Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03840.t01
CDS Infomation

cds chromosome:12X:6:4801144:4802357:1 gene:VIT_06s0004g03840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCTCCTTAAGCTTTTTATCTCCCTTTTCATTCTCCAAGCTCTCTGCATCTCCCCG
AGATCAATGCAAGCAGCTGCCCAGAACTCTAAACTCTTTCGAGAATACATTGGAGCACAA
TTTAACAATGTCAAATTTAGCGATGTCCCCATCAACCCAGATGTTGAATTCCACTTCATT
CTCGCCTTTGCAATAGACTACTCCAGCCCTAGTACTTCTTCAAACTTTCCCACCAATGGA
AAATTCAATATCTTCTGGGACGAACAGTATCTCACCCCCGCCCACGTTTCTTCCATCAAG
AGTCGTCATTCAAACGTCAAAGTAGGTCTCAGCCTAGGAGGGGCTACTGTGGGAGGCAAG
CCTGTTTACTTCAAGCCTTCCTCAGTGGATTCCTGGGTTTCTAATGCTGTTACTTCTCTC
ACCAAAATCATCAAACAGTTCCATTTGGATGGAATTGATGTTGATTATGAGCAATTCAGT
GCTGATCCCGATTCCTTTACCCATTGCATTGGACGCCTTATAACAACCCTCAAGAACAAT
GGCGTTATCTCATATGCGTCTATAGCTCCCTACAACGATGATCAGGCTCAGAGCCATTAC
AAGGCTCTCTGGAGGAGCTATGGGCATCACATAGATTATGTGAACTTCCAGTTCTACTCA
TACGATACGTCCACCACTGTCACTCAATTTCTGAAGTATTTTGAGGAGCAGAGCTCTAAT
TATGAAGGAGGTAAGGTGCTGGTGAGCTTCCTCAGCCATGAGAGTGGTGGGTTAGCTCCA
AATAAAGGCTTCTTTACTGCTTGTGAGAGGCTCAAGAGCCAGCACAAGCTCCATGGCATC
TTTGTTTGGTGCGCAGATGACTCCCTGGCAAACGGGTTCCCCTATGAGAAGAAAGCGCAG
TCGCTTTTAGCATCTGCAAGCTAA

Peptide Sequence

PEP ID

VIT_06s0004g03840.t01
PEP Infomation

pep chromosome:12X:6:4801144:4802357:1 gene:VIT_06s0004g03840 transcript:VIT_06s0004g03840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLLKLFISLFILQALCISPRSMQAAAQNSKLFREYIGAQFNNVKFSDVPINPDVEFHFI
LAFAIDYSSPSTSSNFPTNGKFNIFWDEQYLTPAHVSSIKSRHSNVKVGLSLGGATVGGK
PVYFKPSSVDSWVSNAVTSLTKIIKQFHLDGIDVDYEQFSADPDSFTHCIGRLITTLKNN
GVISYASIAPYNDDQAQSHYKALWRSYGHHIDYVNFQFYSYDTSTTVTQFLKYFEEQSSN
YEGGKVLVSFLSHESGGLAPNKGFFTACERLKSQHKLHGIFVWCADDSLANGFPYEKKAQ
SLLASAS

Transcript Sequence

Transcript ID

VIT_06s0004g03840.t01
Transcript Infomation

cdna chromosome:12X:6:4801144:4802357:1 gene:VIT_06s0004g03840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGATGTATGTAGCAGATTCGCTATAGATCTTGAAGACCATGCCTGCAGAAACACACAACC
AGATTGACCTGTTTTAATTCCCTTATTGCCCTCACCTTCATAGTCACCACAGTATATATT
TGCGTCCAACAATAGCCATGGATCTCCTTAAGCTTTTTATCTCCCTTTTCATTCTCCAAG
CTCTCTGCATCTCCCCGAGATCAATGCAAGCAGCTGCCCAGAACTCTAAACTCTTTCGAG
AATACATTGGAGCACAATTTAACAATGTCAAATTTAGCGATGTCCCCATCAACCCAGATG
TTGAATTCCACTTCATTCTCGCCTTTGCAATAGACTACTCCAGCCCTAGTACTTCTTCAA
ACTTTCCCACCAATGGAAAATTCAATATCTTCTGGGACGAACAGTATCTCACCCCCGCCC
ACGTTTCTTCCATCAAGAGTCGTCATTCAAACGTCAAAGTAGGTCTCAGCCTAGGAGGGG
CTACTGTGGGAGGCAAGCCTGTTTACTTCAAGCCTTCCTCAGTGGATTCCTGGGTTTCTA
ATGCTGTTACTTCTCTCACCAAAATCATCAAACAGTTCCATTTGGATGGAATTGATGTTG
ATTATGAGCAATTCAGTGCTGATCCCGATTCCTTTACCCATTGCATTGGACGCCTTATAA
CAACCCTCAAGAACAATGGCGTTATCTCATATGCGTCTATAGCTCCCTACAACGATGATC
AGGCTCAGAGCCATTACAAGGCTCTCTGGAGGAGCTATGGGCATCACATAGATTATGTGA
ACTTCCAGTTCTACTCATACGATACGTCCACCACTGTCACTCAATTTCTGAAGTATTTTG
AGGAGCAGAGCTCTAATTATGAAGGAGGTAAGGTGCTGGTGAGCTTCCTCAGCCATGAGA
GTGGTGGGTTAGCTCCAAATAAAGGCTTCTTTACTGCTTGTGAGAGGCTCAAGAGCCAGC
ACAAGCTCCATGGCATCTTTGTTTGGTGCGCAGATGACTCCCTGGCAAACGGGTTCCCCT
ATGAGAAGAAAGCGCAGTCGCTTTTAGCATCTGCAAGCTAAAATCATAATCTATTTGGAA
TTGCCATTAGGCTTGAACAATTATCTACTGTAACCGTATTTCAGATTGTGTTCCACATGT
TTGTCAGAATGCTTCAATAAAGTTGTTCCCCGCGTTTTTGTGTTTGTGCTCTATAA