Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03790.t01
CDS Infomation

cds chromosome:12X:6:4762503:4766209:-1 gene:VIT_06s0004g03790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGGCATCATGGAGCCAGGCGAAAACGATTCAACAAAGTGGATGCTTCAGATAGTT
GATATCGATAATATGGAGGAGGTTCCCATTAATGACGGTGATCAGGTGAGGAGCTCCACC
GCAGAATCTCAAAATGGGGAGACTTCTCTGAATGAGAGTGAAAGCATTGTAAAAAGGAGG
AACGAAGCTCAGGGAAAGGTCCCTGGTTTGGGAAGGTCTACGTCCGGAGCTGCAAGAGGG
CTTAACAGCTTACGGTTTCTCGATAGGACAACCACGGGGAAGGAAGGGGATGCGTGGAAG
CCTGTCCAGAAACGCTTCAAGCAACATGCAGTTGAGGGAAAGCTCTACAAAGAAAAATTT
GGAGTCTGTATCGGAATGGGGGATTCAAAGGAATTCGCTGGGGAGCTGTTTGATGCCTTG
GCGAGACGCAGAAAGATTAACACAGAAAATGGGATATCTGAGGAAGAATTGAGACAGTTT
TGGGAAGACATGACCGATCGAGACCTTGATTCCAGACTTCAAATTTTCTTTGACATGTGT
GACAAGAATGGTGATGGAAAACTTTCAGAGGATGAAGTAAAGGAGGTGATAATGTTGAGT
GCCTCCACAAACAAGCTATCAAATCTTAAGCAACATGCAGCCGAATATGCAGCTTTAATC
ATGGAAGAGCTTGATCCTGACAATCATGGTCACATAGAGATGTGGCAACTAGAAACTCTA
TTAAGAGGAATGGTGGGTGGCTCTGAAGAAGGCCCCAAGTTCAACAAGAGAGCCCAAACG
CTATCAAGAACCATGATCCCGAAAAAATACAGGACTCCAGTTAGCAAACATCTATCTAAA
ACCCAAGAATTTCTCCAGGACAACTGGAAGAGGGTTTGGCTTGTCACATTATGGCTCTCC
ATAAACTTGACGCTCTTCATTTGGAAGTTCAATCAATACAAGACAAAAAAGGCATTCAAG
ATCATGGGTTACTGTCTCTGCACTGCCAAGGGTGCTGCTGAGACCCTCAAATTCAATATG
GCTCTCATTCTCATTCCTGTCTGTAGAAGAACCCTAACTAAGCTCAGATCAACATTTCTC
AGCGCCTTAATCCCTTTCGATGACAACATAAACTTCCACAAGTTAATTGCTCTGGCAATC
GCAATTGGGGTTTTTATCCATACCATAATGCATGTAACCTGTGATTTTCCAAGATTGATT
TCATGTCCACCCCGGAAGTTCAGGAGGATTCTTGGACCTCAGTTCAACTTCAAGCAGCCA
ACTTATGGCGACCTGCTGGAAAGTATTACAGGCACAACTGGGATTCTCATGATTGTTATG
ATGAGTTTCTCCTTCACACTGGCAACTCACTCTTTTAGGAGGAATGTTATCAAGCTTCCA
TGGCCATTCCACCATTTGGCTGGATTTAATGCCTTCTGGTATGCACATCATTTGCTGGTC
CTCGTCTATGTTCTCTTGGTCATCCATGGCTACTTCCTGATTCTCAGTAGGAACTGGTAC
ATGAAGACGACATGGATGTACGTCATGGTCCCTGTACTCTTCTACGCCAGTGAGAGAACA
CTCACCTCAGTTCATGAGCACAATCACCAGGTTGGCATAATCAAGGCTACAATTTACACA
GGAAATGTTCTAGCACTATACATGACCAAACCTCCCGGATTCAAGTACAAGAGTGGAATG
TATCTATTTGTCAAGTGTCCAGATGTATCAAATTTTGAATGGCATCCCTTCTCTATCACT
TCTGCCCCAGGAAATGACTACTTGAGCGTCCACATTCGAACCTTGGGAGACTGGACTACA
GAGATCAAAAACAGATTTGCAAAGGTTTGCGAACCTCCATCTGCACAACCGAAAAAGGGG
GCTCTAATGAGAATGGAAACCAGAGCAGCAACAGAAACCGGCGATGTACAAGCAGGATTT
CCAAGGATCATCATCAAAGGACCTTATGGAGCCCCTGCTCAGAACTACAAGAAGTATGAT
ATCCTCTTGCTGATTGGCCTGGGAATTGGAGCTACTCCATTCATCAGCATTATGAAAGAC
CTCCTTAATGACATCAAGCCAAATGATTCGGTGAGTCAAAAAGCAAGCTATGTCTCCAAA
TTTGATTCATCCTACAGCGACGCGCATGAGGCAACTAAAAAGGGTCCTGAAAGAGTGTAT
TTCTATTGGGTGACAAGGGAACAAGGCTCCTTTGAATGGTTTAAAGGTGTCATGAACGAT
GTTGCAGAGTATGACCATGGTCATATGATAGAAATGCACAACTACTTGACCAGCATGTAT
GAAGAAGGAGATGCACGGTCTGCACTTATTGCCATGGTGCAGTCACTGCAGCATGCCAAG
AATGGAGTTGATGTCGTCTCAGAAAGCCGGATCAAGGCGCATTTTGCAAGACCCAATTGG
AAAAAGGTGTTTAGTCACTTGGCGAGTACTCACCAATCTGCTAAAATAGGTGTCTTCTAT
TGTGGAAGTCCGACCCTCGCCAAACCACTGAGGCAGCTCTGCAAAGAGTTCAGTCTAAAT
TCATCAACACGATTTCATTTTCACAAGGAGAACTTCTAG

