Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g04480.t01
CDS Infomation

cds chromosome:12X:6:5422703:5425089:-1 gene:VIT_06s0004g04480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGAAGATCTCCTCACGAGCTTGTCAATGGAAAATCACCATCCATCAACGCTATTA
TCCATGGATTCAAGTTCAATTACTCATGAAGAATTGGAAATGAATAGGCAGATGATCCTT
TCTAGGCCTCCTGATATTAATTTGCCCCTGTCTTCAGAGCGTAGTCCTCCGTCACAATCA
TGGAATACAGACTCTTTTGACATGCTAGATGTTGGCCTTGGACCTCAGGTGAATGAGCCT
GATACCCTACTGAATCATACTAAGGTTGGGCGTAAATGTACCAAGAGATTGGATAGTGTG
TGGGGTGCTTGGTTTTTCTTTAATTACTATTTCAAACCTGTTTTCAATGAGAAATCAAAG
AGTAAGGTTGTCCGGGATGGTAGTGGGATTTCTAGTTTTGACAAGTCTCATCTGCAGCTT
GAGGTTTTCTTGGTGCAGCATGATATGGAGAACATGTACATGTGGGTTTTTAAGGGAAAG
CCTGAGAATGCGTTGGGTAAGATGCAGTTGAGGAGTTATATGAATGGTCATTCTCGCCAA
GGAGAGCGTCCATTTCCCTTTAGTGCAGATAAGGGTTTTGTTCGATCTCATAGAATGCAG
CGGAAACACTATAGGGGTCTCTCCAATCCTCAGTGTGTGCATGGGATCGAGGTTGTTTCA
TCACCCAACCTCATGGACCTCAATGGAGAGGAACAAAAGAGGTGGGTAGAACTCACTGGT
AGGGAGCTGGATTTCTCAGTCCCTCCTGAAGCAAGTGAGTTTTGTTCGTGGAGAAACCTT
CCGAGCACAGAATTTGAGCTTGAGAGAGCCCTTCCTTCTTTAAAGAACAACCCTCATCCC
CAGCCAAAGAAATTGCTCAATGGTTCTGGTTTGAATTTGTCAACTAGACTATCAAACCAT
GTAAATGGTGGTGGAATAGATCTCGTCACCATTTGCAACAAGCGGAAAAAGGATTTTTTC
CCACATGGGAATGATGAGGATTGTTATTTGCTCATTAATCAGCATTCTAATAGGGTTCAA
GATACAGACATCCACTCGATTGAGCTGCCATGGTTGAACAAGTTTAGTGGCGTAATGAGG
AATGTATCTGGGCCTGTTACAGCAGCAAAAACTATTTATGAGGATGAAGAAGGATACTTG
ATCATCATTAGTTTGCCCTTTGCTGATCTTAAAAGGGTGAAAGTTACTTGGTGGAACACA
CTCACTCATGGTGTGGTTAAGATATCATCTGTAAGCACGTCATGTATGCCCATCATCAAG
AGAAACGATAGAACATTCAAGCTCACTGATCCAATGCCTGAGCACTGTCCACCAGGGGAA
TTCATTAGGGAAATCCCACTAGCTACTCGAATACCAGATGATGCCAAGCTAGAAGCATAT
GGTGATGAAACAGGTACAGTTCTTGAAATACTGGTCCCGAAACACCGTGTAGGGCCAGAA
GAACATGAGGTTCGTGTTTGCCTTCGCCCTCACCTTGGCGGGAATGAGCTTTTGTTGTCT
TGA

Peptide Sequence

PEP ID

VIT_06s0004g04480.t01
PEP Infomation

pep chromosome:12X:6:5422703:5425089:-1 gene:VIT_06s0004g04480 transcript:VIT_06s0004g04480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGEDLLTSLSMENHHPSTLLSMDSSSITHEELEMNRQMILSRPPDINLPLSSERSPPSQS
WNTDSFDMLDVGLGPQVNEPDTLLNHTKVGRKCTKRLDSVWGAWFFFNYYFKPVFNEKSK
SKVVRDGSGISSFDKSHLQLEVFLVQHDMENMYMWVFKGKPENALGKMQLRSYMNGHSRQ
GERPFPFSADKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPNLMDLNGEEQKRWVELTG
RELDFSVPPEASEFCSWRNLPSTEFELERALPSLKNNPHPQPKKLLNGSGLNLSTRLSNH
VNGGGIDLVTICNKRKKDFFPHGNDEDCYLLINQHSNRVQDTDIHSIELPWLNKFSGVMR
NVSGPVTAAKTIYEDEEGYLIIISLPFADLKRVKVTWWNTLTHGVVKISSVSTSCMPIIK
RNDRTFKLTDPMPEHCPPGEFIREIPLATRIPDDAKLEAYGDETGTVLEILVPKHRVGPE
EHEVRVCLRPHLGGNELLLS

