Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03920.t01
CDS Infomation

cds chromosome:12X:6:4842068:4845184:-1 gene:VIT_06s0004g03920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTGTGGGAAAATTGGATTATTGGTCATCTGGGTTTCATCAGTATTGTGTTTGGCA
TGCTGTAGTGGGTCTCAGGATGATTATCTTATCGATTGTGGATCAACCACCAATACTTCG
GTGGCTGGTCGCGTTTTTCTTGCTGATACCTCGAGTTACCTTTCCACACCTGAAAAACTT
TTGGCCAATACTGCCACGAAATCTGACTCATCCTCTGATGATTTGCCGCTCTACCAGACG
GCAAGGATCTTTACTGGAACCTCTAAGTACACGTTTTCGGTCGGGAGCAATAGGCGATAC
TGGATCCGCCTTTATTTCTTCCCATTTGTTTATGATACCTATAACATGAGCACTGCTAAT
TTCTCTGTTTCCACCCAAAATCATGTCCTTATAAGCAACTTCAGTCCGAAGGCTGGTTCT
GCTATGAAGGAATTCTCTGAAAATGTGACTTCAGATACCCTTGTTATTACCTTCGCTCCT
TCCAGCAATTCATTTGCTTTCTTGAATGCCTTAGAAGTTGTTTCTGTACCAAATGAGCTG
ATTAGTGATGATGCCATCACCATCACGCCGTCAGGGAAGTTCAAGGGTCTTGTGACACAG
GCCCTGGAGACGGTTGCAAGGGTGAATATGGGAGGACCAACGGTCACCTCTGAGAACGAT
ACCCTTTGGCGAACTTGGCTTCCTGATCAGAATTTCTTGGTAGAGAATAATCTTGCAACC
AATGTATCAAAAATTGGAGCTGTCATATATGCGAAAGGGGGGCCTACAAAGCTTATTGCT
CCGGCTTCTGTCTATGGTACTGCCACTAAGATGAACTCAGATGCTAATCCTCAGTACAAT
TTCAACGTGACATGGGAGTTCGATGTGGATCCAGGGTTTCAGTACCTTGTTCGGTATCAC
TTTTGTGATATCGTGAGTATATCTCTCAACCAGCTATACTTCAATGTTTATCTGGACTCC
TACCTTGTCTATGAGGAGCTGGATCTCAGTACTTTGGCATTTAACATTTTAGGTGCTCCA
TATTATTTAGACGTTGTCACAGGAACAAGGGTTGGCAGCAAGCTTCGTGTAAGTATTGGA
CCGTCTTCCATACATACTGAGTATCCTGATGCCATTCTAAATGGGTTGGAGATCATGAAA
ATGAACAGTTCTATGGGCAGCCTTAGTGGATCTGTGATTGTCTCAAACCCAAGCTCAAAA
AAGAATGTTGCAGTGGTAATTGGCGCAAGTGTTGGGGTGTTTGCTGCATTGATATTGGCT
GGTGTTTTCTTTCTGGTGTACAGAAGAAGAAGAAAACTGGCACGTCAAGGCCATTCAAAG
ACATGGATGGCTTTCTCCACTAATGGAGGGAATTCTCACACGATGGGAAGTAAATACTCT
AATGGAACAATTGCAAGTGCTGGTTCTAACTTTGGGTATCGAATTCCCTTTCTGGCAGTT
CAAGAGGCTACAAACAACTTTGATGAGAGTTGGGTTATTGGAATTGGTGGTTTTGGAAAA
GTTTACAAGGGGACTTTAAATGATGGTACAAAAGTAGCTGTTAAAAGAGGAAATCCCAGG
TCCCAGCAGGGTCTTGCAGAGTTTCAAACCGAAATTGAGATGCTATCTCAGTTCCGCCAC
CGCCATTTAGTTTCATTAATTGGGTATTGTGATGAAAAAAATGAGATGATTTTGATATAT
GAATATATGGAGAATGGAACCGTCAAGAGCCATCTCTATGGCTCGGGTCTTCCCAGTTTG
GATTGGAAGGAGAGGCTTGAGATATGCATCGGGGCTGCCAGAGGACTTCACTACCTTCAC
ACTGGCTATGCAAAAGCAGTTATTCATCGTGATGTAAAGTCTGCAAATATCTTGCTTGAT
GAGAATCTTATGGCTAAAGTCGCTGATTTTGGGCTTTCAAAAACTGGACCTGAGATTGAT
CAGACCCATGTTAGTACGGCTGTGAAAGGGAGTTTTGGGTACCTTGATCCTGAATATTTC
AGGAGGCAACAGTTGACAGAGAAATCTGATGTGTATTCATTTGGGGTGGTTTTGTTTGAA
GTACTTTGTGCAAGACCTGTTATTGATCCAACCCTTCCAAGGGAAATGGTGAACTTAGCT
GAGTGGGCAATGAAGTGGCAGAAGAGAGGCCAGTTGGAACAGATCATAGACCCTAACCTT
GTGGGAAAAATCAGACCAGATTCCCTCAGAAAGTTTGGAGAAACGGCTGAGAAATGCTTG
TCTGACTTTGGTGTTGACAGGCCTTCCATGGGTGACATCTTGTGGAATCTGGAGTATGCG
CTTCAACTTCAAGAAGCAGTTCTTGTAGGTGATCCTGAAGAAAACAGTACTAATCTGATT
GGAGAGCTTGCTCCACAAGTCAACAATTTCAATCATGCTGACACTAGTGTTTCTGCTGCT
CAGTTTGAAGTGTCAAGCGTGGACGATCTTTCTGGTATCTCAATGAGCAGGGAGGGGTGA

