTTTGAAGAGATTCGGGACA GTAAAGAGCCGATTCCAGAGGAGTCGTTGAAAGCCCTAGTCTCGTTGAAGGAGGCTCTGG AGTCAGCTAAAGAGTTGCTCAGATTTGGTAGTGAAGGGAGCAAGATTTTCATGGTCCTAG AAAGAGAGCAAGTTGTCTCCAAATTCCACGAAGTGACTGCTAATCTGGAACAAGCTTTGA GCGGAATCTCATTTGAAAAACTTGACATAACAGACGAAGTTAAGGAACAGGTTGAGCTAG TTCTCTCTCAGTTCAGAAGAGCCAAAGGAAGGGCTGATGCAACTGATGCTGAGCTGTATG AGGATCTTGTGTCCCTTTATAACAAGAGCACTGATGCAGCTACAGACCCAGCTGTCTTAA GGAGGTTGGCTGAGAAGTTGCAATTAATGCAAATAGATGATCTCACACAAGAATCACTGG CTCTGCATGAAATGGTCACTGCCAGCAGTGCAGATCCTGGAGAGAGCATCGAGAAGATGT CAATGCTATTGAAGAAAATTAAGGATTTTGTGCAGACTGAAAATCCAGACTTGACTGCTA CACATGGAAAGTCCCTTCCTTCAAGTTGCAGCGGGCAAATATCTACCGATGGGAATCACA AGTCCCCAGTTATTCCAGATGATTTTCGTTGTCCGATATCCCTGGAGCTAATGAACGATC CTGTCATTGTTTCAACAGGGCAGACCTATGAACGTTCCTGCATCGAGAAATGGCTGGAAG CAGGACATGGCACATGTCCAAAGACACAACAGACCCTCTCTAGCCAGGCCCTCACACCAA ACTATGTCTTGCGTAGCCTCATAGCACAGTGGTGCGAGTCTAATGGGATCGAGCCACCAA AAAGACCCAGCAGTTCTCGGCCCAGTAAAACTGCATCTTCCTGCTCACCAGCTGAGCGCA CCAACATAGAAATTCTTCTCAACAAGCTTCGATCTGGCAGCCCTGAAGACCAGCGAAATG CAGCAGGTGAGATCCGCCTTCTTGCTAAGCGCAATGCAGATAATCGAGTGGCCATTGCCG AAGCGGGGGCCATCCCTCTCCTGGTCAACCTCCTTGCAACACCTGATTCCCGCACCCAAG AGCATGCTGTCACAGCGCTTCTTAACCTTTCCATATGTGAAGATAACAAATCAAGCATTA TTAACTCTGGAGCTGTACCTGGTATAGTTTATGTGCTCAAGAGGGGGAGCATGGAAGCAC GGGAAAATGCTGCAGCTACCCTCTTTAGCCTTTCGGTGGTGGATGAGAATAAGGTTACAA TTGGTGCTTCAGGGGCAATCCCACCACTGGTGACATTGTTAAGTGAAGGTACCCAGAGGG GGAAGAAGGATGCTGCAACCGCACTGTTCAACTTGTGTATTTACCAAGGGAACAAGGGAA AGGCAGTGAGAGCTGGAGTAGTGCCCACACTGATGCGGCTGCTGACAGAACCTGGAGGTG GAATGGTGGATGAGGCACTGGCTATACTTGCAATCTTAGCCAGCCATCCTGAAGGGAAGG CAGCCATTGGATCCTCCGAGGCAGTGCCAGTTTTGGTGGAGGTTATTGGCAACGGGTCCC CCAGGAACAGAGAAAATGCAGCTGCAGTTTTGGTGCATCTTTGTGCTGGTGACCAACATC ATCTAGCGGAAGCTCAGGAGCTTGGAGTGATGGGTCCATTGGTGGATCTGGCTCAAAATG GCACCGATAGGGGCAAGCGAAAGGCTGCACAGTTGCTTGAGCGCATGGGCAGGTTTATTG AACAGCAGCAGCAACAGCAGGCTCTGGTGCAAGCTCAGGCTCAAGCTCAGGCTCAGGCTC AGGCTCAGGCCCAGCCCCAGGCACATACCCACACCCACACAGAGAGCCCGCACACACAGC TGTCCACGCTAATGAATGCTGTTGATGGCTGAGGTTTTCTTGTGTCGTATTGGGTTGAGG CGGCTTTGCTTAATTAGAAGGGGAGGTGGAAGATCACCTGCCCCACCTGTTAAAGTTATT CATTTGGTTTGTGTGGGGTTGAGGCTTTGATGATTTAAAAAGAGTCATCATGATCCAAAA AAGAGAAGGAAAAGGACTGAAATATGATCTGACGAGTGTGAGATGTGCCATCACAACATG TACGCCTGTAATCATCCTCAGTTTTTATTGAAGGAGATGTTTTCTGTATCCAGATCAAAG TGCTTCATATTGAAGTTTGCTAATGTAACTATCGACAGCGAGAAAACTACATTCAAAGAA ATGGAAATGCCAGAAATTGAAATGTTATAATTCTGCAA