Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g04060.t01
CDS Infomation

cds chromosome:12X:6:5035981:5037987:-1 gene:VIT_06s0004g04060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAATTGATTTGACTCCGAAGTCGGCGAAGGAGGCGTACGGGAGCAATGGGGGGTCA
TACTTGGCGTGGTCCCCATCGGAGCTTCCCATGCTTGGTGAAGGCAACATCGGCGCAGCC
AAGATCATTCTCCACCAACATGGGTTTGCTCTTCCTAGCTACTCTGATTCCTCAAAGGTC
GCTTATGTTTTACAAGGAAATGGTGTTGCTGGAATTGTTCTTCCTGAATCAGAGGAGAAG
GTAGTCCCTATTAAGAAGGGCGATGCACTTGCTCTTCCCTTTGGTGTTGTTACATGGTGG
TACAACAAAGAGGATACTGACCTAGAAGTTTTATTCTTGGGTGATACCTCAAAGGCCCAC
AAAGCTGGTGAATTCACTGACTTCTTTCTCACAGGCTCCAATGGTATCTTCACCGGCTTC
TCAACTGAGTTTGTGAGCCGAGCATGGGACCTAGAAGAGGATGTTGTTAAATCCCTTGTT
GGAAAGCAATCAGGGAAGGGCATTGTTAAGCTTGAGGGGACTTTTGAGATGCCTGAGCCA
AAGAAAGAACATCGAAATGGCTTGGTATTGAACTGCTTGGAAGCTCCATTGGATGTTGAC
ATTAAGAATGGTGGAAGGGTTGTGGTTTTGAATACTCAGAATTTACCTTTGGTTGGTGAG
GTGGGGCTTGGTGCTGATCTTGTTAGGTTGGATGGAAGTGCAATGTGCTCCCCTGGTTTT
TCCTGTGACTCTGCATTACAGGTGACCTACATTGTTAGGGGTAGTGGCCGTGTTCAAGTG
GTCGGTGTTGATGGTCACCGGGTCTTGGAAACCACCCTCAAGGCAGGCAGTTTGTTCATT
GTACCAAGGTTCTTTGTTGTTTCAAAGATTGGTGACCCAGAAGGAATGGACTGGTTCTCT
ATCATTACAACTCCCAATCCTATATTCACCCATTTAGCAGGAAGGACTTCAGCATGGAAG
GCCCTGTCTTCTAAAGTACTGGAGGCTTCTTTCAGTGTGGGTTCAGATATGGAGAAGCTT
TTCCGCTCCAAGAGGAATGCAGATGCCATCTTCTTTCCTCCCCCAAATTAA

Peptide Sequence

PEP ID

VIT_06s0004g04060.t01
PEP Infomation

pep chromosome:12X:6:5035981:5037987:-1 gene:VIT_06s0004g04060 transcript:VIT_06s0004g04060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEIDLTPKSAKEAYGSNGGSYLAWSPSELPMLGEGNIGAAKIILHQHGFALPSYSDSSKV
AYVLQGNGVAGIVLPESEEKVVPIKKGDALALPFGVVTWWYNKEDTDLEVLFLGDTSKAH
KAGEFTDFFLTGSNGIFTGFSTEFVSRAWDLEEDVVKSLVGKQSGKGIVKLEGTFEMPEP
KKEHRNGLVLNCLEAPLDVDIKNGGRVVVLNTQNLPLVGEVGLGADLVRLDGSAMCSPGF
SCDSALQVTYIVRGSGRVQVVGVDGHRVLETTLKAGSLFIVPRFFVVSKIGDPEGMDWFS
IITTPNPIFTHLAGRTSAWKALSSKVLEASFSVGSDMEKLFRSKRNADAIFFPPPN

Transcript Sequence

Transcript ID

VIT_06s0004g04060.t01
Transcript Infomation

cdna chromosome:12X:6:5035981:5037987:-1 gene:VIT_06s0004g04060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTGGTTTTGTTTGGTTGCAGAGAAAAAAACACAAGGGAAGATGGAAATTGATTTGACT
CCGAAGTCGGCGAAGGAGGCGTACGGGAGCAATGGGGGGTCATACTTGGCGTGGTCCCCA
TCGGAGCTTCCCATGCTTGGTGAAGGCAACATCGGCGCAGCCAAGATCATTCTCCACCAA
CATGGGTTTGCTCTTCCTAGCTACTCTGATTCCTCAAAGGTCGCTTATGTTTTACAAGGA
AATGGTGTTGCTGGAATTGTTCTTCCTGAATCAGAGGAGAAGGTAGTCCCTATTAAGAAG
GGCGATGCACTTGCTCTTCCCTTTGGTGTTGTTACATGGTGGTACAACAAAGAGGATACT
GACCTAGAAGTTTTATTCTTGGGTGATACCTCAAAGGCCCACAAAGCTGGTGAATTCACT
GACTTCTTTCTCACAGGCTCCAATGGTATCTTCACCGGCTTCTCAACTGAGTTTGTGAGC
CGAGCATGGGACCTAGAAGAGGATGTTGTTAAATCCCTTGTTGGAAAGCAATCAGGGAAG
GGCATTGTTAAGCTTGAGGGGACTTTTGAGATGCCTGAGCCAAAGAAAGAACATCGAAAT
GGCTTGGTATTGAACTGCTTGGAAGCTCCATTGGATGTTGACATTAAGAATGGTGGAAGG
GTTGTGGTTTTGAATACTCAGAATTTACCTTTGGTTGGTGAGGTGGGGCTTGGTGCTGAT
CTTGTTAGGTTGGATGGAAGTGCAATGTGCTCCCCTGGTTTTTCCTGTGACTCTGCATTA
CAGGTGACCTACATTGTTAGGGGTAGTGGCCGTGTTCAAGTGGTCGGTGTTGATGGTCAC
CGGGTCTTGGAAACCACCCTCAAGGCAGGCAGTTTGTTCATTGTACCAAGGTTCTTTGTT
GTTTCAAAGATTGGTGACCCAGAAGGAATGGACTGGTTCTCTATCATTACAACTCCCAAT
CCTATATTCACCCATTTAGCAGGAAGGACTTCAGCATGGAAGGCCCTGTCTTCTAAAGTA
CTGGAGGCTTCTTTCAGTGTGGGTTCAGATATGGAGAAGCTTTTCCGCTCCAAGAGGAAT
GCAGATGCCATCTTCTTTCCTCCCCCAAATTAAGGAGGAAACTCGCTTCTATTTCCTTAG
TTACTACTTGCTACAATAAAGGGCTTCTAGTTCTGGAACTGTTTCAGCCCTCATTGACAA
TGAGTTCAACTTAGATTGCAGGCTTTTCCCTGAAAACCAAACAGGGTTACTTTATAAGTG
TTTTTCTTGTTTATGAGTTCTAGCTTATGTTTGTCTTTGTTCTTATCACCTTCATGAAGT
TCAATTCAAGAAATCACAAATTGAAGTGCTGTTTCTGATTA