Peptide Sequence

PEP ID

VIT_06s0004g03920.t01
PEP Infomation

pep chromosome:12X:6:4842068:4845184:-1 gene:VIT_06s0004g03920 transcript:VIT_06s0004g03920.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGCGKIGLLVIWVSSVLCLACCSGSQDDYLIDCGSTTNTSVAGRVFLADTSSYLSTPEKL
LANTATKSDSSSDDLPLYQTARIFTGTSKYTFSVGSNRRYWIRLYFFPFVYDTYNMSTAN
FSVSTQNHVLISNFSPKAGSAMKEFSENVTSDTLVITFAPSSNSFAFLNALEVVSVPNEL
ISDDAITITPSGKFKGLVTQALETVARVNMGGPTVTSENDTLWRTWLPDQNFLVENNLAT
NVSKIGAVIYAKGGPTKLIAPASVYGTATKMNSDANPQYNFNVTWEFDVDPGFQYLVRYH
FCDIVSISLNQLYFNVYLDSYLVYEELDLSTLAFNILGAPYYLDVVTGTRVGSKLRVSIG
PSSIHTEYPDAILNGLEIMKMNSSMGSLSGSVIVSNPSSKKNVAVVIGASVGVFAALILA
GVFFLVYRRRRKLARQGHSKTWMAFSTNGGNSHTMGSKYSNGTIASAGSNFGYRIPFLAV
QEATNNFDESWVIGIGGFGKVYKGTLNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRH
RHLVSLIGYCDEKNEMILIYEYMENGTVKSHLYGSGLPSLDWKERLEICIGAARGLHYLH
TGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYF
RRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKRGQLEQIIDPNL
VGKIRPDSLRKFGETAEKCLSDFGVDRPSMGDILWNLEYALQLQEAVLVGDPEENSTNLI
GELAPQVNNFNHADTSVSAAQFEVSSVDDLSGISMSREG

