Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03980.t01
CDS Infomation

cds chromosome:12X:6:4916077:4919403:-1 gene:VIT_06s0004g03980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCACCAGCTGGGCACCACTACCAGAGCCTACCCCGGAAAAAGATGACCAAACAG
TTGACGGGGAAACGCGACGATACTCCCCTGCATTCTGCAGCGAGAGCAGGACAACTAGAG
GTTGTGGCCCGGACCCTTTCCAGTGCTGGAGAAGAAGAATTGCTAGAGTTATTATCTAAG
CAAAACCAATCTGGTGAAACAGCACTTTACGTTGCTGCAGAATATGGGTATGTTGATGTG
GTTAGGGAGATGATACAGTACCATGATCTCAGTACTGCTAGCATCAAAGCAAGGAATGGC
TATGATGCATTCCACATTGCTGCTAAACAAGGGGATTTGGAGGTATTGAAAATACTAATG
GAGGCCCTTCCGGGGCTCTCTTTGACTGAGGATGTATCAAATACCACTGCCTTGCACACT
GCTGCAAATCAAGGGTATATTGAGGTGGTGAATTTGCTCTTGGAGTCAGGGAGTGGGGTG
GCTGCCATTGCTAAAAGTAATGGGAAAACAGCCCTGCACTCTGCCGCAAGAAAAGGGCAT
TTGGAAGTCATCAAAGCCCTTTTAGAGAAGGAGCCTGGGGTTGCTACACGAATTGATAAG
AAGGGCCAGACTGCACTACATATGGCTGTGAAGGGACAGAACCTTGAGGTGGTTGAGGAG
CTGATGAAGGCCGATCCTTCATTGGTAAACATGGTTGATACTAAGGGCAACACAGCATTG
CATATAGCCTCCCGGAAGGGCAGGGAACAGATTGTTAGGAAATTACTAAGTCATGATGAA
ACCGATACAAAAGCTGTGAACAAGTCTGGGGAAACTGCCTTTGACACTGCAGAGAAGACT
GGGAACCCCAACATTGCAACCATCCTGCAGGAGCACGGGGTTCAGAGTGCCAAAGCAATG
AAGCCGCAAGTAACAAGCACAGCCCGTGAATTGAAACAAACTGTAAGCGACATAAAGCAT
GAAGTCCACTACCAGCTAGAACATACTCGGCAAACTAGGAGACGGGTGCAGGGCATTGCC
AAACGCCTCAACAAAATGCATGGAGAAGGTCTAAACAATGCAATCAACTCCACAACTGTT
GTTGCTGTCCTCATTGCCACCGTCGCCTTTGCAGCCATTTTCACTGTCCCTGGCCAATAT
GTTGATGACCCAACCAACATTCCTTATGGGTTTTCTCTTGGGGAAGCAAATATCGCTCCC
AAAATATCGTTCATCATTTTCTTTATATTTGACTCGATAGCCCTCTTCATTTCTTTGGCT
GTTGTGGTGGTGCAAACCTCAGTTGTGGTCATAGAGAGCAAGGCAAAGAAGCAGATGATG
GCAATCATTAACAAGCTAATGTGGCTGGCTTGTGTGCTTATATCAGTAGCATTCTTGGCA
TTGGCCTTTGTGGTGGTGGGTGACCATGAGAAATGGCTGGCAATTGGAGTAACAATTATA
GGGACAACAATAATGGCTACAACTTTGGGTACAATGTGTTATTGGGTGATTAGGCATCGG
ATTGAAGCCAAAAAGATGAGAAGCGTCCGAAGGATGTCCATGCCCAGCAAGTCCAGATCC
TGGACTATGTCTGTCATGTCAGATTCTGAGATTCTAAATAATGAGTTTAAGAAAATGTAT
GCAATTTAG

Peptide Sequence

PEP ID

VIT_06s0004g03980.t01
PEP Infomation

pep chromosome:12X:6:4916077:4919403:-1 gene:VIT_06s0004g03980 transcript:VIT_06s0004g03980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSPAGHHYQSLPRKKMTKQLTGKRDDTPLHSAARAGQLEVVARTLSSAGEEELLELLSK
QNQSGETALYVAAEYGYVDVVREMIQYHDLSTASIKARNGYDAFHIAAKQGDLEVLKILM
EALPGLSLTEDVSNTTALHTAANQGYIEVVNLLLESGSGVAAIAKSNGKTALHSAARKGH
LEVIKALLEKEPGVATRIDKKGQTALHMAVKGQNLEVVEELMKADPSLVNMVDTKGNTAL
HIASRKGREQIVRKLLSHDETDTKAVNKSGETAFDTAEKTGNPNIATILQEHGVQSAKAM
KPQVTSTARELKQTVSDIKHEVHYQLEHTRQTRRRVQGIAKRLNKMHGEGLNNAINSTTV
VAVLIATVAFAAIFTVPGQYVDDPTNIPYGFSLGEANIAPKISFIIFFIFDSIALFISLA
VVVVQTSVVVIESKAKKQMMAIINKLMWLACVLISVAFLALAFVVVGDHEKWLAIGVTII
GTTIMATTLGTMCYWVIRHRIEAKKMRSVRRMSMPSKSRSWTMSVMSDSEILNNEFKKMY
AI

