Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03970.t01
CDS Infomation

cds chromosome:12X:6:4901278:4914945:-1 gene:VIT_06s0004g03970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGAAGAATTGCTGGAATTGCAGAGACAGTTGGAGTTTGCACAGCAAGTCAAATCG
AGTATTCGATTATCTGAACGAAACGTGGTGGAATTGGTCCAGAAACTCCACGAGCTTCGA
ATCATCGATTTCGACCTTCTCCACACCGTCTCCGGAAAAGAATACATCACTCCTGAGCAA
TTGAGGCATGAAATGGCAGCAGAAATCAAGAAATTAGGACGTGTTTCTTTGATTGATCTT
GCGGACTTTACTGGAGTTGACTTATACCATGTTGAAAATCAAGCGCAATGTATAGTCTCT
GATGATCCGGGCCTTACATTAATTCAAGGAGAAATAATATCAGATTCATATTGGGATAAT
GTAGCAGAAGAAATTAATGAGAGGCTTCAAGAATGTAGTCAAATTGCTTTGGCAGAACTT
GCTGCACAGTTACATGTTGGCTCAGAATTGCTCACGAGTATGTTGGAGCTTCGCATGGGG
ACTATGGTTAAAGGTAGACTTGAAGGTGGGCAATTGTATACCCCTGTGTATGTTGCCCGT
GTTAGTTCAATGGTTCGGGGAGCTGCAAGGGGTATCACTGTTCCAACAAATTTATCTGCA
TTGTGGAGTTCCTTACAGCAGCTACTACAAGAAATGAATGGATCAGGTGGTGTGGCAGTT
GAAGGTTCATTTTTCCAATCCCTGTTTAATGGGCTGGTGAAGGAAGGAGAGATCCTTGGA
TCCCTTCGTGCAGGAGTTCATTGGACACCAACTGTCTTTGCCATTGCTCAAAAGGAATCC
ATAGATTCTTTTTTTTCACAGAATTCTTTTATCAGCTACGAGGTTCTGCTCAAACTTGGA
ATTCCCCAGCCTCTCCAGTATCTGCAGTCCAGGTATCCTGATGGTATACCTCTAGTTACC
ATATTTGTTCATCCATCAATGATTGAGATGTTGGATACTTCTGCTGAGGATGCTATTGAA
CATGGTAGCTGGATCAATTCTCTTTCTATTTTACCAGCATCCTTCGGAGCCCAGGATGCA
AGCAAGATTTTGTCACTTTGCCCATCTGTTAAGTTGGCACTGAAGTCTAATAAAGCACTC
ATCCTGGGGGAAACTTATGTATTTAGCAATGGCTTTATCAAGGATGTGTTTGATCACATG
GAGAAGGAGATGGAAACCTTCAGTCTTTCAGGGCCTTCTATGGGCATGGTGTTTGAGGAT
TTGCACTCTGTCAAGGAAGTTAAAGCTGGACATGATTCAAGCAGGTTTACTGAGTTGAAT
GAACCTAGTAATGAGAGTGGCAGTAATAAACAGTCCATAGAAAAAGGGTCAAAAAGGAAA
AAGGGAAAGACCACAGGGAATACAAAGACAAGTGCTGCTGAAAGTGGCCCAGATAACCAG
GAATATGTTCCTACAAAGTCTAAGAAAAATCAAAGGAAAGGCAAGGATACATCTTCTTTG
CGAGTGTCAGATTCAAAAACTGGTTCTAAGAAAGAATCAGATAAAATGAAAGAGGACAAT
TTTAGCATTCCAGAAGAATGGGTTATGCAGAAGATCACAAAGATGGTTCCTGATTTTGAA
GAACAAGGTGTCGATGATCCTGAAATGATCCTTAGACCTTTAGCAGATTATTTGAGACCT
ATGCTGCTCAATTCATGGAAAGAAAGAAGAAGGGCATTGTTTACAGAGAATGCGGAGAGA
ATGAAGCGTGTGCTTGATAATTTACAGAAGAAACTTGATGAGTCTTTCTTAAATATGCAG
CTCTATGTAAAAGCACTAGATTTGTTTGAAGATGACCAATCAACCTCTGTTATTTTACAC
AAACATTTACTAAGAACAACAGCTGCCTCTATTGTGGACATGGTTTTACTTAATTTGGAT
GTGCATAACAAATTGAAGAATGGAATTGAAGTTGAAGAATCTCAGAATTCAGAGTCCATT
TCAGTTACTTCAGGAGAAAGAATTGCTCTTGCAAAGAGTTTGCCTGGATCTCTGTCAGCT
AGGGCCCTTGCACTAGTTGAAGCATTGGAAGGGAAGCGGGTGGAAATATTCATGACTTCA
CTGGATGAGATGGCAGAAGACAGTGGGTTACTCTTGAAAAAGCTTGATAAGAAATTGGAA
AGAACACTCCTGCATTCATATCGTAAGGATTTGACATCTCAAGTGTCTGCTGAAAGTGAC
CCTGTTTCCCTTCTACCAAAAGTTGTTTCTCTGCTTTATGTACAGATTCATAACAGAGCT
CTTCAAGCCCCTGGAAGGGCCATTTCTATTGCTGTTTCCCGATTGAAGGATAAGCTTGAT
GATTCAGCATACAATATCTTAATGGATTACCACACTGCAACGGTGACCCTTTTAGCACTG
ATGTCTGCTGCAACAGATGATGAACAAGATTGCACAGCGGATAGAATTTTGAGTAAACGG
GAACTTCTGGAGAGTTTAATGCCATCATTGAAAGGCTTGGTTTTGGGGACCTCACAATCT
TGA

