Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g04460.t01
CDS Infomation

cds chromosome:12X:6:5407544:5415216:-1 gene:VIT_06s0004g04460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAGAACGCTAATCTCTTCTCCACCCTTCATCGGGAAGCCACTCCCTTCCCTCAGC
TCTCGCCATGGCCTCCTACACTCTCTTCCTCACCGTAGACTCATCTCCACCAGAGTCAAA
TTCAGTTTACATGACCTTCCTCCTATTCACTCCTTAGATTCTTCTTCGATTGATTTTGCC
GGAATTGTTAGCCGAGCTGAAAGCTTGCTCTACACTCTCGCCGACGCTGCAGTTTCTGCC
GATCCGGCTGCCGCTGGACCCGCGTCAGGCACAGCTGATGCTGCAGTGCAGAAGAACGGT
GGGTGGTTCGGGTTTATTTCGGAGGGTATGGAAGTTGTTTTGAAGGTTCTGGAGGATGGC
CTAACAGCAGTGCATGTTCCCTATGCATATGGATTTGCGATTATATTGCTCACTGTTATC
GTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGGTTGAATCAACACTGGCCATGCAA
AATCTTCAACCAAAGATCAAGGCCATTCAAGAAAGATATAAGGGCAATCAGGAAAGAATA
CAACTGGAGACATCGCGGCTTTATAAGCAAGCTGGGGTTAATCCTTTGGCAGGATGTTTC
CCAACTTTGGCCACAATACCAGTCTGGATAGGTTTGTATCAAGCTCTTTCAAATGTGGCA
AATGAGGGACTGTTGACAGAAGGGTTTTTTTGGATTCCCTCTTTGGGTGGGCCAACTACA
ATTGCTGCTCGACAAAGTGGATCTGGCATTTCTTGGCTTATTCCGTTTGTGGATGGCCAT
CCACCATTGGGCTGGCAAGACACTGCAGCATACCTTGTTTTACCTGTCCTCCTTGTCATT
TCTCAGTATGTTTCAATGGAGCTGATGAAGCCACCTCAGACTGATGATCCATCTCAAAAG
AATACACTTCTTGTTTTCAAGTTTCTTCCACTCATGATTGGTTACTTTTCTCTATCTGTC
CCATCAGGATTATCAATTTACTGGTTCACAAACAATGTACTGAGCACAGCACAACAAGTA
TGGTTACGCAAATTAGGTGGTGCCAAACCTGTTGTGAATGAGGATGCAAGTGGAATCATT
ACTGCAGGGCGTGCAAAAAGATCAGCTTCTCAGCCTGCAAGGGCTGGTGATAGGTTTAGA
CAACTAAAAGAAGAAGAGAAGAAGAAAAAAATAAGCAAGGCATTGCCAGCAGAAGAGATT
CAGGCTCTTGCATCTGAATCTGATTCTGATGAAGGTTCAGATGAAGAGACTAAAGACAAG
GGTGATGATGTTTTAGAAGAGGCATATGTTTCTAGTGGTAGCAAACAGGTTCCACAATAT
GCTGGACCAAGGAGAAGCAAGCGGTCAAAGCGGAAGCGTGCCGGATGA

Peptide Sequence

PEP ID

VIT_06s0004g04460.t01
PEP Infomation

pep chromosome:12X:6:5407544:5415216:-1 gene:VIT_06s0004g04460 transcript:VIT_06s0004g04460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MARTLISSPPFIGKPLPSLSSRHGLLHSLPHRRLISTRVKFSLHDLPPIHSLDSSSIDFA
GIVSRAESLLYTLADAAVSADPAAAGPASGTADAAVQKNGGWFGFISEGMEVVLKVLEDG
LTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQNLQPKIKAIQERYKGNQERI
QLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTT
IAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQTDDPSQK
NTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNEDASGII
TAGRAKRSASQPARAGDRFRQLKEEEKKKKISKALPAEEIQALASESDSDEGSDEETKDK
GDDVLEEAYVSSGSKQVPQYAGPRRSKRSKRKRAG

Transcript Sequence

Transcript ID

VIT_06s0004g04460.t01
Transcript Infomation

cdna chromosome:12X:6:5407544:5415216:-1 gene:VIT_06s0004g04460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCCCCCACTGCCCAAGCGCGACTCCTCATCATCTCCTCATGAGGAGCTGAATCCAAACC
CTAGAAACCTTCACCACAGCGTCCATGGCGAGAACGCTAATCTCTTCTCCACCCTTCATC
GGGAAGCCACTCCCTTCCCTCAGCTCTCGCCATGGCCTCCTACACTCTCTTCCTCACCGT
AGACTCATCTCCACCAGAGTCAAATTCAGTTTACATGACCTTCCTCCTATTCACTCCTTA
GATTCTTCTTCGATTGATTTTGCCGGAATTGTTAGCCGAGCTGAAAGCTTGCTCTACACT
CTCGCCGACGCTGCAGTTTCTGCCGATCCGGCTGCCGCTGGACCCGCGTCAGGCACAGCT
GATGCTGCAGTGCAGAAGAACGGTGGGTGGTTCGGGTTTATTTCGGAGGGTATGGAAGTT
GTTTTGAAGGTTCTGGAGGATGGCCTAACAGCAGTGCATGTTCCCTATGCATATGGATTT
GCGATTATATTGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG
GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTCAAGAAAGA
TATAAGGGCAATCAGGAAAGAATACAACTGGAGACATCGCGGCTTTATAAGCAAGCTGGG
GTTAATCCTTTGGCAGGATGTTTCCCAACTTTGGCCACAATACCAGTCTGGATAGGTTTG
TATCAAGCTCTTTCAAATGTGGCAAATGAGGGACTGTTGACAGAAGGGTTTTTTTGGATT
CCCTCTTTGGGTGGGCCAACTACAATTGCTGCTCGACAAAGTGGATCTGGCATTTCTTGG
CTTATTCCGTTTGTGGATGGCCATCCACCATTGGGCTGGCAAGACACTGCAGCATACCTT
GTTTTACCTGTCCTCCTTGTCATTTCTCAGTATGTTTCAATGGAGCTGATGAAGCCACCT
CAGACTGATGATCCATCTCAAAAGAATACACTTCTTGTTTTCAAGTTTCTTCCACTCATG
ATTGGTTACTTTTCTCTATCTGTCCCATCAGGATTATCAATTTACTGGTTCACAAACAAT
GTACTGAGCACAGCACAACAAGTATGGTTACGCAAATTAGGTGGTGCCAAACCTGTTGTG
AATGAGGATGCAAGTGGAATCATTACTGCAGGGCGTGCAAAAAGATCAGCTTCTCAGCCT
GCAAGGGCTGGTGATAGGTTTAGACAACTAAAAGAAGAAGAGAAGAAGAAAAAAATAAGC
AAGGCATTGCCAGCAGAAGAGATTCAGGCTCTTGCATCTGAATCTGATTCTGATGAAGGT
TCAGATGAAGAGACTAAAGACAAGGGTGATGATGTTTTAGAAGAGGCATATGTTTCTAGT
GGTAGCAAACAGGTTCCACAATATGCTGGACCAAGGAGAAGCAAGCGGTCAAAGCGGAAG
CGTGCCGGATGAAAAGATTGTATATCTATTTTTGTGTAGTTTCCGGTGAGTGCTGTATAT
GACAAATTGTATTTTTAGTTAATATATACGGCCATTTTTATGCTGGCTCATTCATTTTAA
GACTCCAGTGCCCAATCATGAAAAT