Transcript Sequence

Transcript ID

VIT_06s0004g03980.t01
Transcript Infomation

cdna chromosome:12X:6:4916077:4919403:-1 gene:VIT_06s0004g03980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCATGGCTTTTGGCCTCTAGCTATCGTTCCTTTTCTTGCTCCAATATAAAACAGCAAACC
ACTAGGCCCCATTAAAATGATGCGTTTTGGCTTGGTGATTCCATTCCCATGGTTCTGTAG
AGCTTGGATTTGAATTTTGTGGGGTGGTCTGGGATGGAGCGGAGCATGTGGGGGTTTTGT
TCGTTCACACCCAGGATATGCTACAACCAGGCATGGGGCATGGGTGTCAAAACCCCAGGT
TTCTGGGCTCTTTGAATTCTGGGGTGATCCAATCTTTTTGGTGGGTTGCTTTTAACAAAC
AATGACTCTTGGCCTGTTAAGAAATGCGGTTATTGATCTGGATTTCCAGGGAAGGAGAAG
TTCTGTCGTCATCCATTGCCATTAGACATTGCTGAGGAGGGAACATTTTGGTAGTTCAAT
AATGGATTCACCAGCTGGGCACCACTACCAGAGCCTACCCCGGAAAAAGATGACCAAACA
GTTGACGGGGAAACGCGACGATACTCCCCTGCATTCTGCAGCGAGAGCAGGACAACTAGA
GGTTGTGGCCCGGACCCTTTCCAGTGCTGGAGAAGAAGAATTGCTAGAGTTATTATCTAA
GCAAAACCAATCTGGTGAAACAGCACTTTACGTTGCTGCAGAATATGGGTATGTTGATGT
GGTTAGGGAGATGATACAGTACCATGATCTCAGTACTGCTAGCATCAAAGCAAGGAATGG
CTATGATGCATTCCACATTGCTGCTAAACAAGGGGATTTGGAGGTATTGAAAATACTAAT
GGAGGCCCTTCCGGGGCTCTCTTTGACTGAGGATGTATCAAATACCACTGCCTTGCACAC
TGCTGCAAATCAAGGGTATATTGAGGTGGTGAATTTGCTCTTGGAGTCAGGGAGTGGGGT
GGCTGCCATTGCTAAAAGTAATGGGAAAACAGCCCTGCACTCTGCCGCAAGAAAAGGGCA
TTTGGAAGTCATCAAAGCCCTTTTAGAGAAGGAGCCTGGGGTTGCTACACGAATTGATAA
GAAGGGCCAGACTGCACTACATATGGCTGTGAAGGGACAGAACCTTGAGGTGGTTGAGGA
GCTGATGAAGGCCGATCCTTCATTGGTAAACATGGTTGATACTAAGGGCAACACAGCATT
GCATATAGCCTCCCGGAAGGGCAGGGAACAGATTGTTAGGAAATTACTAAGTCATGATGA
AACCGATACAAAAGCTGTGAACAAGTCTGGGGAAACTGCCTTTGACACTGCAGAGAAGAC
TGGGAACCCCAACATTGCAACCATCCTGCAGGAGCACGGGGTTCAGAGTGCCAAAGCAAT
GAAGCCGCAAGTAACAAGCACAGCCCGTGAATTGAAACAAACTGTAAGCGACATAAAGCA
TGAAGTCCACTACCAGCTAGAACATACTCGGCAAACTAGGAGACGGGTGCAGGGCATTGC
CAAACGCCTCAACAAAATGCATGGAGAAGGTCTAAACAATGCAATCAACTCCACAACTGT
TGTTGCTGTCCTCATTGCCACCGTCGCCTTTGCAGCCATTTTCACTGTCCCTGGCCAATA
TGTTGATGACCCAACCAACATTCCTTATGGGTTTTCTCTTGGGGAAGCAAATATCGCTCC
CAAAATATCGTTCATCATTTTCTTTATATTTGACTCGATAGCCCTCTTCATTTCTTTGGC
TGTTGTGGTGGTGCAAACCTCAGTTGTGGTCATAGAGAGCAAGGCAAAGAAGCAGATGAT
GGCAATCATTAACAAGCTAATGTGGCTGGCTTGTGTGCTTATATCAGTAGCATTCTTGGC
ATTGGCCTTTGTGGTGGTGGGTGACCATGAGAAATGGCTGGCAATTGGAGTAACAATTAT
AGGGACAACAATAATGGCTACAACTTTGGGTACAATGTGTTATTGGGTGATTAGGCATCG
GATTGAAGCCAAAAAGATGAGAAGCGTCCGAAGGATGTCCATGCCCAGCAAGTCCAGATC
CTGGACTATGTCTGTCATGTCAGATTCTGAGATTCTAAATAATGAGTTTAAGAAAATGTA
TGCAATTTAGATTTATATACAT