Peptide Sequence

PEP ID

VIT_06s0004g03970.t01
PEP Infomation

pep chromosome:12X:6:4901278:4914945:-1 gene:VIT_06s0004g03970 transcript:VIT_06s0004g03970.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDEELLELQRQLEFAQQVKSSIRLSERNVVELVQKLHELRIIDFDLLHTVSGKEYITPEQ
LRHEMAAEIKKLGRVSLIDLADFTGVDLYHVENQAQCIVSDDPGLTLIQGEIISDSYWDN
VAEEINERLQECSQIALAELAAQLHVGSELLTSMLELRMGTMVKGRLEGGQLYTPVYVAR
VSSMVRGAARGITVPTNLSALWSSLQQLLQEMNGSGGVAVEGSFFQSLFNGLVKEGEILG
SLRAGVHWTPTVFAIAQKESIDSFFSQNSFISYEVLLKLGIPQPLQYLQSRYPDGIPLVT
IFVHPSMIEMLDTSAEDAIEHGSWINSLSILPASFGAQDASKILSLCPSVKLALKSNKAL
ILGETYVFSNGFIKDVFDHMEKEMETFSLSGPSMGMVFEDLHSVKEVKAGHDSSRFTELN
EPSNESGSNKQSIEKGSKRKKGKTTGNTKTSAAESGPDNQEYVPTKSKKNQRKGKDTSSL
RVSDSKTGSKKESDKMKEDNFSIPEEWVMQKITKMVPDFEEQGVDDPEMILRPLADYLRP
MLLNSWKERRRALFTENAERMKRVLDNLQKKLDESFLNMQLYVKALDLFEDDQSTSVILH
KHLLRTTAASIVDMVLLNLDVHNKLKNGIEVEESQNSESISVTSGERIALAKSLPGSLSA
RALALVEALEGKRVEIFMTSLDEMAEDSGLLLKKLDKKLERTLLHSYRKDLTSQVSAESD
PVSLLPKVVSLLYVQIHNRALQAPGRAISIAVSRLKDKLDDSAYNILMDYHTATVTLLAL
MSAATDDEQDCTADRILSKRELLESLMPSLKGLVLGTSQS