Transcript Sequence

Transcript ID

VIT_06s0004g04480.t01
Transcript Infomation

cdna chromosome:12X:6:5422703:5425089:-1 gene:VIT_06s0004g04480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAGGATTGCTTGTGAAGATCTTTCTTCTTTGTGGATACCAAGCTGTTTCTCAAAAGGT
AGTTTTCCTCATTTTCTTTGTTTTCCATTGTATAGGTTTTTAGAGTATTAGTTCGTTGTT
CTTGTTTGGGATTTTCCGGAATTTTCCGCTTCTTGCTTTCTAGTTCAATAATTGTAGTAT
TCTGTGTGTTGTTGATTTTGGAGTTGAAGTGGTTTTGAGTATGGCTGTAATTCAATAAGT
GTAGGGTTATTTGGAAGGGAATTCATTTTGAGTATGGGTGCGTTGGTGTGAGGTGCTTTT
GTTGGTATAGCGGAAAGGGAAAATATGGGAGAAGATCTCCTCACGAGCTTGTCAATGGAA
AATCACCATCCATCAACGCTATTATCCATGGATTCAAGTTCAATTACTCATGAAGAATTG
GAAATGAATAGGCAGATGATCCTTTCTAGGCCTCCTGATATTAATTTGCCCCTGTCTTCA
GAGCGTAGTCCTCCGTCACAATCATGGAATACAGACTCTTTTGACATGCTAGATGTTGGC
CTTGGACCTCAGGTGAATGAGCCTGATACCCTACTGAATCATACTAAGGTTGGGCGTAAA
TGTACCAAGAGATTGGATAGTGTGTGGGGTGCTTGGTTTTTCTTTAATTACTATTTCAAA
CCTGTTTTCAATGAGAAATCAAAGAGTAAGGTTGTCCGGGATGGTAGTGGGATTTCTAGT
TTTGACAAGTCTCATCTGCAGCTTGAGGTTTTCTTGGTGCAGCATGATATGGAGAACATG
TACATGTGGGTTTTTAAGGGAAAGCCTGAGAATGCGTTGGGTAAGATGCAGTTGAGGAGT
TATATGAATGGTCATTCTCGCCAAGGAGAGCGTCCATTTCCCTTTAGTGCAGATAAGGGT
TTTGTTCGATCTCATAGAATGCAGCGGAAACACTATAGGGGTCTCTCCAATCCTCAGTGT
GTGCATGGGATCGAGGTTGTTTCATCACCCAACCTCATGGACCTCAATGGAGAGGAACAA
AAGAGGTGGGTAGAACTCACTGGTAGGGAGCTGGATTTCTCAGTCCCTCCTGAAGCAAGT
GAGTTTTGTTCGTGGAGAAACCTTCCGAGCACAGAATTTGAGCTTGAGAGAGCCCTTCCT
TCTTTAAAGAACAACCCTCATCCCCAGCCAAAGAAATTGCTCAATGGTTCTGGTTTGAAT
TTGTCAACTAGACTATCAAACCATGTAAATGGTGGTGGAATAGATCTCGTCACCATTTGC
AACAAGCGGAAAAAGGATTTTTTCCCACATGGGAATGATGAGGATTGTTATTTGCTCATT
AATCAGCATTCTAATAGGGTTCAAGATACAGACATCCACTCGATTGAGCTGCCATGGTTG
AACAAGTTTAGTGGCGTAATGAGGAATGTATCTGGGCCTGTTACAGCAGCAAAAACTATT
TATGAGGATGAAGAAGGATACTTGATCATCATTAGTTTGCCCTTTGCTGATCTTAAAAGG
GTGAAAGTTACTTGGTGGAACACACTCACTCATGGTGTGGTTAAGATATCATCTGTAAGC
ACGTCATGTATGCCCATCATCAAGAGAAACGATAGAACATTCAAGCTCACTGATCCAATG
CCTGAGCACTGTCCACCAGGGGAATTCATTAGGGAAATCCCACTAGCTACTCGAATACCA
GATGATGCCAAGCTAGAAGCATATGGTGATGAAACAGGTACAGTTCTTGAAATACTGGTC
CCGAAACACCGTGTAGGGCCAGAAGAACATGAGGTTCGTGTTTGCCTTCGCCCTCACCTT
GGCGGGAATGAGCTTTTGTTGTCTTGAATGAGACATTAGTTGGAGAAATGCAAGGGCAGC
TGTCAGTGATCAATCTTCTGTTGCTTACTGTTTATTAAAGAAAAAAACTTAGAAAACAAA
ATTCACATTTTTAAATACCACATTTCTTCTCCAATTTTAGACTCAAAAACTGATTGTTTT
GGTGTTTTCTTACACTTGGATGGCTTTAGTCTGGGACTGCTTCCAAGCTTCTAGGTTGAA
GTTAAGGTTAATGATTTTTGGAGACCTTGGCTATATTGTTGCTGACCGATTTTACTGCCT
TTATTAGGCATTAGCATTGTGATAGATGATTATTTGTGAACCTAAGAAGGGGAAAGAATT
GTACTAGTCTCTTTCTTGTTGTAGTAGTGGCATTGGATGTAATTGCTCCATCCTCAAGTA
TGAAA