Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03710.t01
CDS Infomation

cds chromosome:12X:6:4676213:4678504:1 gene:VIT_06s0004g03710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATAAAGCAAGGATTCATCTCTGACCCGACCATCACCTTCTCTCCCTCCAGACCACTT
TCTAGGGTTTCTCTCTCTCCTCCTCCTCCCTCTGCTTCCCCCTCCAAGAGTCCAACTCTC
TTCGAGATGATGTCCGAGGAGCAGAGTCGCGAGTCTAGACACTCCGACGTTGCTCGCCGC
AAGTTGCAGGACCAGGTTGCTAGGGTTCTGGCCGACGCTCCCTTTCGGGACCCTGCCTGG
GGGGAATTCGGTGACGTTAAGCTCACGGTGGCCTCGCGCGACGGCTTTAAGGTCTCCATG
GATGTGCATCGAAGAGTTCTGGTCGAACAGAGCCGATTCTTTGCGGAGAAGTTGAGGCGG
GACGGCGCCGTGTCGCATTCGGTGGAGATTTGTGATTGTGACGATGTGGAGATTTATGTG
GAGACTGTGGTGTTGATGTATTGCGAGGATTTGAGGAAGAGGTTGATGGGAGAGGAGGTT
TCCAAGGTCTTGGGGTTGCTCAAGGTATCTGCTGCAATCATGTTTGATGCGGGCATCATC
TCATGCTTAGAGTTTTTGGAAGCTGTTCCATGGTCCGAGGATGAAGAGGAGAAAGTTGTA
TCTCATCTTGGTCAACTTCAGCTTCATGACTCGGTGGCTGAAGTTCTCCAGAGAGTATCA
GCTGAACCATCTACATCTACGAGGCCAGATGACATCTTCTTGAGGCTATTGACAGGTATT
TTACAAGCCAAGGATGATAAAGCCCGCCGAGAAATGAAAACTCTGATTTCTCGGTTGCTT
AGAGATGAAGCACCCGACAACAGTGATAGGCATGATGTCTCTAAAGATACCCTCTATCAT
CTATGTCATAGATGTCTGAGTTCCCTTGTCCTTTGCTTATCTGAAGCTACATGCACGGAT
GAAAGCATACGGGATCGAGGGGCTATAATGAGTGAGATAGCTCGTGAAGCTGACAATATG
CAGTGGATTGTCAATATTCTAATTGATAAAAAAATGGGTGAAGATTTTGTGAAACTATGG
GCAGATCAGAAGGAGCTGGCTGTTCTTCATTCCAAGATTCCCACCATGTACAGGCACGAA
ATCAGTAAAATTACTGCACAGCTGTGTATTGCCATTGGAAGAGGACATCTTTTGGTGCCT
AAAGATACCCGTTTCTCTTTGCTATCCACATGGTTGGAAGCTCTCTATGAGGACTTTGCG
TGGATGAGGAGGGCTTGCAGGTCTGTTGACAAGAAATTAGTTGAGGATGGGCTGAGCCAG
ACCATTCTTACATTGCCATTGCCACAGCAACAAGCTATCTTGTTGACTTGGTTTGATCGA
TTTCTTAATAAGGGTGATGACTGTCCCAATATTCAGAGAGCGTTTGAGGTTTGGTGGAGA
AGAGCCTTCATCAGACAGTATGTGTCAGAGCATGATAATTCTCAATTGCAGATTACCGTC
TGTGATTATCCAAACTGA

Peptide Sequence

PEP ID

VIT_06s0004g03710.t01
PEP Infomation

pep chromosome:12X:6:4676213:4678504:1 gene:VIT_06s0004g03710 transcript:VIT_06s0004g03710.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIKQGFISDPTITFSPSRPLSRVSLSPPPPSASPSKSPTLFEMMSEEQSRESRHSDVARR
KLQDQVARVLADAPFRDPAWGEFGDVKLTVASRDGFKVSMDVHRRVLVEQSRFFAEKLRR
DGAVSHSVEICDCDDVEIYVETVVLMYCEDLRKRLMGEEVSKVLGLLKVSAAIMFDAGII
SCLEFLEAVPWSEDEEEKVVSHLGQLQLHDSVAEVLQRVSAEPSTSTRPDDIFLRLLTGI
LQAKDDKARREMKTLISRLLRDEAPDNSDRHDVSKDTLYHLCHRCLSSLVLCLSEATCTD
ESIRDRGAIMSEIAREADNMQWIVNILIDKKMGEDFVKLWADQKELAVLHSKIPTMYRHE
ISKITAQLCIAIGRGHLLVPKDTRFSLLSTWLEALYEDFAWMRRACRSVDKKLVEDGLSQ
TILTLPLPQQQAILLTWFDRFLNKGDDCPNIQRAFEVWWRRAFIRQYVSEHDNSQLQITV
CDYPN