Transcript Sequence

Transcript ID

VIT_06s0004g03920.t01
Transcript Infomation

cdna chromosome:12X:6:4842068:4845184:-1 gene:VIT_06s0004g03920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGATCCGAAAGGTGCCATTTTTTCTCTTCTTTGTTCAGTTCTTTCGATGGGTTTTCAATT
TCAATTGTTCTTGTGATTGGTCACTAGGAGTTTCTGTATTGCTTTGTTGTATAAACCCTG
GATTTCAGTTCCTTAAAGAATTTCTATTTGTTTTCCTGTTTTCTGATGATGGGTTGTGGG
AAAATTGGATTATTGGTCATCTGGGTTTCATCAGTATTGTGTTTGGCATGCTGTAGTGGG
TCTCAGGATGATTATCTTATCGATTGTGGATCAACCACCAATACTTCGGTGGCTGGTCGC
GTTTTTCTTGCTGATACCTCGAGTTACCTTTCCACACCTGAAAAACTTTTGGCCAATACT
GCCACGAAATCTGACTCATCCTCTGATGATTTGCCGCTCTACCAGACGGCAAGGATCTTT
ACTGGAACCTCTAAGTACACGTTTTCGGTCGGGAGCAATAGGCGATACTGGATCCGCCTT
TATTTCTTCCCATTTGTTTATGATACCTATAACATGAGCACTGCTAATTTCTCTGTTTCC
ACCCAAAATCATGTCCTTATAAGCAACTTCAGTCCGAAGGCTGGTTCTGCTATGAAGGAA
TTCTCTGAAAATGTGACTTCAGATACCCTTGTTATTACCTTCGCTCCTTCCAGCAATTCA
TTTGCTTTCTTGAATGCCTTAGAAGTTGTTTCTGTACCAAATGAGCTGATTAGTGATGAT
GCCATCACCATCACGCCGTCAGGGAAGTTCAAGGGTCTTGTGACACAGGCCCTGGAGACG
GTTGCAAGGGTGAATATGGGAGGACCAACGGTCACCTCTGAGAACGATACCCTTTGGCGA
ACTTGGCTTCCTGATCAGAATTTCTTGGTAGAGAATAATCTTGCAACCAATGTATCAAAA
ATTGGAGCTGTCATATATGCGAAAGGGGGGCCTACAAAGCTTATTGCTCCGGCTTCTGTC
TATGGTACTGCCACTAAGATGAACTCAGATGCTAATCCTCAGTACAATTTCAACGTGACA
TGGGAGTTCGATGTGGATCCAGGGTTTCAGTACCTTGTTCGGTATCACTTTTGTGATATC
GTGAGTATATCTCTCAACCAGCTATACTTCAATGTTTATCTGGACTCCTACCTTGTCTAT
GAGGAGCTGGATCTCAGTACTTTGGCATTTAACATTTTAGGTGCTCCATATTATTTAGAC
GTTGTCACAGGAACAAGGGTTGGCAGCAAGCTTCGTGTAAGTATTGGACCGTCTTCCATA
CATACTGAGTATCCTGATGCCATTCTAAATGGGTTGGAGATCATGAAAATGAACAGTTCT
ATGGGCAGCCTTAGTGGATCTGTGATTGTCTCAAACCCAAGCTCAAAAAAGAATGTTGCA
GTGGTAATTGGCGCAAGTGTTGGGGTGTTTGCTGCATTGATATTGGCTGGTGTTTTCTTT
CTGGTGTACAGAAGAAGAAGAAAACTGGCACGTCAAGGCCATTCAAAGACATGGATGGCT
TTCTCCACTAATGGAGGGAATTCTCACACGATGGGAAGTAAATACTCTAATGGAACAATT
GCAAGTGCTGGTTCTAACTTTGGGTATCGAATTCCCTTTCTGGCAGTTCAAGAGGCTACA
AACAACTTTGATGAGAGTTGGGTTATTGGAATTGGTGGTTTTGGAAAAGTTTACAAGGGG
ACTTTAAATGATGGTACAAAAGTAGCTGTTAAAAGAGGAAATCCCAGGTCCCAGCAGGGT
CTTGCAGAGTTTCAAACCGAAATTGAGATGCTATCTCAGTTCCGCCACCGCCATTTAGTT
TCATTAATTGGGTATTGTGATGAAAAAAATGAGATGATTTTGATATATGAATATATGGAG
AATGGAACCGTCAAGAGCCATCTCTATGGCTCGGGTCTTCCCAGTTTGGATTGGAAGGAG
AGGCTTGAGATATGCATCGGGGCTGCCAGAGGACTTCACTACCTTCACACTGGCTATGCA
AAAGCAGTTATTCATCGTGATGTAAAGTCTGCAAATATCTTGCTTGATGAGAATCTTATG
GCTAAAGTCGCTGATTTTGGGCTTTCAAAAACTGGACCTGAGATTGATCAGACCCATGTT
AGTACGGCTGTGAAAGGGAGTTTTGGGTACCTTGATCCTGAATATTTCAGGAGGCAACAG
TTGACAGAGAAATCTGATGTGTATTCATTTGGGGTGGTTTTGTTTGAAGTACTTTGTGCA
AGACCTGTTATTGATCCAACCCTTCCAAGGGAAATGGTGAACTTAGCTGAGTGGGCAATG
AAGTGGCAGAAGAGAGGCCAGTTGGAACAGATCATAGACCCTAACCTTGTGGGAAAAATC
AGACCAGATTCCCTCAGAAAGTTTGGAGAAACGGCTGAGAAATGCTTGTCTGACTTTGGT
GTTGACAGGCCTTCCATGGGTGACATCTTGTGGAATCTGGAGTATGCGCTTCAACTTCAA
GAAGCAGTTCTTGTAGGTGATCCTGAAGAAAACAGTACTAATCTGATTGGAGAGCTTGCT
CCACAAGTCAACAATTTCAATCATGCTGACACTAGTGTTTCTGCTGCTCAGTTTGAAGTG
TCAAGCGTGGACGATCTTTCTGGTATCTCAATGAGCAGGGAGGGGTGATAGTTCATTTGA
GTTGTTTCACATCATTGATAAGGGTAGTGCATCTCATTTAGTATGTTGTTGTGTCTTGAT
ATTACAATTTTCTATGAAGTAACTTGGTTTTCGATGCA