Peptide Sequence

PEP ID

VIT_06s0004g03790.t01
PEP Infomation

pep chromosome:12X:6:4762503:4766209:-1 gene:VIT_06s0004g03790 transcript:VIT_06s0004g03790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGIMEPGENDSTKWMLQIVDIDNMEEVPINDGDQVRSSTAESQNGETSLNESESIVKRR
NEAQGKVPGLGRSTSGAARGLNSLRFLDRTTTGKEGDAWKPVQKRFKQHAVEGKLYKEKF
GVCIGMGDSKEFAGELFDALARRRKINTENGISEEELRQFWEDMTDRDLDSRLQIFFDMC
DKNGDGKLSEDEVKEVIMLSASTNKLSNLKQHAAEYAALIMEELDPDNHGHIEMWQLETL
LRGMVGGSEEGPKFNKRAQTLSRTMIPKKYRTPVSKHLSKTQEFLQDNWKRVWLVTLWLS
INLTLFIWKFNQYKTKKAFKIMGYCLCTAKGAAETLKFNMALILIPVCRRTLTKLRSTFL
SALIPFDDNINFHKLIALAIAIGVFIHTIMHVTCDFPRLISCPPRKFRRILGPQFNFKQP
TYGDLLESITGTTGILMIVMMSFSFTLATHSFRRNVIKLPWPFHHLAGFNAFWYAHHLLV
LVYVLLVIHGYFLILSRNWYMKTTWMYVMVPVLFYASERTLTSVHEHNHQVGIIKATIYT
GNVLALYMTKPPGFKYKSGMYLFVKCPDVSNFEWHPFSITSAPGNDYLSVHIRTLGDWTT
EIKNRFAKVCEPPSAQPKKGALMRMETRAATETGDVQAGFPRIIIKGPYGAPAQNYKKYD
ILLLIGLGIGATPFISIMKDLLNDIKPNDSVSQKASYVSKFDSSYSDAHEATKKGPERVY
FYWVTREQGSFEWFKGVMNDVAEYDHGHMIEMHNYLTSMYEEGDARSALIAMVQSLQHAK
NGVDVVSESRIKAHFARPNWKKVFSHLASTHQSAKIGVFYCGSPTLAKPLRQLCKEFSLN
SSTRFHFHKENF