Transcript Sequence

Transcript ID

VIT_06s0004g03710.t01
Transcript Infomation

cdna chromosome:12X:6:4676213:4678504:1 gene:VIT_06s0004g03710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATAAAGCAAGGATTCATCTCTGACCCGACCATCACCTTCTCTCCCTCCAGACCACTT
TCTAGGGTTTCTCTCTCTCCTCCTCCTCCCTCTGCTTCCCCCTCCAAGAGTCCAACTCTC
TTCGAGATGATGTCCGAGGAGCAGAGTCGCGAGTCTAGACACTCCGACGTTGCTCGCCGC
AAGTTGCAGGACCAGGTTGCTAGGGTTCTGGCCGACGCTCCCTTTCGGGACCCTGCCTGG
GGGGAATTCGGTGACGTTAAGCTCACGGTGGCCTCGCGCGACGGCTTTAAGGTCTCCATG
GATGTGCATCGAAGAGTTCTGGTCGAACAGAGCCGATTCTTTGCGGAGAAGTTGAGGCGG
GACGGCGCCGTGTCGCATTCGGTGGAGATTTGTGATTGTGACGATGTGGAGATTTATGTG
GAGACTGTGGTGTTGATGTATTGCGAGGATTTGAGGAAGAGGTTGATGGGAGAGGAGGTT
TCCAAGGTCTTGGGGTTGCTCAAGGTATCTGCTGCAATCATGTTTGATGCGGGCATCATC
TCATGCTTAGAGTTTTTGGAAGCTGTTCCATGGTCCGAGGATGAAGAGGAGAAAGTTGTA
TCTCATCTTGGTCAACTTCAGCTTCATGACTCGGTGGCTGAAGTTCTCCAGAGAGTATCA
GCTGAACCATCTACATCTACGAGGCCAGATGACATCTTCTTGAGGCTATTGACAGGTATT
TTACAAGCCAAGGATGATAAAGCCCGCCGAGAAATGAAAACTCTGATTTCTCGGTTGCTT
AGAGATGAAGCACCCGACAACAGTGATAGGCATGATGTCTCTAAAGATACCCTCTATCAT
CTATGTCATAGATGTCTGAGTTCCCTTGTCCTTTGCTTATCTGAAGCTACATGCACGGAT
GAAAGCATACGGGATCGAGGGGCTATAATGAGTGAGATAGCTCGTGAAGCTGACAATATG
CAGTGGATTGTCAATATTCTAATTGATAAAAAAATGGGTGAAGATTTTGTGAAACTATGG
GCAGATCAGAAGGAGCTGGCTGTTCTTCATTCCAAGATTCCCACCATGTACAGGCACGAA
ATCAGTAAAATTACTGCACAGCTGTGTATTGCCATTGGAAGAGGACATCTTTTGGTGCCT
AAAGATACCCGTTTCTCTTTGCTATCCACATGGTTGGAAGCTCTCTATGAGGACTTTGCG
TGGATGAGGAGGGCTTGCAGGTCTGTTGACAAGAAATTAGTTGAGGATGGGCTGAGCCAG
ACCATTCTTACATTGCCATTGCCACAGCAACAAGCTATCTTGTTGACTTGGTTTGATCGA
TTTCTTAATAAGGGTGATGACTGTCCCAATATTCAGAGAGCGTTTGAGGTTTGGTGGAGA
AGAGCCTTCATCAGACAGTATGTGTCAGAGCATGATAATTCTCAATTGCAGATTACCGTC
TGTGATTATCCAAACTGAATGGTCATTTACCATGTCAAATAATCGAAGCCAAGATGTACA
TATCAAGTGAGGTTCCTTTTGTATCTTTTGCTTAAAATCATTTGATTTTTTTTTGGTCAG
TTTGAATCTTTTAGATATAGATCTCCGTGACAAAAATGA