Transcript Sequence

Transcript ID

VIT_06s0004g03970.t01
Transcript Infomation

cdna chromosome:12X:6:4901278:4914945:-1 gene:VIT_06s0004g03970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGAAACCATGGACGAAGAATTGCTGGAATTGCAGAGACAGTTGGAGTTTGCACAGCAAGT
CAAATCGAGTATTCGATTATCTGAACGAAACGTGGTGGAATTGGTCCAGAAACTCCACGA
GCTTCGAATCATCGATTTCGACCTTCTCCACACCGTCTCCGGAAAAGAATACATCACTCC
TGAGCAATTGAGGCATGAAATGGCAGCAGAAATCAAGAAATTAGGACGTGTTTCTTTGAT
TGATCTTGCGGACTTTACTGGAGTTGACTTATACCATGTTGAAAATCAAGCGCAATGTAT
AGTCTCTGATGATCCGGGCCTTACATTAATTCAAGGAGAAATAATATCAGATTCATATTG
GGATAATGTAGCAGAAGAAATTAATGAGAGGCTTCAAGAATGTAGTCAAATTGCTTTGGC
AGAACTTGCTGCACAGTTACATGTTGGCTCAGAATTGCTCACGAGTATGTTGGAGCTTCG
CATGGGGACTATGGTTAAAGGTAGACTTGAAGGTGGGCAATTGTATACCCCTGTGTATGT
TGCCCGTGTTAGTTCAATGGTTCGGGGAGCTGCAAGGGGTATCACTGTTCCAACAAATTT
ATCTGCATTGTGGAGTTCCTTACAGCAGCTACTACAAGAAATGAATGGATCAGGTGGTGT
GGCAGTTGAAGGTTCATTTTTCCAATCCCTGTTTAATGGGCTGGTGAAGGAAGGAGAGAT
CCTTGGATCCCTTCGTGCAGGAGTTCATTGGACACCAACTGTCTTTGCCATTGCTCAAAA
GGAATCCATAGATTCTTTTTTTTCACAGAATTCTTTTATCAGCTACGAGGTTCTGCTCAA
ACTTGGAATTCCCCAGCCTCTCCAGTATCTGCAGTCCAGGTATCCTGATGGTATACCTCT
AGTTACCATATTTGTTCATCCATCAATGATTGAGATGTTGGATACTTCTGCTGAGGATGC
TATTGAACATGGTAGCTGGATCAATTCTCTTTCTATTTTACCAGCATCCTTCGGAGCCCA
GGATGCAAGCAAGATTTTGTCACTTTGCCCATCTGTTAAGTTGGCACTGAAGTCTAATAA
AGCACTCATCCTGGGGGAAACTTATGTATTTAGCAATGGCTTTATCAAGGATGTGTTTGA
TCACATGGAGAAGGAGATGGAAACCTTCAGTCTTTCAGGGCCTTCTATGGGCATGGTGTT
TGAGGATTTGCACTCTGTCAAGGAAGTTAAAGCTGGACATGATTCAAGCAGGTTTACTGA
GTTGAATGAACCTAGTAATGAGAGTGGCAGTAATAAACAGTCCATAGAAAAAGGGTCAAA
AAGGAAAAAGGGAAAGACCACAGGGAATACAAAGACAAGTGCTGCTGAAAGTGGCCCAGA
TAACCAGGAATATGTTCCTACAAAGTCTAAGAAAAATCAAAGGAAAGGCAAGGATACATC
TTCTTTGCGAGTGTCAGATTCAAAAACTGGTTCTAAGAAAGAATCAGATAAAATGAAAGA
GGACAATTTTAGCATTCCAGAAGAATGGGTTATGCAGAAGATCACAAAGATGGTTCCTGA
TTTTGAAGAACAAGGTGTCGATGATCCTGAAATGATCCTTAGACCTTTAGCAGATTATTT
GAGACCTATGCTGCTCAATTCATGGAAAGAAAGAAGAAGGGCATTGTTTACAGAGAATGC
GGAGAGAATGAAGCGTGTGCTTGATAATTTACAGAAGAAACTTGATGAGTCTTTCTTAAA
TATGCAGCTCTATGTAAAAGCACTAGATTTGTTTGAAGATGACCAATCAACCTCTGTTAT
TTTACACAAACATTTACTAAGAACAACAGCTGCCTCTATTGTGGACATGGTTTTACTTAA
TTTGGATGTGCATAACAAATTGAAGAATGGAATTGAAGTTGAAGAATCTCAGAATTCAGA
GTCCATTTCAGTTACTTCAGGAGAAAGAATTGCTCTTGCAAAGAGTTTGCCTGGATCTCT
GTCAGCTAGGGCCCTTGCACTAGTTGAAGCATTGGAAGGGAAGCGGGTGGAAATATTCAT
GACTTCACTGGATGAGATGGCAGAAGACAGTGGGTTACTCTTGAAAAAGCTTGATAAGAA
ATTGGAAAGAACACTCCTGCATTCATATCGTAAGGATTTGACATCTCAAGTGTCTGCTGA
AAGTGACCCTGTTTCCCTTCTACCAAAAGTTGTTTCTCTGCTTTATGTACAGATTCATAA
CAGAGCTCTTCAAGCCCCTGGAAGGGCCATTTCTATTGCTGTTTCCCGATTGAAGGATAA
GCTTGATGATTCAGCATACAATATCTTAATGGATTACCACACTGCAACGGTGACCCTTTT
AGCACTGATGTCTGCTGCAACAGATGATGAACAAGATTGCACAGCGGATAGAATTTTGAG
TAAACGGGAACTTCTGGAGAGTTTAATGCCATCATTGAAAGGCTTGGTTTTGGGGACCTC
ACAATCTTGATTCCCAATAAAATTAAAATCCTGAAGAACAAAGTTAAACAGAAAGAAGCC
TTCATTTTTAGATAGGTGAGGTGAAGTGTGGATTGATTTGTACCCGCATCTGCAGCTCAT
CTTTTAAACTCAAGAGGGGCAGAAATAGATATTCTCCTAATTTCAAATAATAGTTAATTT
TTTATTTACCAGTTCTTTGGTGCAAGGCATCTAGTGTGATGATATTGTTATGTATAAAGT
ATTAACCAGTTTGAAGAGCAGCCATACCATTAGCATTTGT