Transcript Sequence

Transcript ID

VIT_06s0004g03790.t01
Transcript Infomation

cdna chromosome:12X:6:4762503:4766209:-1 gene:VIT_06s0004g03790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGGCATCATGGAGCCAGGCGAAAACGATTCAACAAAGTGGATGCTTCAGATAGTT
GATATCGATAATATGGAGGAGGTTCCCATTAATGACGGTGATCAGGTGAGGAGCTCCACC
GCAGAATCTCAAAATGGGGAGACTTCTCTGAATGAGAGTGAAAGCATTGTAAAAAGGAGG
AACGAAGCTCAGGGAAAGGTCCCTGGTTTGGGAAGGTCTACGTCCGGAGCTGCAAGAGGG
CTTAACAGCTTACGGTTTCTCGATAGGACAACCACGGGGAAGGAAGGGGATGCGTGGAAG
CCTGTCCAGAAACGCTTCAAGCAACATGCAGTTGAGGGAAAGCTCTACAAAGAAAAATTT
GGAGTCTGTATCGGAATGGGGGATTCAAAGGAATTCGCTGGGGAGCTGTTTGATGCCTTG
GCGAGACGCAGAAAGATTAACACAGAAAATGGGATATCTGAGGAAGAATTGAGACAGTTT
TGGGAAGACATGACCGATCGAGACCTTGATTCCAGACTTCAAATTTTCTTTGACATGTGT
GACAAGAATGGTGATGGAAAACTTTCAGAGGATGAAGTAAAGGAGGTGATAATGTTGAGT
GCCTCCACAAACAAGCTATCAAATCTTAAGCAACATGCAGCCGAATATGCAGCTTTAATC
ATGGAAGAGCTTGATCCTGACAATCATGGTCACATAGAGATGTGGCAACTAGAAACTCTA
TTAAGAGGAATGGTGGGTGGCTCTGAAGAAGGCCCCAAGTTCAACAAGAGAGCCCAAACG
CTATCAAGAACCATGATCCCGAAAAAATACAGGACTCCAGTTAGCAAACATCTATCTAAA
ACCCAAGAATTTCTCCAGGACAACTGGAAGAGGGTTTGGCTTGTCACATTATGGCTCTCC
ATAAACTTGACGCTCTTCATTTGGAAGTTCAATCAATACAAGACAAAAAAGGCATTCAAG
ATCATGGGTTACTGTCTCTGCACTGCCAAGGGTGCTGCTGAGACCCTCAAATTCAATATG
GCTCTCATTCTCATTCCTGTCTGTAGAAGAACCCTAACTAAGCTCAGATCAACATTTCTC
AGCGCCTTAATCCCTTTCGATGACAACATAAACTTCCACAAGTTAATTGCTCTGGCAATC
GCAATTGGGGTTTTTATCCATACCATAATGCATGTAACCTGTGATTTTCCAAGATTGATT
TCATGTCCACCCCGGAAGTTCAGGAGGATTCTTGGACCTCAGTTCAACTTCAAGCAGCCA
ACTTATGGCGACCTGCTGGAAAGTATTACAGGCACAACTGGGATTCTCATGATTGTTATG
ATGAGTTTCTCCTTCACACTGGCAACTCACTCTTTTAGGAGGAATGTTATCAAGCTTCCA
TGGCCATTCCACCATTTGGCTGGATTTAATGCCTTCTGGTATGCACATCATTTGCTGGTC
CTCGTCTATGTTCTCTTGGTCATCCATGGCTACTTCCTGATTCTCAGTAGGAACTGGTAC
ATGAAGACGACATGGATGTACGTCATGGTCCCTGTACTCTTCTACGCCAGTGAGAGAACA
CTCACCTCAGTTCATGAGCACAATCACCAGGTTGGCATAATCAAGGCTACAATTTACACA
GGAAATGTTCTAGCACTATACATGACCAAACCTCCCGGATTCAAGTACAAGAGTGGAATG
TATCTATTTGTCAAGTGTCCAGATGTATCAAATTTTGAATGGCATCCCTTCTCTATCACT
TCTGCCCCAGGAAATGACTACTTGAGCGTCCACATTCGAACCTTGGGAGACTGGACTACA
GAGATCAAAAACAGATTTGCAAAGGTTTGCGAACCTCCATCTGCACAACCGAAAAAGGGG
GCTCTAATGAGAATGGAAACCAGAGCAGCAACAGAAACCGGCGATGTACAAGCAGGATTT
CCAAGGATCATCATCAAAGGACCTTATGGAGCCCCTGCTCAGAACTACAAGAAGTATGAT
ATCCTCTTGCTGATTGGCCTGGGAATTGGAGCTACTCCATTCATCAGCATTATGAAAGAC
CTCCTTAATGACATCAAGCCAAATGATTCGGTGAGTCAAAAAGCAAGCTATGTCTCCAAA
TTTGATTCATCCTACAGCGACGCGCATGAGGCAACTAAAAAGGGTCCTGAAAGAGTGTAT
TTCTATTGGGTGACAAGGGAACAAGGCTCCTTTGAATGGTTTAAAGGTGTCATGAACGAT
GTTGCAGAGTATGACCATGGTCATATGATAGAAATGCACAACTACTTGACCAGCATGTAT
GAAGAAGGAGATGCACGGTCTGCACTTATTGCCATGGTGCAGTCACTGCAGCATGCCAAG
AATGGAGTTGATGTCGTCTCAGAAAGCCGGATCAAGGCGCATTTTGCAAGACCCAATTGG
AAAAAGGTGTTTAGTCACTTGGCGAGTACTCACCAATCTGCTAAAATAGGTGTCTTCTAT
TGTGGAAGTCCGACCCTCGCCAAACCACTGAGGCAGCTCTGCAAAGAGTTCAGTCTAAAT
TCATCAACACGATTTCATTTTCACAAGGAGAACTTCTAG