Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03990.t01
CDS Infomation

cds chromosome:12X:6:4923635:4933586:-1 gene:VIT_06s0004g03990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGACGCAGAAGCTAAGGTCCCTGATTATAGGCTTCTCCTCTCCTGTCCCTCTGGT
CTTTCCCCTTCTCAGGTCTCTGTGGATTTCAGCGAACGATTTGATAGGATTCCGCATCCG
GATATTAGCTTGGACAACTCCATATCTGAGATATGGGATGGAAGGGTTCAACAGAATGCA
TCATTATATAATGGAACAAAGTTTCGGTATGCAGGACACATCATGCATGGTGGAGGTGGT
TCTGATGAGAAGTCCCATGTATGCCTACACCTTGGATTAACAGATTATAGGACTTTTGTG
GGGACAAATTTAAATCCTTTGTGGGAAAAGTTTCTGGTTCCATCTGAAGATGACTCTGTA
CGGTGCCAACACACCTCAAGTCCGCTGGGTAATGGTGCAATCATAGAGACATCTGACAAG
AGGATAGTTGTATTGCGGCGAAGTAATAATGTTGGGGAATTTCCTGGACATTTTGTGTTC
CCAGGAGGCCATCCAGAGCCCCAAGAAATCGGAATAGTTTCTCATCAGTTTGACAAAGAC
ATGGACCCTGATTTTATTAACAGGAAGGTTTCTCAGGAGATGTTTGACAGCATTGTTCGT
GAAGTAGTTGAAGAGATTGGAGTACCTGAGGCGTCCCTATGCAATCCTGTACTTATAGGA
GTATCTTGCAGGGTGCTGAATGTTAGACCAGCTGCATTTTTCTTTATCAAATGCAATCTT
CACTCTAAGGAAATTCAACAACTTTATTCTACTGCACAAGATGGCTATGAGTCAACGCAC
CTTTACACTGTTTCAAGGAATGATTTAAAGGACATGACATCTAAAATGCCTGGATGCCAC
CAGGGTGGATTTGCTCTCTATATGTTAATGGTAGAAGCTGTGAAGGATGTTTGA

Peptide Sequence

PEP ID

VIT_06s0004g03990.t01
PEP Infomation

pep chromosome:12X:6:4923635:4933586:-1 gene:VIT_06s0004g03990 transcript:VIT_06s0004g03990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADAEAKVPDYRLLLSCPSGLSPSQVSVDFSERFDRIPHPDISLDNSISEIWDGRVQQNA
SLYNGTKFRYAGHIMHGGGGSDEKSHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDSV
RCQHTSSPLGNGAIIETSDKRIVVLRRSNNVGEFPGHFVFPGGHPEPQEIGIVSHQFDKD
MDPDFINRKVSQEMFDSIVREVVEEIGVPEASLCNPVLIGVSCRVLNVRPAAFFFIKCNL
HSKEIQQLYSTAQDGYESTHLYTVSRNDLKDMTSKMPGCHQGGFALYMLMVEAVKDV

Transcript Sequence

Transcript ID

VIT_06s0004g03990.t01
Transcript Infomation

cdna chromosome:12X:6:4923635:4933586:-1 gene:VIT_06s0004g03990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAGAGCGTGGAGGTAGGCATTTCAATGGAGAAGGCGATGGCAGACGCAGAAGCTAAGG
TCCCTGATTATAGGCTTCTCCTCTCCTGTCCCTCTGGTCTTTCCCCTTCTCAGGTCTCTG
TGGATTTCAGCGAACGATTTGATAGGATTCCGCATCCGGATATTAGCTTGGACAACTCCA
TATCTGAGATATGGGATGGAAGGGTTCAACAGAATGCATCATTATATAATGGAACAAAGT
TTCGGTATGCAGGACACATCATGCATGGTGGAGGTGGTTCTGATGAGAAGTCCCATGTAT
GCCTACACCTTGGATTAACAGATTATAGGACTTTTGTGGGGACAAATTTAAATCCTTTGT
GGGAAAAGTTTCTGGTTCCATCTGAAGATGACTCTGTACGGTGCCAACACACCTCAAGTC
CGCTGGGTAATGGTGCAATCATAGAGACATCTGACAAGAGGATAGTTGTATTGCGGCGAA
GTAATAATGTTGGGGAATTTCCTGGACATTTTGTGTTCCCAGGAGGCCATCCAGAGCCCC
AAGAAATCGGAATAGTTTCTCATCAGTTTGACAAAGACATGGACCCTGATTTTATTAACA
GGAAGGTTTCTCAGGAGATGTTTGACAGCATTGTTCGTGAAGTAGTTGAAGAGATTGGAG
TACCTGAGGCGTCCCTATGCAATCCTGTACTTATAGGAGTATCTTGCAGGGTGCTGAATG
TTAGACCAGCTGCATTTTTCTTTATCAAATGCAATCTTCACTCTAAGGAAATTCAACAAC
TTTATTCTACTGCACAAGATGGCTATGAGTCAACGCACCTTTACACTGTTTCAAGGAATG
ATTTAAAGGACATGACATCTAAAATGCCTGGATGCCACCAGGGTGGATTTGCTCTCTATA
TGTTAATGGTAGAAGCTGTGAAGGATGTTTGATTGAAGTCCAGGACAGATGATCAATCAA
GGTTATCAGCCCTTTGCATCTTGGTGGTTCAGTAACATTTTGTTGCTTTGATTTTCTTTA
ATCCAGCATAAATAATCACCTCTGAGGTTGATGTGAAAACAGAGCTGTGAAGGCTTACTG
CAAACAGGCATGATTATGAAAATGTATTAATCTTTAGAATTTAATGGCAATACATGGCTT
TGCCTTATATCCTTTAATAAACCCAAAAA