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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g04130.t01
CDS Infomation

cds chromosome:12X:6:5092798:5097756:-1 gene:VIT_06s0004g04130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [Source:UniProtKB/TrEMBL;Acc:D7SKL3]
Sequence

ATGCATCAACTGGCCAATCTCTACCTCTTGGCCTACAATTCTCTTCAAGCCCTTGGATGG
GCGGTTTCTCTTTCTAGAATTTTGAGTTCCTTCTTAGACACTAGATCCTTCAATGGAGCT
TACGCTTCTGCAGGAGATCTAGTCTGTCTATTGCAAACTGTTTCATTCTTGGAAGTTGTA
CATGGAGCCATAGGTCTGGTTCCAAGTGGGGTGCTGCTTCCTCTGATGCAATGGGGAGGA
AGGACTCATTTCCTTTTAGCAATTGTTCGTCGAATTGTTGAGGTTCAGGAGTTACCATCA
GTTTTCATAACTTTCATTGCTTGGAGTATTAGTGAGGTAATCCGGTATTCACATTATGCT
TTGCATTGCATGGGAAGTTGTCCATCATGTATTACCTACCTCAGGTACACTGCTTTCATT
CTGTTGTACCCAGTGGGGGTTGCTCCTGGTGAAATGTGGCTCATGTACCAAGCACTTCCA
TTTATAAAAAGGAAAAACATCAGCCATTATTATTTTGTCTGGGTTGTGCTTCTGTGCTAT
CCATTTCTATGGTTGAAACTTTACCTGCATTTATTTAAGCAACGACGGTCAAAACTTGGT
AAACACGATGGAAAGAAGAGAAGGTGA

Peptide Sequence

PEP ID

VIT_06s0004g04130.t01
PEP Infomation

pep chromosome:12X:6:5092798:5097756:-1 gene:VIT_06s0004g04130 transcript:VIT_06s0004g04130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [Source:UniProtKB/TrEMBL;Acc:D7SKL3]
Sequence

MHQLANLYLLAYNSLQALGWAVSLSRILSSFLDTRSFNGAYASAGDLVCLLQTVSFLEVV
HGAIGLVPSGVLLPLMQWGGRTHFLLAIVRRIVEVQELPSVFITFIAWSISEVIRYSHYA
LHCMGSCPSCITYLRYTAFILLYPVGVAPGEMWLMYQALPFIKRKNISHYYFVWVVLLCY
PFLWLKLYLHLFKQRRSKLGKHDGKKRR

Transcript Sequence

Transcript ID

VIT_06s0004g04130.t01
Transcript Infomation

cdna chromosome:12X:6:5092798:5097756:-1 gene:VIT_06s0004g04130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [Source:UniProtKB/TrEMBL;Acc:D7SKL3]
Sequence

AGAGAATGCATCAACTGGCCAATCTCTACCTCTTGGCCTACAATTCTCTTCAAGCCCTTG
GATGGGCGGTTTCTCTTTCTAGAATTTTGAGTTCCTTCTTAGACACTAGATCCTTCAATG
GAGCTTACGCTTCTGCAGGAGATCTAGTCTGTCTATTGCAAACTGTTTCATTCTTGGAAG
TTGTACATGGAGCCATAGGTCTGGTTCCAAGTGGGGTGCTGCTTCCTCTGATGCAATGGG
GAGGAAGGACTCATTTCCTTTTAGCAATTGTTCGTCGAATTGTTGAGGTTCAGGAGTTAC
CATCAGTTTTCATAACTTTCATTGCTTGGAGTATTAGTGAGGTAATCCGGTATTCACATT
ATGCTTTGCATTGCATGGGAAGTTGTCCATCATGTATTACCTACCTCAGGTACACTGCTT
TCATTCTGTTGTACCCAGTGGGGGTTGCTCCTGGTGAAATGTGGCTCATGTACCAAGCAC
TTCCATTTATAAAAAGGAAAAACATCAGCCATTATTATTTTGTCTGGGTTGTGCTTCTGT
GCTATCCATTTCTATGGTTGAAACTTTACCTGCATTTATTTAAGCAACGACGGTCAAAAC
TTGGTAAACACGATGGAAAGAAGAGAAGGTGAAGGTTTGAGCTCATTTTGGCACCAATCA
ATTATTTGGTTAGTGTTTACTTTGGACATAGAAATTCAGACATCTTGTTCCATGGTTGTG
GATCTTTTTGATATCTTTCAATGTATTTCTTCCTTGATCCAATGTGTCAAACCATTTTAG
TGGTGAAGTTTCTGTTTTAGGGACTTGTAATGATTGAAATATTAGGTGTAAAGCAAATGG
TATTTTTGCTTTAATGAAGCCAATGGTACTGATCCTACCAAATTGTTCCTCTGAATTCTA
CTGAATATTTGTCTTGATGCAATACTATGCAATCGCTAATGTTCAGTTTC